RNA–Protein interactions for RNA: ENST00000598607.1

GTF2F1-206, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 4

Gene GTF2F1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-206ENST00000598607 TGFBRAP1Q8WUH2 860 aa18.17■□□□□ 0.5
GTF2F1-206ENST00000598607 TEPSINQ96N21 525 aa18.17■□□□□ 0.5
GTF2F1-206ENST00000598607 GBA2Q9HCG7 927 aaPredicted RBP18.17■□□□□ 0.5
GTF2F1-206ENST00000598607 DDX4Q9NQI0 724 aaKnown RBP18.17■□□□□ 0.5
GTF2F1-206ENST00000598607 CREBZFQ9NS37 354 aa18.17■□□□□ 0.5
GTF2F1-206ENST00000598607 LAMB1P07942 1786 aa18.17■□□□□ 0.5
GTF2F1-206ENST00000598607 PPP1R12BO60237 982 aaPredicted RBP18.16■□□□□ 0.5
GTF2F1-206ENST00000598607 SLFNL1Q499Z3 407 aa18.16■□□□□ 0.5
GTF2F1-206ENST00000598607 ZMYM1Q5SVZ6 1142 aa18.16■□□□□ 0.5
GTF2F1-206ENST00000598607 NBPF12Q5TAG4 269 aaPredicted RBP18.16■□□□□ 0.5
GTF2F1-206ENST00000598607 CST9Q5W186 159 aa18.16■□□□□ 0.5
GTF2F1-206ENST00000598607 ZSCAN29Q8IWY8 852 aaPredicted RBP18.16■□□□□ 0.5
GTF2F1-206ENST00000598607 LCORLQ8N3X6 602 aa18.16■□□□□ 0.5
GTF2F1-206ENST00000598607 PUS7LQ9H0K6 701 aaKnown RBP18.16■□□□□ 0.5
GTF2F1-206ENST00000598607 OSBPL5Q9H0X9 879 aaPredicted RBP18.16■□□□□ 0.5
GTF2F1-206ENST00000598607 ARMT1Q9H993 441 aa18.16■□□□□ 0.5
GTF2F1-206ENST00000598607 FLT1P17948 1338 aa18.16■□□□□ 0.5
GTF2F1-206ENST00000598607 SIPA1L1O43166 1804 aa18.16■□□□□ 0.5
GTF2F1-206ENST00000598607 ATRNL1Q5VV63 1379 aa18.16■□□□□ 0.5
GTF2F1-206ENST00000598607 ATAD5Q96QE3 1844 aa18.15■□□□□ 0.5
GTF2F1-206ENST00000598607 CHGBP05060 677 aa18.15■□□□□ 0.5
GTF2F1-206ENST00000598607 GSPT1P15170 499 aaKnown RBP18.15■□□□□ 0.5
GTF2F1-206ENST00000598607 TTLL12Q14166 644 aaPredicted RBP18.15■□□□□ 0.5
GTF2F1-206ENST00000598607 DCAF15Q66K64 600 aa18.15■□□□□ 0.5
GTF2F1-206ENST00000598607 MAPKAPK5Q8IW41 473 aa18.15■□□□□ 0.5
GTF2F1-206ENST00000598607 OSBP2Q969R2 916 aa18.15■□□□□ 0.5
GTF2F1-206ENST00000598607 DHX36Q9H2U1 1008 aaKnown RBP18.15■□□□□ 0.5
GTF2F1-206ENST00000598607 HELLSQ9NRZ9 838 aa18.15■□□□□ 0.5
GTF2F1-206ENST00000598607 SSC5DA1L4H1 1573 aa18.15■□□□□ 0.5
GTF2F1-206ENST00000598607 GNAT2P19087 354 aa18.14■□□□□ 0.49
GTF2F1-206ENST00000598607 SDSP20132 328 aa18.14■□□□□ 0.49
GTF2F1-206ENST00000598607 ARMC9Q7Z3E5 817 aa18.14■□□□□ 0.49
GTF2F1-206ENST00000598607 DDRGK1Q96HY6 314 aa18.14■□□□□ 0.49
GTF2F1-206ENST00000598607 CSRNP1Q96S65 589 aa18.14■□□□□ 0.49
GTF2F1-206ENST00000598607 DIAPH3Q9NSV4 1193 aa18.14■□□□□ 0.49
GTF2F1-206ENST00000598607 ATP8A2Q9NTI2 1148 aa18.14■□□□□ 0.49
GTF2F1-206ENST00000598607 GPAA1O43292 621 aa18.13■□□□□ 0.49
GTF2F1-206ENST00000598607 ZFPM1Q8IX07 1006 aa18.13■□□□□ 0.49
GTF2F1-206ENST00000598607 ABT1Q9ULW3 272 aaKnown RBP18.13■□□□□ 0.49
GTF2F1-206ENST00000598607 TLL2Q9Y6L7 1015 aa18.13■□□□□ 0.49
GTF2F1-206ENST00000598607 SLC4A4Q9Y6R1 1079 aa18.13■□□□□ 0.49
GTF2F1-206ENST00000598607 DDTLA6NHG4 134 aaPredicted RBP18.12■□□□□ 0.49
GTF2F1-206ENST00000598607 M0R2C6 588 aa18.12■□□□□ 0.49
GTF2F1-206ENST00000598607 HLA-DOAP06340 250 aa18.12■□□□□ 0.49
GTF2F1-206ENST00000598607 IREB2P48200 963 aaKnown RBP18.12■□□□□ 0.49
GTF2F1-206ENST00000598607 BMP2KLQ5H9B9 411 aa18.12■□□□□ 0.49
GTF2F1-206ENST00000598607 CDAN1Q8IWY9 1227 aa18.12■□□□□ 0.49
GTF2F1-206ENST00000598607 STRBPQ96SI9 672 aaKnown RBP18.12■□□□□ 0.49
GTF2F1-206ENST00000598607 DOCK1Q14185 1865 aa18.12■□□□□ 0.49
GTF2F1-206ENST00000598607 UNCXA6NJT0 531 aa18.11■□□□□ 0.49
GTF2F1-206ENST00000598607 MFAP1P55081 439 aaKnown RBP18.11■□□□□ 0.49
GTF2F1-206ENST00000598607 HUNKP57058 714 aa18.11■□□□□ 0.49
GTF2F1-206ENST00000598607 NMIQ13287 307 aaPredicted RBP18.11■□□□□ 0.49
GTF2F1-206ENST00000598607 PRKG1Q13976 671 aa18.11■□□□□ 0.49
GTF2F1-206ENST00000598607 MAP3K11Q16584 847 aa18.11■□□□□ 0.49
GTF2F1-206ENST00000598607 MCMDC2Q4G0Z9 681 aa18.11■□□□□ 0.49
GTF2F1-206ENST00000598607 SH3BP5LQ7L8J4 393 aa18.11■□□□□ 0.49
GTF2F1-206ENST00000598607 SAPCD2Q86UD0 394 aa18.11■□□□□ 0.49
GTF2F1-206ENST00000598607 AMOTL1Q8IY63 956 aa18.11■□□□□ 0.49
GTF2F1-206ENST00000598607 SDR42E1Q8WUS8 393 aa18.11■□□□□ 0.49
GTF2F1-206ENST00000598607 HHIPL1Q96JK4 782 aa18.11■□□□□ 0.49
GTF2F1-206ENST00000598607 SEC62Q99442 399 aaKnown RBP18.11■□□□□ 0.49
GTF2F1-206ENST00000598607 ZNF341Q9BYN7 854 aa18.11■□□□□ 0.49
GTF2F1-206ENST00000598607 DCP1AQ9NPI6 582 aaPredicted RBP18.11■□□□□ 0.49
GTF2F1-206ENST00000598607 PI4KBQ9UBF8 816 aa18.11■□□□□ 0.49
GTF2F1-206ENST00000598607 ANGEL1Q9UNK9 670 aaKnown RBP18.11■□□□□ 0.49
GTF2F1-206ENST00000598607 GIMAP6Q6P9H5 292 aa18.1■□□□□ 0.49
GTF2F1-206ENST00000598607 TTC6Q86TZ1 520 aa18.1■□□□□ 0.49
GTF2F1-206ENST00000598607 SKAP1Q86WV1 359 aa18.1■□□□□ 0.49
GTF2F1-206ENST00000598607 MKRN1Q9UHC7 482 aaKnown RBP18.1■□□□□ 0.49
GTF2F1-206ENST00000598607 A0A0D9SFI3 127 aa18.09■□□□□ 0.49
GTF2F1-206ENST00000598607 PRKAB2O43741 272 aa18.09■□□□□ 0.49
GTF2F1-206ENST00000598607 TBC1D12O60347 775 aa18.09■□□□□ 0.49
GTF2F1-206ENST00000598607 USP2O75604 605 aaPredicted RBP18.09■□□□□ 0.49
GTF2F1-206ENST00000598607 POLR3DP05423 398 aaPredicted RBP18.09■□□□□ 0.49
GTF2F1-206ENST00000598607 FOXP4Q8IVH2 680 aaPredicted RBP18.09■□□□□ 0.49
GTF2F1-206ENST00000598607 RUFY2Q8WXA3 655 aa18.09■□□□□ 0.49
GTF2F1-206ENST00000598607 FAM227BQ96M60 508 aa18.09■□□□□ 0.49
GTF2F1-206ENST00000598607 NACAP1Q9BZK3 213 aa18.09■□□□□ 0.49
GTF2F1-206ENST00000598607 MCM9Q9NXL9 1143 aa18.09■□□□□ 0.49
GTF2F1-206ENST00000598607 SAP30BPQ9UHR5 308 aaKnown RBP18.09■□□□□ 0.49
GTF2F1-206ENST00000598607 HERC5Q9UII4 1024 aaKnown RBP18.09■□□□□ 0.49
GTF2F1-206ENST00000598607 PALD1Q9ULE6 856 aa18.09■□□□□ 0.49
GTF2F1-206ENST00000598607 RASSF10A6NK89 507 aa18.08■□□□□ 0.48
GTF2F1-206ENST00000598607 PATL2C9JE40 543 aaKnown RBP18.08■□□□□ 0.48
GTF2F1-206ENST00000598607 MAP3K10Q02779 954 aa18.08■□□□□ 0.48
GTF2F1-206ENST00000598607 DEFB115Q30KQ5 88 aa18.08■□□□□ 0.48
GTF2F1-206ENST00000598607 CWC27Q6UX04 472 aaKnown RBP18.08■□□□□ 0.48
GTF2F1-206ENST00000598607 MIGA2Q7L4E1 593 aa18.08■□□□□ 0.48
GTF2F1-206ENST00000598607 ANKRD13AQ8IZ07 590 aa18.08■□□□□ 0.48
GTF2F1-206ENST00000598607 KLRG1Q96E93 195 aa18.08■□□□□ 0.48
GTF2F1-206ENST00000598607 TRIM34Q9BYJ4 488 aa18.08■□□□□ 0.48
GTF2F1-206ENST00000598607 LAMA4Q16363 1823 aa18.07■□□□□ 0.48
GTF2F1-206ENST00000598607 CCDC171Q6TFL3 1326 aa18.07■□□□□ 0.48
GTF2F1-206ENST00000598607 RAD50Q92878 1312 aa18.07■□□□□ 0.48
GTF2F1-206ENST00000598607 GSG1L2A8MUP6 293 aa18.07■□□□□ 0.48
GTF2F1-206ENST00000598607 UBE2Q2LH0YL09 131 aa18.07■□□□□ 0.48
GTF2F1-206ENST00000598607 APPP05067 770 aa18.07■□□□□ 0.48
GTF2F1-206ENST00000598607 LDLRAD1Q5T700 205 aa18.07■□□□□ 0.48
GTF2F1-206ENST00000598607 MOB2Q70IA6 237 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms