RNA–Protein interactions for RNA: ENST00000597848.1

CHMP2A-204, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-204ENST00000597848 CDCA5Q96FF9 252 aa26.56■■□□□ 1.84
CHMP2A-204ENST00000597848 ECM29Q5VYK3 1845 aa26.55■■□□□ 1.84
CHMP2A-204ENST00000597848 POLR2AP24928 1970 aaKnown RBP26.55■■□□□ 1.84
CHMP2A-204ENST00000597848 NPM3O75607 178 aaKnown RBP26.55■■□□□ 1.84
CHMP2A-204ENST00000597848 CHMLP26374 656 aa26.55■■□□□ 1.84
CHMP2A-204ENST00000597848 FMR1Q06787 632 aaKnown RBP eCLIP26.55■■□□□ 1.84
CHMP2A-204ENST00000597848 CCDC129Q6ZRS4 1044 aa26.55■■□□□ 1.84
CHMP2A-204ENST00000597848 SDR42E1Q8WUS8 393 aa26.54■■□□□ 1.84
CHMP2A-204ENST00000597848 ZNF408Q9H9D4 720 aa26.54■■□□□ 1.84
CHMP2A-204ENST00000597848 AK9Q5TCS8 1911 aa26.53■■□□□ 1.84
CHMP2A-204ENST00000597848 GNAT2P19087 354 aa26.53■■□□□ 1.84
CHMP2A-204ENST00000597848 RUFY2Q8WXA3 655 aa26.53■■□□□ 1.84
CHMP2A-204ENST00000597848 DDRGK1Q96HY6 314 aa26.53■■□□□ 1.84
CHMP2A-204ENST00000597848 OSBPL5Q9H0X9 879 aaPredicted RBP26.53■■□□□ 1.84
CHMP2A-204ENST00000597848 SAP30BPQ9UHR5 308 aaKnown RBP26.53■■□□□ 1.84
CHMP2A-204ENST00000597848 FLT1P17948 1338 aa26.53■■□□□ 1.84
CHMP2A-204ENST00000597848 APPP05067 770 aa26.52■■□□□ 1.84
CHMP2A-204ENST00000597848 NF2P35240 595 aa26.52■■□□□ 1.84
CHMP2A-204ENST00000597848 SUPT20HL1Q3ZLR7 823 aa26.52■■□□□ 1.84
CHMP2A-204ENST00000597848 NBPF12Q5TAG4 269 aaPredicted RBP26.52■■□□□ 1.84
CHMP2A-204ENST00000597848 MFAP1P55081 439 aaKnown RBP26.51■■□□□ 1.83
CHMP2A-204ENST00000597848 CDAN1Q8IWY9 1227 aa26.51■■□□□ 1.83
CHMP2A-204ENST00000597848 TEPSINQ96N21 525 aa26.51■■□□□ 1.83
CHMP2A-204ENST00000597848 ATP8A2Q9NTI2 1148 aa26.51■■□□□ 1.83
CHMP2A-204ENST00000597848 CDC45O75419 566 aa26.5■■□□□ 1.83
CHMP2A-204ENST00000597848 CELF2O95319 508 aaKnown RBP26.5■■□□□ 1.83
CHMP2A-204ENST00000597848 CASC1Q6TDU7 716 aa26.5■■□□□ 1.83
CHMP2A-204ENST00000597848 DCP1AQ9NPI6 582 aaPredicted RBP26.5■■□□□ 1.83
CHMP2A-204ENST00000597848 CCDC171Q6TFL3 1326 aa26.49■■□□□ 1.83
CHMP2A-204ENST00000597848 PASKQ96RG2 1323 aa26.49■■□□□ 1.83
CHMP2A-204ENST00000597848 DDTLA6NHG4 134 aaPredicted RBP26.49■■□□□ 1.83
CHMP2A-204ENST00000597848 PATL2C9JE40 543 aaKnown RBP26.49■■□□□ 1.83
CHMP2A-204ENST00000597848 SH3BP5LQ7L8J4 393 aa26.49■■□□□ 1.83
CHMP2A-204ENST00000597848 ZNF589Q86UQ0 364 aaPredicted RBP26.49■■□□□ 1.83
CHMP2A-204ENST00000597848 CSRNP1Q96S65 589 aa26.49■■□□□ 1.83
CHMP2A-204ENST00000597848 MCM9Q9NXL9 1143 aa26.49■■□□□ 1.83
CHMP2A-204ENST00000597848 PALD1Q9ULE6 856 aa26.49■■□□□ 1.83
CHMP2A-204ENST00000597848 GSG1L2A8MUP6 293 aa26.48■■□□□ 1.83
CHMP2A-204ENST00000597848 POLR3DP05423 398 aaPredicted RBP26.48■■□□□ 1.83
CHMP2A-204ENST00000597848 SLC4A8Q2Y0W8 1093 aa26.48■■□□□ 1.83
CHMP2A-204ENST00000597848 HOOK2Q96ED9 719 aa26.48■■□□□ 1.83
CHMP2A-204ENST00000597848 NACAP1Q9BZK3 213 aa26.48■■□□□ 1.83
CHMP2A-204ENST00000597848 DHX36Q9H2U1 1008 aaKnown RBP26.48■■□□□ 1.83
CHMP2A-204ENST00000597848 PRKG1Q13976 671 aa26.47■■□□□ 1.83
CHMP2A-204ENST00000597848 TTLL12Q14166 644 aaPredicted RBP26.47■■□□□ 1.83
CHMP2A-204ENST00000597848 MKRN1Q9UHC7 482 aaKnown RBP26.47■■□□□ 1.83
CHMP2A-204ENST00000597848 RPAP1Q9BWH6 1393 aaPredicted RBP26.46■■□□□ 1.83
CHMP2A-204ENST00000597848 RAD50Q92878 1312 aa26.46■■□□□ 1.83
CHMP2A-204ENST00000597848 HLA-DOAP06340 250 aa26.46■■□□□ 1.83
CHMP2A-204ENST00000597848 TDO2P48775 406 aa26.46■■□□□ 1.83
CHMP2A-204ENST00000597848 VPS53Q5VIR6 699 aa26.46■■□□□ 1.83
CHMP2A-204ENST00000597848 AMOTL1Q8IY63 956 aa26.46■■□□□ 1.83
CHMP2A-204ENST00000597848 CST9Q5W186 159 aa26.45■■□□□ 1.82
CHMP2A-204ENST00000597848 GIMAP6Q6P9H5 292 aa26.45■■□□□ 1.82
CHMP2A-204ENST00000597848 MIGA2Q7L4E1 593 aa26.45■■□□□ 1.82
CHMP2A-204ENST00000597848 TTC6Q86TZ1 520 aa26.45■■□□□ 1.82
CHMP2A-204ENST00000597848 IFNL3Q8IZI9 196 aa26.45■■□□□ 1.82
CHMP2A-204ENST00000597848 PI4KBQ9UBF8 816 aa26.45■■□□□ 1.82
CHMP2A-204ENST00000597848 ATRNL1Q5VV63 1379 aa26.45■■□□□ 1.82
CHMP2A-204ENST00000597848 USP17L12C9JPN9 530 aa26.44■■□□□ 1.82
CHMP2A-204ENST00000597848 USP17L21D6R901 530 aa26.44■■□□□ 1.82
CHMP2A-204ENST00000597848 PPP1R12BO60237 982 aaPredicted RBP26.44■■□□□ 1.82
CHMP2A-204ENST00000597848 C2orf69Q8N8R5 385 aa26.44■■□□□ 1.82
CHMP2A-204ENST00000597848 IL25Q9H293 177 aa26.44■■□□□ 1.82
CHMP2A-204ENST00000597848 GBA2Q9HCG7 927 aaPredicted RBP26.44■■□□□ 1.82
CHMP2A-204ENST00000597848 SGSM2O43147 1006 aa26.43■■□□□ 1.82
CHMP2A-204ENST00000597848 HSPD1P10809 573 aaKnown RBP26.43■■□□□ 1.82
CHMP2A-204ENST00000597848 DCAF15Q66K64 600 aa26.43■■□□□ 1.82
CHMP2A-204ENST00000597848 ESYT1Q9BSJ8 1104 aa26.43■■□□□ 1.82
CHMP2A-204ENST00000597848 TRIM34Q9BYJ4 488 aa26.43■■□□□ 1.82
CHMP2A-204ENST00000597848 NAPBQ9H115 298 aa26.43■■□□□ 1.82
CHMP2A-204ENST00000597848 EPB41L4AQ9HCS5 686 aaPredicted RBP26.43■■□□□ 1.82
CHMP2A-204ENST00000597848 COL2A1P02458 1487 aaPredicted RBP26.42■■□□□ 1.82
CHMP2A-204ENST00000597848 CYP2D6P10635 497 aa26.42■■□□□ 1.82
CHMP2A-204ENST00000597848 C1QTNF8P60827 252 aa26.42■■□□□ 1.82
CHMP2A-204ENST00000597848 CTR9Q6PD62 1173 aa26.42■■□□□ 1.82
CHMP2A-204ENST00000597848 ARMC9Q7Z3E5 817 aa26.42■■□□□ 1.82
CHMP2A-204ENST00000597848 CRACR2BQ8N4Y2 399 aaPredicted RBP26.42■■□□□ 1.82
CHMP2A-204ENST00000597848 FZD1Q9UP38 647 aa26.42■■□□□ 1.82
CHMP2A-204ENST00000597848 CDK5RAP2Q96SN8 1893 aa26.41■■□□□ 1.82
CHMP2A-204ENST00000597848 CYP2D7A0A087X1C5 515 aa26.41■■□□□ 1.82
CHMP2A-204ENST00000597848 TMEM88BA6NKF7 163 aa26.41■■□□□ 1.82
CHMP2A-204ENST00000597848 MINDY4BA8MYZ0 360 aa26.41■■□□□ 1.82
CHMP2A-204ENST00000597848 APLP1P51693 650 aa26.41■■□□□ 1.82
CHMP2A-204ENST00000597848 KIAA1211Q6ZU35 1233 aa26.41■■□□□ 1.82
CHMP2A-204ENST00000597848 FOXP4Q8IVH2 680 aaPredicted RBP26.41■■□□□ 1.82
CHMP2A-204ENST00000597848 ARPP21Q9UBL0 812 aaPredicted RBP26.41■■□□□ 1.82
CHMP2A-204ENST00000597848 ANGEL1Q9UNK9 670 aaKnown RBP26.41■■□□□ 1.82
CHMP2A-204ENST00000597848 FOXP2O15409 715 aa26.4■■□□□ 1.82
CHMP2A-204ENST00000597848 PLCD1P51178 756 aa26.4■■□□□ 1.82
CHMP2A-204ENST00000597848 MOB2Q70IA6 237 aa26.4■■□□□ 1.82
CHMP2A-204ENST00000597848 ZNF341Q9BYN7 854 aa26.4■■□□□ 1.82
CHMP2A-204ENST00000597848 XPO5Q9HAV4 1204 aaKnown RBP eCLIP26.4■■□□□ 1.82
CHMP2A-204ENST00000597848 SSC5DA1L4H1 1573 aa26.4■■□□□ 1.82
CHMP2A-204ENST00000597848 USP2O75604 605 aaPredicted RBP26.39■■□□□ 1.82
CHMP2A-204ENST00000597848 SLURP2P0DP57 97 aa26.39■■□□□ 1.82
CHMP2A-204ENST00000597848 IREB2P48200 963 aaKnown RBP26.39■■□□□ 1.82
CHMP2A-204ENST00000597848 FKBP1BP68106 108 aa26.39■■□□□ 1.82
CHMP2A-204ENST00000597848 ALX1Q15699 326 aa26.39■■□□□ 1.82
CHMP2A-204ENST00000597848 SBK1Q52WX2 424 aa26.39■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms