RNA–Protein interactions for RNA: ENST00000601372.5

ZNF558-207, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 2 BASIC

Gene ZNF558, Length 7,032 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-207ENST00000601372 ZNF532Q9HCE3 1301 aa12.64□□□□□ -0.39
ZNF558-207ENST00000601372 CALM1P0DP23 149 aa12.64□□□□□ -0.39
ZNF558-207ENST00000601372 CALM2P0DP24 149 aa12.64□□□□□ -0.39
ZNF558-207ENST00000601372 CALM3P0DP25 149 aa12.64□□□□□ -0.39
ZNF558-207ENST00000601372 AXDND1Q5T1B0 1012 aaPredicted RBP12.64□□□□□ -0.39
ZNF558-207ENST00000601372 CERS3Q8IU89 383 aa12.64□□□□□ -0.39
ZNF558-207ENST00000601372 CGNQ9P2M7 1197 aaKnown RBP12.64□□□□□ -0.39
ZNF558-207ENST00000601372 EIF5P55010 431 aaKnown RBP12.63□□□□□ -0.39
ZNF558-207ENST00000601372 LEMD3Q9Y2U8 911 aa12.63□□□□□ -0.39
ZNF558-207ENST00000601372 IRX3P78415 501 aaPredicted RBP12.63□□□□□ -0.39
ZNF558-207ENST00000601372 TMC4Q7Z404 712 aa12.63□□□□□ -0.39
ZNF558-207ENST00000601372 GPR101Q96P66 508 aaPredicted RBP12.63□□□□□ -0.39
ZNF558-207ENST00000601372 SPDYE3A6NKU9 549 aa12.63□□□□□ -0.39
ZNF558-207ENST00000601372 POLR3GO15318 223 aaPredicted RBP12.63□□□□□ -0.39
ZNF558-207ENST00000601372 AFMP43652 599 aa12.63□□□□□ -0.39
ZNF558-207ENST00000601372 ARHGAP29Q52LW3 1261 aa12.63□□□□□ -0.39
ZNF558-207ENST00000601372 ERCC4Q92889 916 aaPredicted RBP12.63□□□□□ -0.39
ZNF558-207ENST00000601372 RNF181Q9P0P0 153 aa12.63□□□□□ -0.39
ZNF558-207ENST00000601372 SKILP12757 684 aa12.63□□□□□ -0.39
ZNF558-207ENST00000601372 HSPA4P34932 840 aa12.63□□□□□ -0.39
ZNF558-207ENST00000601372 ZNF445P59923 1031 aa12.63□□□□□ -0.39
ZNF558-207ENST00000601372 DEFB132Q7Z7B7 95 aa12.63□□□□□ -0.39
ZNF558-207ENST00000601372 USP44Q9H0E7 712 aa12.63□□□□□ -0.39
ZNF558-207ENST00000601372 RAD50Q92878 1312 aa12.63□□□□□ -0.39
ZNF558-207ENST00000601372 PAF1Q8N7H5 531 aa12.63□□□□□ -0.39
ZNF558-207ENST00000601372 MRPS27Q92552 414 aaKnown RBP12.63□□□□□ -0.39
ZNF558-207ENST00000601372 CARMIL3Q8ND23 1372 aa12.63□□□□□ -0.39
ZNF558-207ENST00000601372 MARCH10Q8NA82 808 aaPredicted RBP12.62□□□□□ -0.39
ZNF558-207ENST00000601372 NUP88Q99567 741 aaPredicted RBP12.62□□□□□ -0.39
ZNF558-207ENST00000601372 ADRA2BP18089 450 aa12.62□□□□□ -0.39
ZNF558-207ENST00000601372 GPAA1O43292 621 aa12.62□□□□□ -0.39
ZNF558-207ENST00000601372 ZSCAN12O43309 604 aa12.62□□□□□ -0.39
ZNF558-207ENST00000601372 CCDC181Q5TID7 509 aa12.62□□□□□ -0.39
ZNF558-207ENST00000601372 CCDC66A2RUB6 948 aa12.62□□□□□ -0.39
ZNF558-207ENST00000601372 CCDC102AQ96A19 550 aa12.62□□□□□ -0.39
ZNF558-207ENST00000601372 PRIMPOLQ96LW4 560 aa12.62□□□□□ -0.39
ZNF558-207ENST00000601372 CYP19A1P11511 503 aaPredicted RBP12.62□□□□□ -0.39
ZNF558-207ENST00000601372 SP4Q02446 784 aa12.62□□□□□ -0.39
ZNF558-207ENST00000601372 GRAPQ13588 217 aa12.62□□□□□ -0.39
ZNF558-207ENST00000601372 GRAPLQ8TC17 118 aaPredicted RBP12.62□□□□□ -0.39
ZNF558-207ENST00000601372 NCOA3Q9Y6Q9 1424 aa12.62□□□□□ -0.39
ZNF558-207ENST00000601372 A0A1B0GVL5 298 aa12.62□□□□□ -0.39
ZNF558-207ENST00000601372 JAK2O60674 1132 aa12.62□□□□□ -0.39
ZNF558-207ENST00000601372 NOM1Q5C9Z4 860 aaKnown RBP12.62□□□□□ -0.39
ZNF558-207ENST00000601372 TMCO3Q6UWJ1 677 aa12.62□□□□□ -0.39
ZNF558-207ENST00000601372 LEKR1Q6ZMV7 388 aa12.62□□□□□ -0.39
ZNF558-207ENST00000601372 ZSWIM4Q9H7M6 989 aa12.62□□□□□ -0.39
ZNF558-207ENST00000601372 USP31Q70CQ4 1352 aa12.62□□□□□ -0.39
ZNF558-207ENST00000601372 PPP1R12BO60237 982 aaPredicted RBP12.61□□□□□ -0.39
ZNF558-207ENST00000601372 UBASH3AP57075 661 aa12.61□□□□□ -0.39
ZNF558-207ENST00000601372 CTDSPL2Q05D32 466 aa12.61□□□□□ -0.39
ZNF558-207ENST00000601372 ME3Q16798 604 aa12.61□□□□□ -0.39
ZNF558-207ENST00000601372 PUS3Q9BZE2 481 aaKnown RBP12.61□□□□□ -0.39
ZNF558-207ENST00000601372 MYO5BQ9ULV0 1848 aa12.61□□□□□ -0.39
ZNF558-207ENST00000601372 GSDMDP57764 484 aa12.61□□□□□ -0.39
ZNF558-207ENST00000601372 DCAF15Q66K64 600 aa12.61□□□□□ -0.39
ZNF558-207ENST00000601372 AS3MTQ9HBK9 375 aa12.61□□□□□ -0.39
ZNF558-207ENST00000601372 BTDP43251 543 aa12.61□□□□□ -0.39
ZNF558-207ENST00000601372 KIF22Q14807 665 aa12.61□□□□□ -0.39
ZNF558-207ENST00000601372 APPBP2Q92624 585 aa12.61□□□□□ -0.39
ZNF558-207ENST00000601372 DCCP43146 1447 aa12.61□□□□□ -0.39
ZNF558-207ENST00000601372 CIAPIN1Q6FI81 312 aa12.61□□□□□ -0.39
ZNF558-207ENST00000601372 CCDC148Q8NFR7 591 aa12.61□□□□□ -0.39
ZNF558-207ENST00000601372 CALML4Q96GE6 196 aa12.61□□□□□ -0.39
ZNF558-207ENST00000601372 DEPDC5O75140 1603 aa12.61□□□□□ -0.39
ZNF558-207ENST00000601372 AOX1Q06278 1338 aa12.61□□□□□ -0.39
ZNF558-207ENST00000601372 NRXN1Q9ULB1 1477 aa12.61□□□□□ -0.39
ZNF558-207ENST00000601372 TRIM21P19474 475 aaKnown RBP12.61□□□□□ -0.39
ZNF558-207ENST00000601372 MED14O60244 1454 aa12.61□□□□□ -0.39
ZNF558-207ENST00000601372 MKRN3Q13064 507 aaKnown RBP12.6□□□□□ -0.39
ZNF558-207ENST00000601372 CCDC102BQ68D86 513 aa12.6□□□□□ -0.39
ZNF558-207ENST00000601372 OTUD7BQ6GQQ9 843 aa12.6□□□□□ -0.39
ZNF558-207ENST00000601372 CLEC4GQ6UXB4 293 aa12.6□□□□□ -0.39
ZNF558-207ENST00000601372 DHX32Q7L7V1 743 aaKnown RBP12.6□□□□□ -0.39
ZNF558-207ENST00000601372 PNPLA6Q8IY17 1366 aa12.6□□□□□ -0.39
ZNF558-207ENST00000601372 IBTKQ9P2D0 1353 aaPredicted RBP12.6□□□□□ -0.39
ZNF558-207ENST00000601372 MST1RQ04912 1400 aa12.6□□□□□ -0.39
ZNF558-207ENST00000601372 B4E1Z4 1266 aa12.6□□□□□ -0.39
ZNF558-207ENST00000601372 PRDM1O75626 825 aa12.6□□□□□ -0.39
ZNF558-207ENST00000601372 PAGR1Q9BTK6 254 aa12.6□□□□□ -0.39
ZNF558-207ENST00000601372 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.6□□□□□ -0.399e-13■■■■■ 192.3
ZNF558-207ENST00000601372 HOMER2Q9NSB8 354 aa12.6□□□□□ -0.39
ZNF558-207ENST00000601372 TCP11L1Q9NUJ3 509 aa12.6□□□□□ -0.39
ZNF558-207ENST00000601372 CWC15Q9P013 229 aaKnown RBP12.6□□□□□ -0.39
ZNF558-207ENST00000601372 A0A0G2JLW4 131 aa12.6□□□□□ -0.39
ZNF558-207ENST00000601372 NEMFO60524 1076 aa12.6□□□□□ -0.39
ZNF558-207ENST00000601372 ZBTB21Q9ULJ3 1066 aa12.6□□□□□ -0.39
ZNF558-207ENST00000601372 KIF5CO60282 957 aa12.59□□□□□ -0.39
ZNF558-207ENST00000601372 ZBED4O75132 1171 aa12.59□□□□□ -0.39
ZNF558-207ENST00000601372 CHRNA5P30532 468 aa12.59□□□□□ -0.39
ZNF558-207ENST00000601372 CCDC174Q6PII3 467 aa12.59□□□□□ -0.39
ZNF558-207ENST00000601372 CPXCR1Q8N123 301 aa12.59□□□□□ -0.39
ZNF558-207ENST00000601372 SPTLC2O15270 562 aa12.59□□□□□ -0.39
ZNF558-207ENST00000601372 BRD1O95696 1058 aa12.59□□□□□ -0.39
ZNF558-207ENST00000601372 MAPK8IP2Q13387 824 aaPredicted RBP12.59□□□□□ -0.39
ZNF558-207ENST00000601372 AOC3Q16853 763 aa12.59□□□□□ -0.39
ZNF558-207ENST00000601372 KCNG4Q8TDN1 519 aa12.59□□□□□ -0.39
ZNF558-207ENST00000601372 KIF4BQ2VIQ3 1234 aa12.59□□□□□ -0.39
ZNF558-207ENST00000601372 LINC00116Q8NCU8 138 aa12.59□□□□□ -0.39
ZNF558-207ENST00000601372 C6orf50Q9HD87 102 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms