RNA–Protein interactions for RNA: ENST00000608532.1

HDDC2-207, Transcript of HD domain containing 2, humanhuman

TSL 3

Gene HDDC2, Length 553 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-207ENST00000608532 PCDHGC5Q9Y5F6 944 aa7.84□□□□□ -1.15
HDDC2-207ENST00000608532 FAM170BA6NMN3 283 aa7.83□□□□□ -1.16
HDDC2-207ENST00000608532 DCDC2CA8MYV0 355 aa7.83□□□□□ -1.16
HDDC2-207ENST00000608532 COBLO75128 1261 aa7.83□□□□□ -1.16
HDDC2-207ENST00000608532 ERCC3P19447 782 aa7.83□□□□□ -1.16
HDDC2-207ENST00000608532 GRIK1P39086 918 aa7.83□□□□□ -1.16
HDDC2-207ENST00000608532 DAB2P98082 770 aa7.83□□□□□ -1.16
HDDC2-207ENST00000608532 TMCO4Q5TGY1 634 aa7.83□□□□□ -1.16
HDDC2-207ENST00000608532 ANKRD24Q8TF21 1146 aa7.83□□□□□ -1.16
HDDC2-207ENST00000608532 MRS2Q9HD23 443 aa7.83□□□□□ -1.16
HDDC2-207ENST00000608532 PCDHA4Q9UN74 947 aa7.83□□□□□ -1.16
HDDC2-207ENST00000608532 LEMD3Q9Y2U8 911 aa7.83□□□□□ -1.16
HDDC2-207ENST00000608532 PRR19A6NJB7 356 aa7.82□□□□□ -1.16
HDDC2-207ENST00000608532 TRIM37O94972 964 aa7.82□□□□□ -1.16
HDDC2-207ENST00000608532 LMNB1P20700 586 aa7.82□□□□□ -1.16
HDDC2-207ENST00000608532 ZC3H12AQ5D1E8 599 aaKnown RBP7.82□□□□□ -1.16
HDDC2-207ENST00000608532 XP32Q5T750 250 aa7.82□□□□□ -1.16
HDDC2-207ENST00000608532 TTBK2Q6IQ55 1244 aa7.82□□□□□ -1.16
HDDC2-207ENST00000608532 ZAR1Q86SH2 424 aa7.82□□□□□ -1.16
HDDC2-207ENST00000608532 NBPF11Q86T75 865 aa7.82□□□□□ -1.16
HDDC2-207ENST00000608532 SMYD4Q8IYR2 804 aaPredicted RBP7.82□□□□□ -1.16
HDDC2-207ENST00000608532 VTI1BQ9UEU0 232 aa7.82□□□□□ -1.16
HDDC2-207ENST00000608532 CYP8B1Q9UNU6 501 aa7.82□□□□□ -1.16
HDDC2-207ENST00000608532 MED26O95402 600 aa7.81□□□□□ -1.16
HDDC2-207ENST00000608532 PPM1JQ5JR12 505 aa7.81□□□□□ -1.16
HDDC2-207ENST00000608532 TMC4Q7Z404 712 aa7.81□□□□□ -1.16
HDDC2-207ENST00000608532 C12orf40Q86WS4 652 aa7.81□□□□□ -1.16
HDDC2-207ENST00000608532 BCL2L13Q9BXK5 485 aa7.81□□□□□ -1.16
HDDC2-207ENST00000608532 PIM2Q9P1W9 311 aa7.81□□□□□ -1.16
HDDC2-207ENST00000608532 SORBS3O60504 671 aa7.8□□□□□ -1.16
HDDC2-207ENST00000608532 CDK5R2Q13319 367 aa7.8□□□□□ -1.16
HDDC2-207ENST00000608532 DUSP27Q5VZP5 1158 aa7.8□□□□□ -1.16
HDDC2-207ENST00000608532 ELMO3Q96BJ8 720 aa7.8□□□□□ -1.16
HDDC2-207ENST00000608532 C1GALT1Q9NS00 363 aa7.8□□□□□ -1.16
HDDC2-207ENST00000608532 NEFMP07197 916 aa7.79□□□□□ -1.16
HDDC2-207ENST00000608532 HOXA10P31260 410 aaPredicted RBP7.79□□□□□ -1.16
HDDC2-207ENST00000608532 CD97P48960 835 aa7.79□□□□□ -1.16
HDDC2-207ENST00000608532 ERVK-24P63145 666 aa7.79□□□□□ -1.16
HDDC2-207ENST00000608532 PTPN11Q06124 597 aaPredicted RBP7.79□□□□□ -1.16
HDDC2-207ENST00000608532 TAF1CQ15572 869 aaPredicted RBP7.79□□□□□ -1.16
HDDC2-207ENST00000608532 INTS5Q6P9B9 1019 aaKnown RBP7.79□□□□□ -1.16
HDDC2-207ENST00000608532 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.79□□□□□ -1.16
HDDC2-207ENST00000608532 RNF214Q8ND24 703 aa7.79□□□□□ -1.16
HDDC2-207ENST00000608532 GIPC2Q8TF65 315 aa7.79□□□□□ -1.16
HDDC2-207ENST00000608532 GATA6Q92908 595 aa7.79□□□□□ -1.16
HDDC2-207ENST00000608532 ISL2Q96A47 359 aa7.79□□□□□ -1.16
HDDC2-207ENST00000608532 METTL22Q9BUU2 404 aaPredicted RBP7.79□□□□□ -1.16
HDDC2-207ENST00000608532 LRRC4CQ9HCJ2 640 aa7.79□□□□□ -1.16
HDDC2-207ENST00000608532 PCOLCE2Q9UKZ9 415 aa7.79□□□□□ -1.16
HDDC2-207ENST00000608532 CYP26A1O43174 497 aa7.78□□□□□ -1.16
HDDC2-207ENST00000608532 CTSHP09668 335 aa7.78□□□□□ -1.16
HDDC2-207ENST00000608532 SEZ6L2Q6UXD5 910 aa7.78□□□□□ -1.16
HDDC2-207ENST00000608532 ZNF765Q7L2R6 523 aa7.78□□□□□ -1.16
HDDC2-207ENST00000608532 CACNA2D2Q9NY47 1150 aa7.78□□□□□ -1.16
HDDC2-207ENST00000608532 PCDHB5Q9Y5E4 795 aa7.78□□□□□ -1.16
HDDC2-207ENST00000608532 PRAMEF27A3QJZ7 478 aa7.77□□□□□ -1.17
HDDC2-207ENST00000608532 F6X3S4 739 aa7.77□□□□□ -1.17
HDDC2-207ENST00000608532 FAM87AP0C7U9 286 aa7.77□□□□□ -1.17
HDDC2-207ENST00000608532 LIG3P49916 1009 aa7.77□□□□□ -1.17
HDDC2-207ENST00000608532 CYP27A1Q02318 531 aa7.77□□□□□ -1.17
HDDC2-207ENST00000608532 SEPT6Q14141 434 aa7.77□□□□□ -1.17
HDDC2-207ENST00000608532 INPP5AQ14642 412 aa7.77□□□□□ -1.17
HDDC2-207ENST00000608532 FOSL1P15407 271 aa7.76□□□□□ -1.17
HDDC2-207ENST00000608532 ZNF326Q5BKZ1 582 aaKnown RBP7.76□□□□□ -1.17
HDDC2-207ENST00000608532 LRFN4Q6PJG9 635 aa7.76□□□□□ -1.17
HDDC2-207ENST00000608532 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.76□□□□□ -1.17
HDDC2-207ENST00000608532 CDC37L1Q7L3B6 337 aa7.76□□□□□ -1.17
HDDC2-207ENST00000608532 CRELD1Q96HD1 420 aa7.76□□□□□ -1.17
HDDC2-207ENST00000608532 CPSF6Q16630 551 aaKnown RBP eCLIP7.75□□□□□ -1.17
HDDC2-207ENST00000608532 WIPI1Q5MNZ9 446 aaPredicted RBP7.75□□□□□ -1.17
HDDC2-207ENST00000608532 SCARA3Q6AZY7 606 aa7.75□□□□□ -1.17
HDDC2-207ENST00000608532 OGFOD3Q6PK18 319 aa7.75□□□□□ -1.17
HDDC2-207ENST00000608532 HDXQ7Z353 690 aa7.75□□□□□ -1.17
HDDC2-207ENST00000608532 GAL3ST3Q96A11 431 aa7.75□□□□□ -1.17
HDDC2-207ENST00000608532 PLPPR2Q96GM1 343 aa7.75□□□□□ -1.17
HDDC2-207ENST00000608532 ITGAEP38570 1179 aa7.74□□□□□ -1.17
HDDC2-207ENST00000608532 CDK8P49336 464 aa7.74□□□□□ -1.17
HDDC2-207ENST00000608532 ST13P50502 369 aaKnown RBP7.74□□□□□ -1.17
HDDC2-207ENST00000608532 MFAP1P55081 439 aaKnown RBP7.74□□□□□ -1.17
HDDC2-207ENST00000608532 RPS26P62854 115 aaKnown RBP7.74□□□□□ -1.17
HDDC2-207ENST00000608532 CYP27C1Q4G0S4 372 aa7.74□□□□□ -1.17
HDDC2-207ENST00000608532 AGMOQ6ZNB7 445 aa7.74□□□□□ -1.17
HDDC2-207ENST00000608532 UBE3DQ7Z6J8 389 aa7.74□□□□□ -1.17
HDDC2-207ENST00000608532 TOP6BLQ8N6T0 577 aa7.74□□□□□ -1.17
HDDC2-207ENST00000608532 JARID2Q92833 1246 aaPredicted RBP7.74□□□□□ -1.17
HDDC2-207ENST00000608532 MIR1-1HGQ9H1L0 117 aa7.74□□□□□ -1.17
HDDC2-207ENST00000608532 TLR6Q9Y2C9 796 aa7.74□□□□□ -1.17
HDDC2-207ENST00000608532 USP31Q70CQ4 1352 aa7.73□□□□□ -1.17
HDDC2-207ENST00000608532 KIAA1324LA8MWY0 1029 aaPredicted RBP7.73□□□□□ -1.17
HDDC2-207ENST00000608532 FANCGO15287 622 aa7.73□□□□□ -1.17
HDDC2-207ENST00000608532 LEFTY1O75610 366 aa7.73□□□□□ -1.17
HDDC2-207ENST00000608532 SPINK2P20155 84 aa7.73□□□□□ -1.17
HDDC2-207ENST00000608532 ZBTB37Q5TC79 503 aa7.73□□□□□ -1.17
HDDC2-207ENST00000608532 NOC4LQ9BVI4 516 aaKnown RBP7.73□□□□□ -1.17
HDDC2-207ENST00000608532 RLBP1P12271 317 aa7.72□□□□□ -1.17
HDDC2-207ENST00000608532 TFE3P19532 575 aaPredicted RBP7.72□□□□□ -1.17
HDDC2-207ENST00000608532 NTF4P34130 210 aa7.72□□□□□ -1.17
HDDC2-207ENST00000608532 ETF1P62495 437 aaKnown RBP7.72□□□□□ -1.17
HDDC2-207ENST00000608532 DTX1Q86Y01 620 aa7.72□□□□□ -1.17
HDDC2-207ENST00000608532 ZNF507Q8TCN5 953 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms