RNA–Protein interactions for RNA: ENST00000598772.1

HERC3-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 2

Gene HERC3, Length 326 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-213ENST00000598772 XIRP2A4UGR9 3374 aa5.82□□□□□ -1.48
HERC3-213ENST00000598772 TPRP12270 2363 aaKnown RBP5.81□□□□□ -1.48
HERC3-213ENST00000598772 ANKRD11Q6UB99 2663 aaPredicted RBP5.81□□□□□ -1.48
HERC3-213ENST00000598772 TTLL13PA6NNM8 815 aa5.81□□□□□ -1.48
HERC3-213ENST00000598772 ATP5J2-PTCD1G3V325 749 aa5.81□□□□□ -1.48
HERC3-213ENST00000598772 IRS4O14654 1257 aaPredicted RBP5.81□□□□□ -1.48
HERC3-213ENST00000598772 ERC2O15083 957 aa5.81□□□□□ -1.48
HERC3-213ENST00000598772 ALADP13716 330 aa5.81□□□□□ -1.48
HERC3-213ENST00000598772 CCND3P30281 292 aaPredicted RBP5.81□□□□□ -1.48
HERC3-213ENST00000598772 TNNI2P48788 182 aa5.81□□□□□ -1.48
HERC3-213ENST00000598772 MIGA2Q7L4E1 593 aa5.81□□□□□ -1.48
HERC3-213ENST00000598772 COPS6Q7L5N1 327 aa5.81□□□□□ -1.48
HERC3-213ENST00000598772 ANKRD18AQ8IVF6 992 aa5.81□□□□□ -1.48
HERC3-213ENST00000598772 CNTNAP3BQ96NU0 1288 aa5.81□□□□□ -1.48
HERC3-213ENST00000598772 CNTNAP3Q9BZ76 1288 aa5.81□□□□□ -1.48
HERC3-213ENST00000598772 COA1Q9GZY4 146 aa5.81□□□□□ -1.48
HERC3-213ENST00000598772 NKX2-4Q9H2Z4 354 aa5.81□□□□□ -1.48
HERC3-213ENST00000598772 MSRAQ9UJ68 235 aa5.81□□□□□ -1.48
HERC3-213ENST00000598772 LAMB2P55268 1798 aa5.8□□□□□ -1.48
HERC3-213ENST00000598772 TRIM43BA6NCK2 446 aa5.8□□□□□ -1.48
HERC3-213ENST00000598772 SOWAHBA6NEL2 793 aa5.8□□□□□ -1.48
HERC3-213ENST00000598772 RAG1P15918 1043 aa5.8□□□□□ -1.48
HERC3-213ENST00000598772 KCNJ4P48050 445 aa5.8□□□□□ -1.48
HERC3-213ENST00000598772 PPATQ06203 517 aa5.8□□□□□ -1.48
HERC3-213ENST00000598772 CACNB2Q08289 660 aaPredicted RBP5.8□□□□□ -1.48
HERC3-213ENST00000598772 TAF7Q15545 349 aaPredicted RBP5.8□□□□□ -1.48
HERC3-213ENST00000598772 TRIM60Q495X7 471 aa5.8□□□□□ -1.48
HERC3-213ENST00000598772 TXNRD3Q86VQ6 643 aa5.8□□□□□ -1.48
HERC3-213ENST00000598772 GJD3Q8N144 294 aa5.8□□□□□ -1.48
HERC3-213ENST00000598772 HERVK_113Q902F9 699 aa5.8□□□□□ -1.48
HERC3-213ENST00000598772 TRIB2Q92519 343 aa5.8□□□□□ -1.48
HERC3-213ENST00000598772 JARID2Q92833 1246 aaPredicted RBP5.8□□□□□ -1.48
HERC3-213ENST00000598772 HLA-CQ95604 372 aa5.8□□□□□ -1.48
HERC3-213ENST00000598772 TRIM43Q96BQ3 446 aaPredicted RBP5.8□□□□□ -1.48
HERC3-213ENST00000598772 MFSD14AQ96MC6 490 aa5.8□□□□□ -1.48
HERC3-213ENST00000598772 PBX4Q9BYU1 374 aa5.8□□□□□ -1.48
HERC3-213ENST00000598772 SLC28A3Q9HAS3 691 aa5.8□□□□□ -1.48
HERC3-213ENST00000598772 DOCK3Q8IZD9 2030 aa5.8□□□□□ -1.48
HERC3-213ENST00000598772 REV3LO60673 3130 aa5.8□□□□□ -1.48
HERC3-213ENST00000598772 MGAMO43451 1857 aa5.79□□□□□ -1.48
HERC3-213ENST00000598772 MED19A0JLT2 244 aaPredicted RBP5.79□□□□□ -1.48
HERC3-213ENST00000598772 RFXAPO00287 272 aa5.79□□□□□ -1.48
HERC3-213ENST00000598772 GTPBP6O43824 516 aaPredicted RBP5.79□□□□□ -1.48
HERC3-213ENST00000598772 INPP5BP32019 993 aa5.79□□□□□ -1.48
HERC3-213ENST00000598772 CCT4P50991 539 aaKnown RBP5.79□□□□□ -1.48
HERC3-213ENST00000598772 CACNB3P54284 484 aa5.79□□□□□ -1.48
HERC3-213ENST00000598772 PTPN5P54829 565 aa5.79□□□□□ -1.48
HERC3-213ENST00000598772 FPGSQ05932 587 aa5.79□□□□□ -1.48
HERC3-213ENST00000598772 GJC2Q5T442 439 aaPredicted RBP5.79□□□□□ -1.48
HERC3-213ENST00000598772 GPAT2Q6NUI2 795 aa5.79□□□□□ -1.48
HERC3-213ENST00000598772 SLC39A5Q6ZMH5 540 aa5.79□□□□□ -1.48
HERC3-213ENST00000598772 HFE2Q6ZVN8 426 aa5.79□□□□□ -1.48
HERC3-213ENST00000598772 CERS5Q8N5B7 392 aa5.79□□□□□ -1.48
HERC3-213ENST00000598772 XAGE3Q8WTP9 111 aa5.79□□□□□ -1.48
HERC3-213ENST00000598772 ATOH1Q92858 354 aaPredicted RBP5.79□□□□□ -1.48
HERC3-213ENST00000598772 FERMT2Q96AC1 680 aa5.79□□□□□ -1.48
HERC3-213ENST00000598772 PHACTR3Q96KR7 559 aa5.79□□□□□ -1.48
HERC3-213ENST00000598772 TEPSINQ96N21 525 aa5.79□□□□□ -1.48
HERC3-213ENST00000598772 COG5Q9UP83 839 aa5.79□□□□□ -1.48
HERC3-213ENST00000598772 ANKRD36CQ5JPF3 1778 aa5.79□□□□□ -1.48
HERC3-213ENST00000598772 TRANK1O15050 2925 aa5.78□□□□□ -1.48
HERC3-213ENST00000598772 ZKSCAN1P17029 563 aaPredicted RBP5.78□□□□□ -1.48
HERC3-213ENST00000598772 EIF4G2P78344 907 aaKnown RBP eCLIP5.78□□□□□ -1.48
HERC3-213ENST00000598772 TLE2Q04725 743 aa5.78□□□□□ -1.48
HERC3-213ENST00000598772 PROSER3Q2NL68 480 aa5.78□□□□□ -1.48
HERC3-213ENST00000598772 CCDC152Q4G0S7 254 aa5.78□□□□□ -1.48
HERC3-213ENST00000598772 RIF1Q5UIP0 2472 aaKnown RBP5.78□□□□□ -1.48
HERC3-213ENST00000598772 KRT40Q6A162 431 aa5.78□□□□□ -1.48
HERC3-213ENST00000598772 FASTKD5Q7L8L6 764 aaKnown RBP5.78□□□□□ -1.48
HERC3-213ENST00000598772 CCAR1Q8IX12 1150 aaKnown RBP5.78□□□□□ -1.48
HERC3-213ENST00000598772 PRSS33Q8NF86 280 aa5.78□□□□□ -1.48
HERC3-213ENST00000598772 PANK3Q9H999 370 aa5.78□□□□□ -1.48
HERC3-213ENST00000598772 CERS4Q9HA82 394 aa5.78□□□□□ -1.48
HERC3-213ENST00000598772 CWC22Q9HCG8 908 aaKnown RBP5.78□□□□□ -1.48
HERC3-213ENST00000598772 PDLIM7Q9NR12 457 aa5.78□□□□□ -1.48
HERC3-213ENST00000598772 CHD6Q8TD26 2715 aa5.78□□□□□ -1.48
HERC3-213ENST00000598772 OTOFQ9HC10 1997 aa5.78□□□□□ -1.48
HERC3-213ENST00000598772 CEMIPQ8WUJ3 1361 aa5.78□□□□□ -1.48
HERC3-213ENST00000598772 LRRC37AA6NMS7 1700 aa5.77□□□□□ -1.49
HERC3-213ENST00000598772 APBB1O00213 710 aa5.77□□□□□ -1.49
HERC3-213ENST00000598772 DCXO43602 365 aa5.77□□□□□ -1.49
HERC3-213ENST00000598772 RGS20O76081 388 aa5.77□□□□□ -1.49
HERC3-213ENST00000598772 KLRK1P26718 216 aa5.77□□□□□ -1.49
HERC3-213ENST00000598772 PRKAR2BP31323 418 aa5.77□□□□□ -1.49
HERC3-213ENST00000598772 MOGSQ13724 837 aa5.77□□□□□ -1.49
HERC3-213ENST00000598772 ANO1Q5XXA6 986 aa5.77□□□□□ -1.49
HERC3-213ENST00000598772 DCAF15Q66K64 600 aa5.77□□□□□ -1.49
HERC3-213ENST00000598772 KIF12Q96FN5 646 aa5.77□□□□□ -1.49
HERC3-213ENST00000598772 ZNF341Q9BYN7 854 aa5.77□□□□□ -1.49
HERC3-213ENST00000598772 TMEM39AQ9NV64 488 aa5.77□□□□□ -1.49
HERC3-213ENST00000598772 GJD2Q9UKL4 321 aa5.77□□□□□ -1.49
HERC3-213ENST00000598772 MINPP1Q9UNW1 487 aa5.77□□□□□ -1.49
HERC3-213ENST00000598772 TACC3Q9Y6A5 838 aa5.77□□□□□ -1.49
HERC3-213ENST00000598772 ZHX2Q9Y6X8 837 aa5.77□□□□□ -1.49
HERC3-213ENST00000598772 COL4A1P02462 1669 aa5.77□□□□□ -1.49
HERC3-213ENST00000598772 CHD9Q3L8U1 2897 aa5.77□□□□□ -1.49
HERC3-213ENST00000598772 LAMB1P07942 1786 aa5.77□□□□□ -1.49
HERC3-213ENST00000598772 MED23Q9ULK4 1368 aa5.77□□□□□ -1.49
HERC3-213ENST00000598772 PLXNA1Q9UIW2 1896 aa5.77□□□□□ -1.49
HERC3-213ENST00000598772 WDR87Q6ZQQ6 2873 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms