RNA–Protein interactions for RNA: ENST00000594661.5

PNKP-204, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 2,111 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-204ENST00000594661 IRS2Q9Y4H2 1338 aa17.83■□□□□ 0.45
PNKP-204ENST00000594661 TNNT3P45378 269 aaPredicted RBP17.83■□□□□ 0.45
PNKP-204ENST00000594661 CRY2Q49AN0 593 aa17.83■□□□□ 0.45
PNKP-204ENST00000594661 AXDND1Q5T1B0 1012 aaPredicted RBP17.83■□□□□ 0.45
PNKP-204ENST00000594661 TXNRD3Q86VQ6 643 aa17.83■□□□□ 0.45
PNKP-204ENST00000594661 TBC1D10CQ8IV04 446 aa17.83■□□□□ 0.45
PNKP-204ENST00000594661 MB21D2Q8IYB1 491 aaPredicted RBP17.83■□□□□ 0.45
PNKP-204ENST00000594661 MIGA1Q8NAN2 632 aa17.83■□□□□ 0.45
PNKP-204ENST00000594661 TNNT1P13805 278 aa17.83■□□□□ 0.44
PNKP-204ENST00000594661 TPRNQ4KMQ1 711 aa17.83■□□□□ 0.44
PNKP-204ENST00000594661 CDC37L1Q7L3B6 337 aa17.83■□□□□ 0.44
PNKP-204ENST00000594661 RPGRQ92834 1020 aaKnown RBP17.83■□□□□ 0.44
PNKP-204ENST00000594661 AKT1S1Q96B36 256 aa17.83■□□□□ 0.44
PNKP-204ENST00000594661 TRERF1Q96PN7 1200 aa17.83■□□□□ 0.44
PNKP-204ENST00000594661 RAI14Q9P0K7 980 aa17.83■□□□□ 0.44
PNKP-204ENST00000594661 CACNA1SQ13698 1873 aa17.83■□□□□ 0.44
PNKP-204ENST00000594661 MYH13Q9UKX3 1938 aa17.82■□□□□ 0.44
PNKP-204ENST00000594661 PATL2C9JE40 543 aaKnown RBP17.82■□□□□ 0.44
PNKP-204ENST00000594661 PRKAB2O43741 272 aa17.82■□□□□ 0.44
PNKP-204ENST00000594661 HIBADHP31937 336 aaKnown RBP17.82■□□□□ 0.44
PNKP-204ENST00000594661 SCRN1Q12765 414 aa17.82■□□□□ 0.44
PNKP-204ENST00000594661 ZBTB9Q96C00 473 aa17.82■□□□□ 0.44
PNKP-204ENST00000594661 GPHNQ9NQX3 736 aaPredicted RBP17.82■□□□□ 0.44
PNKP-204ENST00000594661 CYP7A1P22680 504 aa17.81■□□□□ 0.44
PNKP-204ENST00000594661 ANTXR2P58335 489 aa17.81■□□□□ 0.44
PNKP-204ENST00000594661 UBE2HP62256 183 aa17.81■□□□□ 0.44
PNKP-204ENST00000594661 ALX1Q15699 326 aa17.81■□□□□ 0.44
PNKP-204ENST00000594661 IFNL3Q8IZI9 196 aa17.81■□□□□ 0.44
PNKP-204ENST00000594661 NCOA7Q8NI08 942 aa17.81■□□□□ 0.44
PNKP-204ENST00000594661 NKX2-3Q8TAU0 364 aa17.81■□□□□ 0.44
PNKP-204ENST00000594661 PNPLA7Q6ZV29 1317 aa17.81■□□□□ 0.44
PNKP-204ENST00000594661 GSG1L2A8MUP6 293 aa17.81■□□□□ 0.44
PNKP-204ENST00000594661 SEMA3EO15041 775 aa17.81■□□□□ 0.44
PNKP-204ENST00000594661 DHX16O60231 1041 aaKnown RBP17.81■□□□□ 0.44
PNKP-204ENST00000594661 JAK2O60674 1132 aa17.81■□□□□ 0.44
PNKP-204ENST00000594661 PFKFB2O60825 505 aa17.81■□□□□ 0.44
PNKP-204ENST00000594661 FERMT3Q86UX7 667 aa17.81■□□□□ 0.44
PNKP-204ENST00000594661 C16orf45Q96MC5 204 aaPredicted RBP17.81■□□□□ 0.44
PNKP-204ENST00000594661 ANKIB1Q9P2G1 1089 aa17.81■□□□□ 0.44
PNKP-204ENST00000594661 ZMYM6O95789 1325 aa17.81■□□□□ 0.44
PNKP-204ENST00000594661 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.8■□□□□ 0.44
PNKP-204ENST00000594661 PRC1O43663 620 aa17.8■□□□□ 0.44
PNKP-204ENST00000594661 FBXO38Q6PIJ6 1188 aa17.8■□□□□ 0.44
PNKP-204ENST00000594661 RALYLQ86SE5 291 aaKnown RBP17.8■□□□□ 0.44
PNKP-204ENST00000594661 COL23A1Q86Y22 540 aaPredicted RBP17.8■□□□□ 0.44
PNKP-204ENST00000594661 ZNF384Q8TF68 577 aa17.8■□□□□ 0.44
PNKP-204ENST00000594661 ST7Q9NRC1 585 aa17.8■□□□□ 0.44
PNKP-204ENST00000594661 TNS1Q9HBL0 1735 aaKnown RBP17.8■□□□□ 0.44
PNKP-204ENST00000594661 FBXL16Q8N461 479 aa17.8■□□□□ 0.44
PNKP-204ENST00000594661 NAPBQ9H115 298 aa17.8■□□□□ 0.44
PNKP-204ENST00000594661 SLC4A4Q9Y6R1 1079 aa17.8■□□□□ 0.44
PNKP-204ENST00000594661 RGS17Q9UGC6 210 aaPredicted RBP17.79■□□□□ 0.44
PNKP-204ENST00000594661 PDS5AQ29RF7 1337 aaKnown RBP17.79■□□□□ 0.44
PNKP-204ENST00000594661 PTGS1P23219 599 aa17.78■□□□□ 0.44
PNKP-204ENST00000594661 BMS1Q14692 1282 aaKnown RBP17.78■□□□□ 0.44
PNKP-204ENST00000594661 GPR101Q96P66 508 aaPredicted RBP17.78■□□□□ 0.44
PNKP-204ENST00000594661 NEDD4P46934 1319 aa17.78■□□□□ 0.44
PNKP-204ENST00000594661 XDHP47989 1333 aa17.78■□□□□ 0.44
PNKP-204ENST00000594661 GNAT2P19087 354 aa17.78■□□□□ 0.44
PNKP-204ENST00000594661 HMGB2P26583 209 aaKnown RBP17.78■□□□□ 0.44
PNKP-204ENST00000594661 PDIA3P30101 505 aaKnown RBP17.78■□□□□ 0.44
PNKP-204ENST00000594661 CCT2P78371 535 aaKnown RBP17.78■□□□□ 0.44
PNKP-204ENST00000594661 ICE2Q659A1 982 aa17.78■□□□□ 0.44
PNKP-204ENST00000594661 SPC24Q8NBT2 197 aa17.78■□□□□ 0.44
PNKP-204ENST00000594661 RBM17Q96I25 401 aaKnown RBP17.78■□□□□ 0.44
PNKP-204ENST00000594661 NCOA5Q9HCD5 579 aaKnown RBP17.78■□□□□ 0.44
PNKP-204ENST00000594661 BRMS1Q9HCU9 246 aa17.78■□□□□ 0.44
PNKP-204ENST00000594661 INCENPQ9NQS7 918 aa17.78■□□□□ 0.44
PNKP-204ENST00000594661 ZNF446Q9NWS9 450 aa17.78■□□□□ 0.44
PNKP-204ENST00000594661 JAG2Q9Y219 1238 aa17.78■□□□□ 0.44
PNKP-204ENST00000594661 LEMD3Q9Y2U8 911 aa17.78■□□□□ 0.44
PNKP-204ENST00000594661 GTF2A1P52655 376 aaPredicted RBP17.77■□□□□ 0.44
PNKP-204ENST00000594661 KRT85P78386 507 aa17.77■□□□□ 0.44
PNKP-204ENST00000594661 GPSM2P81274 684 aa17.77■□□□□ 0.44
PNKP-204ENST00000594661 CTDSPL2Q05D32 466 aa17.77■□□□□ 0.44
PNKP-204ENST00000594661 CYB5R4Q7L1T6 521 aa17.77■□□□□ 0.44
PNKP-204ENST00000594661 TXLNBQ8N3L3 684 aa17.77■□□□□ 0.44
PNKP-204ENST00000594661 FBXO41Q8TF61 875 aa17.77■□□□□ 0.44
PNKP-204ENST00000594661 CHMP4CQ96CF2 233 aa17.77■□□□□ 0.44
PNKP-204ENST00000594661 DDX11Q96FC9 970 aa17.77■□□□□ 0.44
PNKP-204ENST00000594661 ZNF274Q96GC6 653 aaPredicted RBP17.77■□□□□ 0.44
PNKP-204ENST00000594661 ERO1AQ96HE7 468 aa17.77■□□□□ 0.44
PNKP-204ENST00000594661 RIOK1Q9BRS2 568 aaKnown RBP17.77■□□□□ 0.44
PNKP-204ENST00000594661 TACC3Q9Y6A5 838 aa17.77■□□□□ 0.44
PNKP-204ENST00000594661 TIAM2Q8IVF5 1701 aa17.77■□□□□ 0.44
PNKP-204ENST00000594661 ANKRD31Q8N7Z5 1873 aa17.77■□□□□ 0.43
PNKP-204ENST00000594661 MAGEB6P1A0A0J9YX57 407 aa17.77■□□□□ 0.43
PNKP-204ENST00000594661 CTDNEP1O95476 244 aa17.77■□□□□ 0.43
PNKP-204ENST00000594661 EVCP57679 992 aa17.77■□□□□ 0.43
PNKP-204ENST00000594661 TRDNQ13061 729 aa17.77■□□□□ 0.43
PNKP-204ENST00000594661 NAA16Q6N069 864 aaPredicted RBP17.77■□□□□ 0.43
PNKP-204ENST00000594661 FAM173BQ6P4H8 233 aa17.77■□□□□ 0.43
PNKP-204ENST00000594661 SMARCC2Q8TAQ2 1214 aa17.77■□□□□ 0.43
PNKP-204ENST00000594661 KLRG2A4D1S0 409 aaPredicted RBP17.76■□□□□ 0.43
PNKP-204ENST00000594661 B4E1Z4 1266 aa17.76■□□□□ 0.43
PNKP-204ENST00000594661 PRDX5P30044 214 aa17.76■□□□□ 0.43
PNKP-204ENST00000594661 HOXA10P31260 410 aaPredicted RBP17.76■□□□□ 0.43
PNKP-204ENST00000594661 TDO2P48775 406 aa17.76■□□□□ 0.43
PNKP-204ENST00000594661 DYNLL1P63167 89 aaKnown RBP17.76■□□□□ 0.43
PNKP-204ENST00000594661 NSUN7Q8NE18 718 aaKnown RBP17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms