RNA–Protein interactions for RNA: ENST00000611725.4

SNX13-213, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 6,817 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-213ENST00000611725 MEGF6O75095 1541 aa7.29□□□□□ -1.24
SNX13-213ENST00000611725 GNG11P61952 73 aa7.29□□□□□ -1.24
SNX13-213ENST00000611725 NRBP1Q9UHY1 535 aa7.29□□□□□ -1.24
SNX13-213ENST00000611725 JAG2Q9Y219 1238 aa7.29□□□□□ -1.24
SNX13-213ENST00000611725 PALLDQ8WX93 1383 aa7.29□□□□□ -1.24
SNX13-213ENST00000611725 C6orf229H3BNL8 230 aa7.29□□□□□ -1.24
SNX13-213ENST00000611725 SH2B2O14492 632 aaPredicted RBP7.29□□□□□ -1.24
SNX13-213ENST00000611725 SUSD4Q5VX71 490 aa7.29□□□□□ -1.24
SNX13-213ENST00000611725 TBC1D10CQ8IV04 446 aa7.29□□□□□ -1.24
SNX13-213ENST00000611725 RIOK3O14730 519 aaKnown RBP7.29□□□□□ -1.24
SNX13-213ENST00000611725 RFC4P35249 363 aa7.29□□□□□ -1.24
SNX13-213ENST00000611725 COL9A3Q14050 684 aaPredicted RBP7.29□□□□□ -1.24
SNX13-213ENST00000611725 MLKLQ8NB16 471 aa7.29□□□□□ -1.24
SNX13-213ENST00000611725 CDK5RAP3Q96JB5 506 aa7.29□□□□□ -1.24
SNX13-213ENST00000611725 PYM1Q9BRP8 204 aaKnown RBP7.29□□□□□ -1.24
SNX13-213ENST00000611725 TRIM34Q9BYJ4 488 aa7.29□□□□□ -1.24
SNX13-213ENST00000611725 RTCBQ9Y3I0 505 aaKnown RBP7.29□□□□□ -1.24
SNX13-213ENST00000611725 GOLGA6L9A6NEM1 432 aa7.29□□□□□ -1.24
SNX13-213ENST00000611725 FDPSP14324 419 aaKnown RBP7.29□□□□□ -1.24
SNX13-213ENST00000611725 CALML3P27482 149 aa7.29□□□□□ -1.24
SNX13-213ENST00000611725 EIF5P55010 431 aaKnown RBP7.29□□□□□ -1.24
SNX13-213ENST00000611725 SLC4A8Q2Y0W8 1093 aa7.29□□□□□ -1.24
SNX13-213ENST00000611725 SPECC1Q5M775 1068 aa7.29□□□□□ -1.24
SNX13-213ENST00000611725 CCDC148Q8NFR7 591 aa7.29□□□□□ -1.24
SNX13-213ENST00000611725 NYXQ9GZU5 481 aa7.29□□□□□ -1.24
SNX13-213ENST00000611725 MAGEC2Q9UBF1 373 aaPredicted RBP7.29□□□□□ -1.24
SNX13-213ENST00000611725 ATP2B2Q01814 1243 aa7.28□□□□□ -1.24
SNX13-213ENST00000611725 GPS2Q13227 327 aa7.28□□□□□ -1.24
SNX13-213ENST00000611725 SDR42E1Q8WUS8 393 aa7.28□□□□□ -1.24
SNX13-213ENST00000611725 AK7Q96M32 723 aa7.28□□□□□ -1.24
SNX13-213ENST00000611725 ZNHIT6Q9NWK9 470 aaKnown RBP7.28□□□□□ -1.24
SNX13-213ENST00000611725 hCG_1642624A0A1W2PR95 340 aa7.28□□□□□ -1.24
SNX13-213ENST00000611725 LCORLQ8N3X6 602 aa7.28□□□□□ -1.24
SNX13-213ENST00000611725 C8orf37Q96NL8 207 aa7.28□□□□□ -1.24
SNX13-213ENST00000611725 TCP11L1Q9NUJ3 509 aa7.28□□□□□ -1.24
SNX13-213ENST00000611725 ZSWIM5Q9P217 1185 aa7.28□□□□□ -1.24
SNX13-213ENST00000611725 ABCC12Q96J65 1359 aa7.28□□□□□ -1.24
SNX13-213ENST00000611725 SLU7O95391 586 aaKnown RBP7.28□□□□□ -1.24
SNX13-213ENST00000611725 STX17P56962 302 aa7.28□□□□□ -1.24
SNX13-213ENST00000611725 NLRP12P59046 1061 aa7.28□□□□□ -1.24
SNX13-213ENST00000611725 CCDC24Q8N4L8 307 aa7.28□□□□□ -1.24
SNX13-213ENST00000611725 RPGRQ92834 1020 aaKnown RBP7.28□□□□□ -1.24
SNX13-213ENST00000611725 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.28□□□□□ -1.24
SNX13-213ENST00000611725 V9GYY5 206 aaPredicted RBP7.28□□□□□ -1.24
SNX13-213ENST00000611725 ANTXR2P58335 489 aa7.28□□□□□ -1.24
SNX13-213ENST00000611725 PPP4R3BQ5MIZ7 849 aa7.28□□□□□ -1.24
SNX13-213ENST00000611725 ZNF771Q7L3S4 317 aaPredicted RBP7.28□□□□□ -1.24
SNX13-213ENST00000611725 CCDC12Q8WUD4 166 aaPredicted RBP7.28□□□□□ -1.24
SNX13-213ENST00000611725 PKNOX2Q96KN3 472 aa7.28□□□□□ -1.24
SNX13-213ENST00000611725 CBX1P83916 185 aa7.27□□□□□ -1.24
SNX13-213ENST00000611725 KRBA2Q6ZNG9 492 aa7.27□□□□□ -1.24
SNX13-213ENST00000611725 CMTR1Q8N1G2 835 aaKnown RBP7.27□□□□□ -1.24
SNX13-213ENST00000611725 CLIC6Q96NY7 704 aa7.27□□□□□ -1.24
SNX13-213ENST00000611725 SEC63Q9UGP8 760 aaKnown RBP7.27□□□□□ -1.24
SNX13-213ENST00000611725 CCNL1Q9UK58 526 aaPredicted RBP7.27□□□□□ -1.24
SNX13-213ENST00000611725 MST1RQ04912 1400 aa7.27□□□□□ -1.24
SNX13-213ENST00000611725 WDR19Q8NEZ3 1342 aa7.27□□□□□ -1.25
SNX13-213ENST00000611725 RBM6P78332 1123 aaKnown RBP7.27□□□□□ -1.25
SNX13-213ENST00000611725 ZNF827Q17R98 1081 aa7.27□□□□□ -1.25
SNX13-213ENST00000611725 FAM98CQ17RN3 349 aaKnown RBP7.27□□□□□ -1.25
SNX13-213ENST00000611725 RRAGBQ5VZM2 374 aa7.27□□□□□ -1.25
SNX13-213ENST00000611725 SGMS1Q86VZ5 419 aa7.27□□□□□ -1.25
SNX13-213ENST00000611725 MTA3Q9BTC8 594 aa7.27□□□□□ -1.25
SNX13-213ENST00000611725 AGXT2Q9BYV1 514 aa7.27□□□□□ -1.25
SNX13-213ENST00000611725 VPS54Q9P1Q0 977 aa7.27□□□□□ -1.25
SNX13-213ENST00000611725 SSBP05455 408 aaKnown RBP eCLIP7.27□□□□□ -1.25
SNX13-213ENST00000611725 LDHBP07195 334 aaKnown RBP7.27□□□□□ -1.25
SNX13-213ENST00000611725 TFCP2L1Q9NZI6 479 aa7.27□□□□□ -1.25
SNX13-213ENST00000611725 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.27□□□□□ -1.25
SNX13-213ENST00000611725 A0A0G2JLW4 131 aa7.27□□□□□ -1.25
SNX13-213ENST00000611725 UBAP1LF5GYI3 381 aa7.27□□□□□ -1.25
SNX13-213ENST00000611725 POLR2DO15514 142 aaKnown RBP7.27□□□□□ -1.25
SNX13-213ENST00000611725 TSPY3P0CV98 308 aa7.27□□□□□ -1.25
SNX13-213ENST00000611725 TSPY8P0CW00 308 aa7.27□□□□□ -1.25
SNX13-213ENST00000611725 IDEP14735 1019 aa7.27□□□□□ -1.25
SNX13-213ENST00000611725 ALX1Q15699 326 aa7.27□□□□□ -1.25
SNX13-213ENST00000611725 CCDC178Q5BJE1 867 aa7.27□□□□□ -1.25
SNX13-213ENST00000611725 TMCO3Q6UWJ1 677 aa7.27□□□□□ -1.25
SNX13-213ENST00000611725 BMP2KQ9NSY1 1161 aaPredicted RBP7.27□□□□□ -1.25
SNX13-213ENST00000611725 LMTK3Q96Q04 1460 aa7.27□□□□□ -1.25
SNX13-213ENST00000611725 VWA3AA6NCI4 1184 aa7.27□□□□□ -1.25
SNX13-213ENST00000611725 KRT2P35908 639 aa7.27□□□□□ -1.25
SNX13-213ENST00000611725 GSTO1P78417 241 aa7.27□□□□□ -1.25
SNX13-213ENST00000611725 ZNF174Q15697 407 aa7.27□□□□□ -1.25
SNX13-213ENST00000611725 TEX35Q5T0J7 233 aa7.27□□□□□ -1.25
SNX13-213ENST00000611725 SARM1Q6SZW1 724 aa7.27□□□□□ -1.25
SNX13-213ENST00000611725 FMR1NBQ8N0W7 255 aaPredicted RBP7.27□□□□□ -1.25
SNX13-213ENST00000611725 CGNQ9P2M7 1197 aaKnown RBP7.27□□□□□ -1.25
SNX13-213ENST00000611725 IMPACTQ9P2X3 320 aa7.27□□□□□ -1.25
SNX13-213ENST00000611725 CTDNEP1O95476 244 aa7.27□□□□□ -1.25
SNX13-213ENST00000611725 KIF4BQ2VIQ3 1234 aa7.27□□□□□ -1.25
SNX13-213ENST00000611725 SLF2Q8IX21 1173 aa7.27□□□□□ -1.25
SNX13-213ENST00000611725 TIGD1Q96MW7 591 aa7.27□□□□□ -1.25
SNX13-213ENST00000611725 FUCA2Q9BTY2 467 aa7.27□□□□□ -1.25
SNX13-213ENST00000611725 RNF26Q9BY78 433 aaPredicted RBP7.27□□□□□ -1.25
SNX13-213ENST00000611725 RBM28Q9NW13 759 aaKnown RBP7.27□□□□□ -1.25
SNX13-213ENST00000611725 IKQ13123 557 aaPredicted RBP7.26□□□□□ -1.25
SNX13-213ENST00000611725 HSP90B2PQ58FF3 399 aa7.26□□□□□ -1.25
SNX13-213ENST00000611725 SYT10Q6XYQ8 523 aa7.26□□□□□ -1.25
SNX13-213ENST00000611725 LRP10Q7Z4F1 713 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms