RNA–Protein interactions for RNA: ENST00000609021.1

HDDC2-208, Transcript of HD domain containing 2, humanhuman

Gene HDDC2, Length 3,529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-208ENST00000609021 GPR101Q96P66 508 aaPredicted RBP5.36□□□□□ -1.55
HDDC2-208ENST00000609021 IFT122Q9HBG6 1241 aa5.36□□□□□ -1.55
HDDC2-208ENST00000609021 AASDHPPTQ9NRN7 309 aa5.36□□□□□ -1.55
HDDC2-208ENST00000609021 HDAC9Q9UKV0 1011 aa5.36□□□□□ -1.55
HDDC2-208ENST00000609021 SENP3-EIF4A1A0A087X0R7 540 aa5.36□□□□□ -1.55
HDDC2-208ENST00000609021 ELL2O00472 640 aaPredicted RBP5.36□□□□□ -1.55
HDDC2-208ENST00000609021 SLC27A2O14975 620 aa5.36□□□□□ -1.55
HDDC2-208ENST00000609021 PPP1R12BO60237 982 aaPredicted RBP5.36□□□□□ -1.55
HDDC2-208ENST00000609021 MBD3O95983 291 aa5.36□□□□□ -1.55
HDDC2-208ENST00000609021 ALOX15P16050 662 aaPredicted RBP5.36□□□□□ -1.55
HDDC2-208ENST00000609021 DCTN1Q14203 1278 aa5.36□□□□□ -1.55
HDDC2-208ENST00000609021 PPP2R5BQ15173 497 aa5.36□□□□□ -1.55
HDDC2-208ENST00000609021 PTPN14Q15678 1187 aa5.36□□□□□ -1.55
HDDC2-208ENST00000609021 IMMTQ16891 758 aaKnown RBP5.36□□□□□ -1.55
HDDC2-208ENST00000609021 THOC7Q6I9Y2 204 aaKnown RBP5.36□□□□□ -1.55
HDDC2-208ENST00000609021 CENPTQ96BT3 561 aa5.36□□□□□ -1.55
HDDC2-208ENST00000609021 GSDMAQ96QA5 445 aa5.36□□□□□ -1.55
HDDC2-208ENST00000609021 SLX1AQ9BQ83 275 aa5.36□□□□□ -1.55
HDDC2-208ENST00000609021 CDCA7Q9BWT1 371 aaPredicted RBP5.36□□□□□ -1.55
HDDC2-208ENST00000609021 NRDE2Q9H7Z3 1164 aa5.36□□□□□ -1.55
HDDC2-208ENST00000609021 SENP2Q9HC62 589 aa5.36□□□□□ -1.55
HDDC2-208ENST00000609021 ZNF304Q9HCX3 659 aa5.36□□□□□ -1.55
HDDC2-208ENST00000609021 ZCCHC17Q9NP64 241 aaKnown RBP5.36□□□□□ -1.55
HDDC2-208ENST00000609021 MRGBPQ9NV56 204 aa5.36□□□□□ -1.55
HDDC2-208ENST00000609021 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.36□□□□□ -1.55
HDDC2-208ENST00000609021 CAPN7Q9Y6W3 813 aa5.36□□□□□ -1.55
HDDC2-208ENST00000609021 ADGRL1O94910 1474 aa5.36□□□□□ -1.55
HDDC2-208ENST00000609021 FERP16591 822 aa5.35□□□□□ -1.55
HDDC2-208ENST00000609021 DYNC1I2Q13409 638 aaKnown RBP5.35□□□□□ -1.55
HDDC2-208ENST00000609021 INAQ16352 499 aa5.35□□□□□ -1.55
HDDC2-208ENST00000609021 ALDH1L2Q3SY69 923 aa5.35□□□□□ -1.55
HDDC2-208ENST00000609021 SH2D4BQ5SQS7 431 aa5.35□□□□□ -1.55
HDDC2-208ENST00000609021 PACS1Q6VY07 963 aa5.35□□□□□ -1.55
HDDC2-208ENST00000609021 FLCNQ8NFG4 579 aa5.35□□□□□ -1.55
HDDC2-208ENST00000609021 LMBR1Q8WVP7 490 aa5.35□□□□□ -1.55
HDDC2-208ENST00000609021 NACC2Q96BF6 587 aa5.35□□□□□ -1.55
HDDC2-208ENST00000609021 TBC1D32Q96NH3 1257 aa5.35□□□□□ -1.55
HDDC2-208ENST00000609021 BRD8Q9H0E9 1235 aa5.35□□□□□ -1.55
HDDC2-208ENST00000609021 VPS18Q9P253 973 aa5.35□□□□□ -1.55
HDDC2-208ENST00000609021 DNAI1Q9UI46 699 aa5.35□□□□□ -1.55
HDDC2-208ENST00000609021 CNTLNQ9NXG0 1405 aa5.35□□□□□ -1.55
HDDC2-208ENST00000609021 FER1L4A9Z1Z3 1794 aa5.35□□□□□ -1.55
HDDC2-208ENST00000609021 LDHAP00338 332 aaKnown RBP5.35□□□□□ -1.55
HDDC2-208ENST00000609021 SLC8A1P32418 973 aa5.35□□□□□ -1.55
HDDC2-208ENST00000609021 EIF4A2Q14240 407 aaKnown RBP5.35□□□□□ -1.55
HDDC2-208ENST00000609021 RAB3GAP1Q15042 981 aa5.35□□□□□ -1.55
HDDC2-208ENST00000609021 LRRFIP1Q32MZ4 808 aaKnown RBP5.35□□□□□ -1.55
HDDC2-208ENST00000609021 SPATS2Q86XZ4 545 aaKnown RBP5.35□□□□□ -1.55
HDDC2-208ENST00000609021 BICD2Q8TD16 824 aa5.35□□□□□ -1.55
HDDC2-208ENST00000609021 NEK1Q96PY6 1258 aa5.35□□□□□ -1.55
HDDC2-208ENST00000609021 CD248Q9HCU0 757 aa5.35□□□□□ -1.55
HDDC2-208ENST00000609021 A2MP01023 1474 aa5.35□□□□□ -1.55
HDDC2-208ENST00000609021 NDUFAB1O14561 156 aa5.35□□□□□ -1.55
HDDC2-208ENST00000609021 ZSCAN12O43309 604 aa5.35□□□□□ -1.55
HDDC2-208ENST00000609021 RTN2O75298 545 aa5.35□□□□□ -1.55
HDDC2-208ENST00000609021 TUBA1BP68363 451 aa5.35□□□□□ -1.55
HDDC2-208ENST00000609021 GNL2Q13823 731 aaKnown RBP5.35□□□□□ -1.55
HDDC2-208ENST00000609021 C4orf46Q504U0 113 aa5.35□□□□□ -1.55
HDDC2-208ENST00000609021 ARHGAP29Q52LW3 1261 aa5.35□□□□□ -1.55
HDDC2-208ENST00000609021 SPECC1Q5M775 1068 aa5.35□□□□□ -1.55
HDDC2-208ENST00000609021 KAZNQ674X7 775 aa5.35□□□□□ -1.55
HDDC2-208ENST00000609021 LLGL2Q6P1M3 1020 aa5.35□□□□□ -1.55
HDDC2-208ENST00000609021 TUBA1AQ71U36 451 aa5.35□□□□□ -1.55
HDDC2-208ENST00000609021 SMARCC1Q92922 1105 aaPredicted RBP5.35□□□□□ -1.55
HDDC2-208ENST00000609021 GCC1Q96CN9 775 aa5.35□□□□□ -1.55
HDDC2-208ENST00000609021 DDX27Q96GQ7 796 aaKnown RBP5.35□□□□□ -1.55
HDDC2-208ENST00000609021 RPS6KC1Q96S38 1066 aa5.35□□□□□ -1.55
HDDC2-208ENST00000609021 ARFGAP3Q9NP61 516 aa5.35□□□□□ -1.55
HDDC2-208ENST00000609021 HOOK1Q9UJC3 728 aaKnown RBP5.35□□□□□ -1.55
HDDC2-208ENST00000609021 ZNF652Q9Y2D9 606 aa5.35□□□□□ -1.55
HDDC2-208ENST00000609021 FAN1Q9Y2M0 1017 aa5.35□□□□□ -1.55
HDDC2-208ENST00000609021 SETBP1Q9Y6X0 1596 aa5.34□□□□□ -1.55
HDDC2-208ENST00000609021 PTPRCP08575 1304 aa5.34□□□□□ -1.55
HDDC2-208ENST00000609021 TARSL2A2RTX5 802 aaKnown RBP5.34□□□□□ -1.55
HDDC2-208ENST00000609021 MBD4O95243 580 aa5.34□□□□□ -1.55
HDDC2-208ENST00000609021 PLA2G4AP47712 749 aa5.34□□□□□ -1.55
HDDC2-208ENST00000609021 TUFMP49411 452 aaKnown RBP5.34□□□□□ -1.55
HDDC2-208ENST00000609021 ITIH3Q06033 890 aa5.34□□□□□ -1.55
HDDC2-208ENST00000609021 DDR1Q08345 913 aa5.34□□□□□ -1.55
HDDC2-208ENST00000609021 G3BP1Q13283 466 aaKnown RBP eCLIP5.34□□□□□ -1.55
HDDC2-208ENST00000609021 PTK7Q13308 1070 aa5.34□□□□□ -1.55
HDDC2-208ENST00000609021 ARHGEF6Q15052 776 aa5.34□□□□□ -1.55
HDDC2-208ENST00000609021 CWF19L1Q69YN2 538 aaKnown RBP5.34□□□□□ -1.55
HDDC2-208ENST00000609021 ATF7IPQ6VMQ6 1270 aa5.34□□□□□ -1.55
HDDC2-208ENST00000609021 CEP128Q6ZU80 1094 aa5.34□□□□□ -1.55
HDDC2-208ENST00000609021 TRIM58Q8NG06 486 aa5.34□□□□□ -1.55
HDDC2-208ENST00000609021 SUN5Q8TC36 379 aa5.34□□□□□ -1.55
HDDC2-208ENST00000609021 NR1H4Q96RI1 486 aaPredicted RBP5.34□□□□□ -1.55
HDDC2-208ENST00000609021 CORO1BQ9BR76 489 aa5.34□□□□□ -1.55
HDDC2-208ENST00000609021 CROTQ9UKG9 612 aa5.34□□□□□ -1.55
HDDC2-208ENST00000609021 SATB2Q9UPW6 733 aa5.34□□□□□ -1.55
HDDC2-208ENST00000609021 MAPK8IP1Q9UQF2 711 aa5.34□□□□□ -1.55
HDDC2-208ENST00000609021 NOS1P29475 1434 aa5.34□□□□□ -1.55
HDDC2-208ENST00000609021 SPDYE3A6NKU9 549 aa5.34□□□□□ -1.55
HDDC2-208ENST00000609021 PLIN1O60240 522 aa5.34□□□□□ -1.55
HDDC2-208ENST00000609021 MCM2P49736 904 aa5.34□□□□□ -1.55
HDDC2-208ENST00000609021 HDAC4P56524 1084 aa5.34□□□□□ -1.55
HDDC2-208ENST00000609021 NMIQ13287 307 aaPredicted RBP5.34□□□□□ -1.55
HDDC2-208ENST00000609021 CCDC38Q502W7 563 aa5.34□□□□□ -1.55
HDDC2-208ENST00000609021 CCDC174Q6PII3 467 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms