RNA–Protein interactions for RNA: ENST00000594828.7

LSM4-204, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-204ENST00000594828 RHBDL3P58872 404 aa28.81■■■□□ 2.2
LSM4-204ENST00000594828 TAF1CQ15572 869 aaPredicted RBP28.81■■■□□ 2.2
LSM4-204ENST00000594828 FAM43AQ8N2R8 423 aa28.81■■■□□ 2.2
LSM4-204ENST00000594828 ERO1AQ96HE7 468 aa28.81■■■□□ 2.2
LSM4-204ENST00000594828 ZFYVE28Q9HCC9 887 aa28.81■■■□□ 2.2
LSM4-204ENST00000594828 DDX4Q9NQI0 724 aaKnown RBP28.81■■■□□ 2.2
LSM4-204ENST00000594828 SP3Q02447 781 aa28.8■■■□□ 2.2
LSM4-204ENST00000594828 MLLT1Q03111 559 aaPredicted RBP28.8■■■□□ 2.2
LSM4-204ENST00000594828 SH3BP5LQ7L8J4 393 aa28.8■■■□□ 2.2
LSM4-204ENST00000594828 ZNF512BQ96KM6 892 aaPredicted RBP28.8■■■□□ 2.2
LSM4-204ENST00000594828 TRIM17Q9Y577 477 aa28.8■■■□□ 2.2
LSM4-204ENST00000594828 DDTLA6NHG4 134 aaPredicted RBP28.79■■■□□ 2.2
LSM4-204ENST00000594828 MAP4K4O95819 1239 aaPredicted RBP28.79■■■□□ 2.2
LSM4-204ENST00000594828 NOL9Q5SY16 702 aaKnown RBP28.79■■■□□ 2.2
LSM4-204ENST00000594828 CCDC8Q9H0W5 538 aaPredicted RBP28.79■■■□□ 2.2
LSM4-204ENST00000594828 RCAN3Q9UKA8 241 aa28.79■■■□□ 2.2
LSM4-204ENST00000594828 ATRNL1Q5VV63 1379 aa28.78■■■□□ 2.2
LSM4-204ENST00000594828 GOLGA6L2Q8N9W4 650 aaPredicted RBP28.78■■■□□ 2.2
LSM4-204ENST00000594828 CD99L2Q8TCZ2 262 aa28.78■■■□□ 2.2
LSM4-204ENST00000594828 EAF2Q96CJ1 260 aaPredicted RBP28.78■■■□□ 2.2
LSM4-204ENST00000594828 DBNLQ9UJU6 430 aaKnown RBP28.78■■■□□ 2.2
LSM4-204ENST00000594828 PHF20L1A8MW92 1017 aa28.77■■■□□ 2.2
LSM4-204ENST00000594828 BTBD19C9JJ37 291 aa28.77■■■□□ 2.2
LSM4-204ENST00000594828 NPM3O75607 178 aaKnown RBP28.77■■■□□ 2.2
LSM4-204ENST00000594828 MAP3K10Q02779 954 aa28.77■■■□□ 2.2
LSM4-204ENST00000594828 OTOP1Q7RTM1 612 aa28.77■■■□□ 2.2
LSM4-204ENST00000594828 ERC1Q8IUD2 1116 aa28.77■■■□□ 2.2
LSM4-204ENST00000594828 ZCCHC17Q9NP64 241 aaKnown RBP28.77■■■□□ 2.2
LSM4-204ENST00000594828 EXOC6BQ9Y2D4 811 aa28.77■■■□□ 2.2
LSM4-204ENST00000594828 COG6Q9Y2V7 657 aa28.77■■■□□ 2.2
LSM4-204ENST00000594828 CYP2E1P05181 493 aaPredicted RBP28.76■■■□□ 2.19
LSM4-204ENST00000594828 SOX10P56693 466 aa28.76■■■□□ 2.19
LSM4-204ENST00000594828 NAA16Q6N069 864 aaPredicted RBP28.76■■■□□ 2.19
LSM4-204ENST00000594828 NOL10Q9BSC4 688 aaKnown RBP28.76■■■□□ 2.19
LSM4-204ENST00000594828 TLR7Q9NYK1 1049 aaKnown RBP28.76■■■□□ 2.19
LSM4-204ENST00000594828 DDX19BQ9UMR2 479 aa28.76■■■□□ 2.19
LSM4-204ENST00000594828 KCNH4Q9UQ05 1017 aa28.75■■■□□ 2.19
LSM4-204ENST00000594828 ZAP70P43403 619 aa28.74■■■□□ 2.19
LSM4-204ENST00000594828 HSP90AB4PQ58FF6 505 aa28.74■■■□□ 2.19
LSM4-204ENST00000594828 PICK1Q9NRD5 415 aa28.74■■■□□ 2.19
LSM4-204ENST00000594828 DOCK2Q92608 1830 aa28.73■■■□□ 2.19
LSM4-204ENST00000594828 BAG3O95817 575 aa28.73■■■□□ 2.19
LSM4-204ENST00000594828 RPAP2Q8IXW5 612 aaPredicted RBP28.73■■■□□ 2.19
LSM4-204ENST00000594828 SCYL3Q8IZE3 742 aa28.73■■■□□ 2.19
LSM4-204ENST00000594828 EFCC1Q9HA90 598 aa28.73■■■□□ 2.19
LSM4-204ENST00000594828 TLR2O60603 784 aa28.72■■■□□ 2.19
LSM4-204ENST00000594828 IGSF3O75054 1194 aa28.72■■■□□ 2.19
LSM4-204ENST00000594828 SLURP2P0DP57 97 aa28.72■■■□□ 2.19
LSM4-204ENST00000594828 TEX11Q8IYF3 940 aa28.72■■■□□ 2.19
LSM4-204ENST00000594828 CHMP4BQ9H444 224 aaKnown RBP28.72■■■□□ 2.19
LSM4-204ENST00000594828 ZBTB40Q9NUA8 1239 aa28.72■■■□□ 2.19
LSM4-204ENST00000594828 CXCL11O14625 94 aa28.71■■■□□ 2.19
LSM4-204ENST00000594828 TBC1D12O60347 775 aa28.71■■■□□ 2.19
LSM4-204ENST00000594828 CTNND1O60716 968 aaKnown RBP28.71■■■□□ 2.19
LSM4-204ENST00000594828 ANKRD23Q86SG2 305 aa28.71■■■□□ 2.19
LSM4-204ENST00000594828 AACSQ86V21 672 aa28.71■■■□□ 2.19
LSM4-204ENST00000594828 SH3RF3Q8TEJ3 882 aaPredicted RBP28.71■■■□□ 2.19
LSM4-204ENST00000594828 OSBPL5Q9H0X9 879 aaPredicted RBP28.71■■■□□ 2.19
LSM4-204ENST00000594828 AATFQ9NY61 560 aaKnown RBP eCLIP28.71■■■□□ 2.19
LSM4-204ENST00000594828 ZHX2Q9Y6X8 837 aa28.71■■■□□ 2.19
LSM4-204ENST00000594828 PTPRAP18433 802 aa28.7■■■□□ 2.18
LSM4-204ENST00000594828 ARHGEF6Q15052 776 aa28.7■■■□□ 2.18
LSM4-204ENST00000594828 PIH1D3Q9NQM4 214 aaKnown RBP28.7■■■□□ 2.18
LSM4-204ENST00000594828 PTPN22Q9Y2R2 807 aa28.7■■■□□ 2.18
LSM4-204ENST00000594828 HMMRO75330 724 aa28.69■■■□□ 2.18
LSM4-204ENST00000594828 PLCG2P16885 1265 aa28.69■■■□□ 2.18
LSM4-204ENST00000594828 PPP4CP60510 307 aa28.69■■■□□ 2.18
LSM4-204ENST00000594828 RHPN1Q8TCX5 695 aa28.69■■■□□ 2.18
LSM4-204ENST00000594828 XPO5Q9HAV4 1204 aaKnown RBP eCLIP28.69■■■□□ 2.18
LSM4-204ENST00000594828 PDHXO00330 501 aa28.68■■■□□ 2.18
LSM4-204ENST00000594828 CAP1Q01518 475 aa28.68■■■□□ 2.18
LSM4-204ENST00000594828 IL1RAPL2Q9NP60 686 aa28.68■■■□□ 2.18
LSM4-204ENST00000594828 MOGSQ13724 837 aa28.67■■■□□ 2.18
LSM4-204ENST00000594828 ADGRA1Q86SQ6 560 aa28.67■■■□□ 2.18
LSM4-204ENST00000594828 COL2A1P02458 1487 aaPredicted RBP28.66■■■□□ 2.18
LSM4-204ENST00000594828 FAM196BA6NMK8 535 aa28.66■■■□□ 2.18
LSM4-204ENST00000594828 SIRT2Q8IXJ6 389 aa28.66■■■□□ 2.18
LSM4-204ENST00000594828 AFG3L2Q9Y4W6 797 aa28.66■■■□□ 2.18
LSM4-204ENST00000594828 APBB1O00213 710 aa28.65■■■□□ 2.18
LSM4-204ENST00000594828 IDH1O75874 414 aaKnown RBP28.65■■■□□ 2.18
LSM4-204ENST00000594828 TGFBRAP1Q8WUH2 860 aa28.65■■■□□ 2.18
LSM4-204ENST00000594828 KIF1BPQ96EK5 621 aa28.65■■■□□ 2.18
LSM4-204ENST00000594828 A0A0G2JLL6 359 aaPredicted RBP28.64■■■□□ 2.18
LSM4-204ENST00000594828 CYP7A1P22680 504 aa28.64■■■□□ 2.18
LSM4-204ENST00000594828 PDE3AQ14432 1141 aa28.64■■■□□ 2.18
LSM4-204ENST00000594828 KIF22Q14807 665 aa28.64■■■□□ 2.18
LSM4-204ENST00000594828 FASTKD5Q7L8L6 764 aaKnown RBP28.64■■■□□ 2.18
LSM4-204ENST00000594828 PRRT2Q7Z6L0 340 aaPredicted RBP28.64■■■□□ 2.18
LSM4-204ENST00000594828 CLASRPQ8N2M8 674 aaKnown RBP28.64■■■□□ 2.18
LSM4-204ENST00000594828 DHX36Q9H2U1 1008 aaKnown RBP28.64■■■□□ 2.18
LSM4-204ENST00000594828 NDUFB9Q9Y6M9 179 aa28.64■■■□□ 2.18
LSM4-204ENST00000594828 MAST2Q6P0Q8 1798 aa28.64■■■□□ 2.18
LSM4-204ENST00000594828 GPAT2Q6NUI2 795 aa28.63■■■□□ 2.17
LSM4-204ENST00000594828 C17orf99Q6UX52 265 aa28.63■■■□□ 2.17
LSM4-204ENST00000594828 PI4KBQ9UBF8 816 aa28.63■■■□□ 2.17
LSM4-204ENST00000594828 CPA4Q9UI42 421 aa28.63■■■□□ 2.17
LSM4-204ENST00000594828 LACTBP83111 547 aaPredicted RBP28.62■■■□□ 2.17
LSM4-204ENST00000594828 C20orf194Q5TEA3 1177 aa28.62■■■□□ 2.17
LSM4-204ENST00000594828 MAPKAPK5Q8IW41 473 aa28.62■■■□□ 2.17
LSM4-204ENST00000594828 ANTXR1Q9H6X2 564 aa28.62■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms