RNA–Protein interactions for RNA: ENST00000594387.1

IRF3-208, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-208ENST00000594387 MAP3K12Q12852 859 aa21.15■□□□□ 0.98
IRF3-208ENST00000594387 TTF1Q15361 905 aaPredicted RBP21.15■□□□□ 0.98
IRF3-208ENST00000594387 IFNL1Q8IU54 200 aa21.15■□□□□ 0.98
IRF3-208ENST00000594387 OTUD5Q96G74 571 aa21.15■□□□□ 0.98
IRF3-208ENST00000594387 CDK5RAP2Q96SN8 1893 aa21.15■□□□□ 0.98
IRF3-208ENST00000594387 NPM3O75607 178 aaKnown RBP21.14■□□□□ 0.97
IRF3-208ENST00000594387 CAPN15O75808 1086 aa21.14■□□□□ 0.97
IRF3-208ENST00000594387 RRP1P56182 461 aaKnown RBP21.14■□□□□ 0.97
IRF3-208ENST00000594387 TMED8Q6PL24 325 aaPredicted RBP21.14■□□□□ 0.97
IRF3-208ENST00000594387 TEX11Q8IYF3 940 aa21.14■□□□□ 0.97
IRF3-208ENST00000594387 ZKSCAN4Q969J2 545 aaPredicted RBP21.14■□□□□ 0.97
IRF3-208ENST00000594387 LRRCC1Q9C099 1032 aa21.14■□□□□ 0.97
IRF3-208ENST00000594387 CERS3Q8IU89 383 aa21.13■□□□□ 0.97
IRF3-208ENST00000594387 AATFQ9NY61 560 aaKnown RBP eCLIP21.13■□□□□ 0.97
IRF3-208ENST00000594387 FOCADQ5VW36 1801 aa21.13■□□□□ 0.97
IRF3-208ENST00000594387 SPDYE5A6NIY4 337 aa21.12■□□□□ 0.97
IRF3-208ENST00000594387 CYP7A1P22680 504 aa21.12■□□□□ 0.97
IRF3-208ENST00000594387 RHBDL3P58872 404 aa21.12■□□□□ 0.97
IRF3-208ENST00000594387 DGKZQ13574 1117 aa21.12■□□□□ 0.97
IRF3-208ENST00000594387 ZFPM1Q8IX07 1006 aa21.12■□□□□ 0.97
IRF3-208ENST00000594387 ZNF384Q8TF68 577 aa21.12■□□□□ 0.97
IRF3-208ENST00000594387 PIH1D3Q9NQM4 214 aaKnown RBP21.12■□□□□ 0.97
IRF3-208ENST00000594387 SNCAIPQ9Y6H5 919 aa21.12■□□□□ 0.97
IRF3-208ENST00000594387 MYH1P12882 1939 aa21.12■□□□□ 0.97
IRF3-208ENST00000594387 CCL15-CCL14A0A0B4J2E2 113 aa21.11■□□□□ 0.97
IRF3-208ENST00000594387 CETPP11597 493 aa21.11■□□□□ 0.97
IRF3-208ENST00000594387 GJA5P36382 358 aa21.11■□□□□ 0.97
IRF3-208ENST00000594387 PPATQ06203 517 aa21.11■□□□□ 0.97
IRF3-208ENST00000594387 CCL15Q16663 113 aa21.11■□□□□ 0.97
IRF3-208ENST00000594387 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.11■□□□□ 0.97
IRF3-208ENST00000594387 ZNF112Q9UJU3 913 aa21.11■□□□□ 0.97
IRF3-208ENST00000594387 GPR25O00155 361 aa21.1■□□□□ 0.97
IRF3-208ENST00000594387 INPP5BP32019 993 aa21.1■□□□□ 0.97
IRF3-208ENST00000594387 PPP4CP60510 307 aa21.1■□□□□ 0.97
IRF3-208ENST00000594387 PPIL2Q13356 520 aa21.1■□□□□ 0.97
IRF3-208ENST00000594387 SNAPC2Q13487 334 aa21.1■□□□□ 0.97
IRF3-208ENST00000594387 NOM1Q5C9Z4 860 aaKnown RBP21.1■□□□□ 0.97
IRF3-208ENST00000594387 CFHR5Q9BXR6 569 aa21.1■□□□□ 0.97
IRF3-208ENST00000594387 DDX4Q9NQI0 724 aaKnown RBP21.1■□□□□ 0.97
IRF3-208ENST00000594387 PICK1Q9NRD5 415 aa21.1■□□□□ 0.97
IRF3-208ENST00000594387 TESPA1A2RU30 521 aaPredicted RBP21.09■□□□□ 0.97
IRF3-208ENST00000594387 DDTLA6NHG4 134 aaPredicted RBP21.09■□□□□ 0.97
IRF3-208ENST00000594387 FKTNO75072 461 aa21.09■□□□□ 0.97
IRF3-208ENST00000594387 MAGEB6Q8N7X4 407 aa21.09■□□□□ 0.97
IRF3-208ENST00000594387 SH3RF3Q8TEJ3 882 aaPredicted RBP21.09■□□□□ 0.97
IRF3-208ENST00000594387 CNKSR2Q8WXI2 1034 aa21.09■□□□□ 0.97
IRF3-208ENST00000594387 DNAJC2Q99543 621 aaKnown RBP21.09■□□□□ 0.97
IRF3-208ENST00000594387 TRIM34Q9BYJ4 488 aa21.09■□□□□ 0.97
IRF3-208ENST00000594387 OSBPL5Q9H0X9 879 aaPredicted RBP21.09■□□□□ 0.97
IRF3-208ENST00000594387 DHX36Q9H2U1 1008 aaKnown RBP21.09■□□□□ 0.97
IRF3-208ENST00000594387 ZBTB47Q9UFB7 747 aaPredicted RBP21.09■□□□□ 0.97
IRF3-208ENST00000594387 MYH7P12883 1935 aa21.09■□□□□ 0.97
IRF3-208ENST00000594387 DOCK1Q14185 1865 aa21.09■□□□□ 0.97
IRF3-208ENST00000594387 RFX7Q2KHR2 1363 aa21.09■□□□□ 0.97
IRF3-208ENST00000594387 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.08■□□□□ 0.97
IRF3-208ENST00000594387 NDUFB9Q9Y6M9 179 aa21.08■□□□□ 0.97
IRF3-208ENST00000594387 ATAD5Q96QE3 1844 aa21.08■□□□□ 0.96
IRF3-208ENST00000594387 IGF2BP3O00425 579 aaKnown RBP eCLIP21.07■□□□□ 0.96
IRF3-208ENST00000594387 TBC1D12O60347 775 aa21.07■□□□□ 0.96
IRF3-208ENST00000594387 NOL9Q5SY16 702 aaKnown RBP21.07■□□□□ 0.96
IRF3-208ENST00000594387 SH3BP5LQ7L8J4 393 aa21.07■□□□□ 0.96
IRF3-208ENST00000594387 CTU1Q7Z7A3 348 aaKnown RBP21.07■□□□□ 0.96
IRF3-208ENST00000594387 TGFBRAP1Q8WUH2 860 aa21.07■□□□□ 0.96
IRF3-208ENST00000594387 ZNF296Q8WUU4 475 aaPredicted RBP21.07■□□□□ 0.96
IRF3-208ENST00000594387 ABHD8Q96I13 439 aa21.07■□□□□ 0.96
IRF3-208ENST00000594387 GPATCH3Q96I76 525 aa21.07■□□□□ 0.96
IRF3-208ENST00000594387 MS4A4AQ96JQ5 239 aa21.07■□□□□ 0.96
IRF3-208ENST00000594387 MCOLN1Q9GZU1 580 aa21.07■□□□□ 0.96
IRF3-208ENST00000594387 ANTXR1Q9H6X2 564 aa21.07■□□□□ 0.96
IRF3-208ENST00000594387 DCTPP1Q9H773 170 aa21.07■□□□□ 0.96
IRF3-208ENST00000594387 ATRNL1Q5VV63 1379 aa21.07■□□□□ 0.96
IRF3-208ENST00000594387 COL2A1P02458 1487 aaPredicted RBP21.07■□□□□ 0.96
IRF3-208ENST00000594387 GOLIM4O00461 696 aa21.06■□□□□ 0.96
IRF3-208ENST00000594387 IRF6O14896 467 aa21.06■□□□□ 0.96
IRF3-208ENST00000594387 CTNND1O60716 968 aaKnown RBP21.06■□□□□ 0.96
IRF3-208ENST00000594387 USP5P45974 858 aa21.06■□□□□ 0.96
IRF3-208ENST00000594387 TAF1CQ15572 869 aaPredicted RBP21.06■□□□□ 0.96
IRF3-208ENST00000594387 SCYL3Q8IZE3 742 aa21.06■□□□□ 0.96
IRF3-208ENST00000594387 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.06■□□□□ 0.962e-6■■■■□ 19.7
IRF3-208ENST00000594387 ZFYVE28Q9HCC9 887 aa21.06■□□□□ 0.96
IRF3-208ENST00000594387 PI4KBQ9UBF8 816 aa21.06■□□□□ 0.96
IRF3-208ENST00000594387 HLA-DOAP06340 250 aa21.05■□□□□ 0.96
IRF3-208ENST00000594387 ATP5JP18859 108 aa21.05■□□□□ 0.96
IRF3-208ENST00000594387 MAP3K10Q02779 954 aa21.05■□□□□ 0.96
IRF3-208ENST00000594387 SLC9C2Q5TAH2 1124 aa21.05■□□□□ 0.96
IRF3-208ENST00000594387 MAPKAPK5Q8IW41 473 aa21.05■□□□□ 0.96
IRF3-208ENST00000594387 BOLA2Q9H3K6 86 aa21.05■□□□□ 0.96
IRF3-208ENST00000594387 HERC5Q9UII4 1024 aaKnown RBP21.05■□□□□ 0.96
IRF3-208ENST00000594387 PKN2Q16513 984 aaKnown RBP21.04■□□□□ 0.96
IRF3-208ENST00000594387 ADGRA1Q86SQ6 560 aa21.04■□□□□ 0.96
IRF3-208ENST00000594387 CRACR2BQ8N4Y2 399 aaPredicted RBP21.04■□□□□ 0.96
IRF3-208ENST00000594387 MIGA1Q8NAN2 632 aa21.04■□□□□ 0.96
IRF3-208ENST00000594387 BRI3BPQ8WY22 251 aa21.04■□□□□ 0.96
IRF3-208ENST00000594387 PTPN18Q99952 460 aa21.04■□□□□ 0.96
IRF3-208ENST00000594387 PAG1Q9NWQ8 432 aa21.04■□□□□ 0.96
IRF3-208ENST00000594387 CCDC85CA6NKD9 419 aa21.03■□□□□ 0.96
IRF3-208ENST00000594387 PHF20L1A8MW92 1017 aa21.03■□□□□ 0.96
IRF3-208ENST00000594387 SMARCA5O60264 1052 aaPredicted RBP21.03■□□□□ 0.96
IRF3-208ENST00000594387 DYNLL1P63167 89 aaKnown RBP21.03■□□□□ 0.96
IRF3-208ENST00000594387 CRHR2Q13324 411 aa21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms