RNA–Protein interactions for RNA: ENST00000593827.1

COPE-204, Transcript of coatomer protein complex subunit epsilon, humanhuman

TSL 3

Gene COPE, Length 601 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-204ENST00000593827 NOM1Q5C9Z4 860 aaKnown RBP24.43■■□□□ 1.5
COPE-204ENST00000593827 IFNL1Q8IU54 200 aa24.43■■□□□ 1.5
COPE-204ENST00000593827 TEX11Q8IYF3 940 aa24.43■■□□□ 1.5
COPE-204ENST00000593827 ZNF384Q8TF68 577 aa24.43■■□□□ 1.5
COPE-204ENST00000593827 CFHR5Q9BXR6 569 aa24.43■■□□□ 1.5
COPE-204ENST00000593827 RFX7Q2KHR2 1363 aa24.42■■□□□ 1.5
COPE-204ENST00000593827 PPP4CP60510 307 aa24.42■■□□□ 1.5
COPE-204ENST00000593827 ZNF112Q9UJU3 913 aa24.42■■□□□ 1.5
COPE-204ENST00000593827 MYH2Q9UKX2 1941 aa24.41■■□□□ 1.5
COPE-204ENST00000593827 PPATQ06203 517 aa24.41■■□□□ 1.5
COPE-204ENST00000593827 OTUD5Q96G74 571 aa24.41■■□□□ 1.5
COPE-204ENST00000593827 PIH1D3Q9NQM4 214 aaKnown RBP24.41■■□□□ 1.5
COPE-204ENST00000593827 SNCAIPQ9Y6H5 919 aa24.41■■□□□ 1.5
COPE-204ENST00000593827 TESPA1A2RU30 521 aaPredicted RBP24.4■■□□□ 1.5
COPE-204ENST00000593827 CYP7A1P22680 504 aa24.4■■□□□ 1.5
COPE-204ENST00000593827 PPIL2Q13356 520 aa24.4■■□□□ 1.5
COPE-204ENST00000593827 ZFPM1Q8IX07 1006 aa24.4■■□□□ 1.5
COPE-204ENST00000593827 ZKSCAN4Q969J2 545 aaPredicted RBP24.4■■□□□ 1.5
COPE-204ENST00000593827 BCL11AQ9H165 835 aa24.4■■□□□ 1.5
COPE-204ENST00000593827 DHX36Q9H2U1 1008 aaKnown RBP24.4■■□□□ 1.5
COPE-204ENST00000593827 DDX4Q9NQI0 724 aaKnown RBP24.4■■□□□ 1.5
COPE-204ENST00000593827 AATFQ9NY61 560 aaKnown RBP eCLIP24.4■■□□□ 1.5
COPE-204ENST00000593827 CETPP11597 493 aa24.39■■□□□ 1.49
COPE-204ENST00000593827 GJA5P36382 358 aa24.39■■□□□ 1.49
COPE-204ENST00000593827 SNAPC2Q13487 334 aa24.39■■□□□ 1.49
COPE-204ENST00000593827 AAMPQ13685 434 aa24.39■■□□□ 1.49
COPE-204ENST00000593827 NOL9Q5SY16 702 aaKnown RBP24.39■■□□□ 1.49
COPE-204ENST00000593827 OSBPL5Q9H0X9 879 aaPredicted RBP24.39■■□□□ 1.49
COPE-204ENST00000593827 DCTPP1Q9H773 170 aa24.39■■□□□ 1.49
COPE-204ENST00000593827 ATRNL1Q5VV63 1379 aa24.39■■□□□ 1.49
COPE-204ENST00000593827 AKAP11Q9UKA4 1901 aa24.39■■□□□ 1.49
COPE-204ENST00000593827 COL2A1P02458 1487 aaPredicted RBP24.38■■□□□ 1.49
COPE-204ENST00000593827 TBC1D12O60347 775 aa24.38■■□□□ 1.49
COPE-204ENST00000593827 TBC1D8O95759 1140 aa24.38■■□□□ 1.49
COPE-204ENST00000593827 MAP3K10Q02779 954 aa24.38■■□□□ 1.49
COPE-204ENST00000593827 GPATCH3Q96I76 525 aa24.38■■□□□ 1.49
COPE-204ENST00000593827 PICK1Q9NRD5 415 aa24.38■■□□□ 1.49
COPE-204ENST00000593827 CCL15-CCL14A0A0B4J2E2 113 aa24.37■■□□□ 1.49
COPE-204ENST00000593827 DDTLA6NHG4 134 aaPredicted RBP24.37■■□□□ 1.49
COPE-204ENST00000593827 INPP5BP32019 993 aa24.37■■□□□ 1.49
COPE-204ENST00000593827 CCL15Q16663 113 aa24.37■■□□□ 1.49
COPE-204ENST00000593827 MAGEB6Q8N7X4 407 aa24.37■■□□□ 1.49
COPE-204ENST00000593827 SH3RF3Q8TEJ3 882 aaPredicted RBP24.37■■□□□ 1.49
COPE-204ENST00000593827 MS4A4AQ96JQ5 239 aa24.37■■□□□ 1.49
COPE-204ENST00000593827 GPR25O00155 361 aa24.36■■□□□ 1.49
COPE-204ENST00000593827 ATP5JP18859 108 aa24.36■■□□□ 1.49
COPE-204ENST00000593827 DNAJC2Q99543 621 aaKnown RBP24.36■■□□□ 1.49
COPE-204ENST00000593827 ZCCHC17Q9NP64 241 aaKnown RBP24.36■■□□□ 1.49
COPE-204ENST00000593827 HERC5Q9UII4 1024 aaKnown RBP24.36■■□□□ 1.49
COPE-204ENST00000593827 IGF2BP3O00425 579 aaKnown RBP eCLIP24.35■■□□□ 1.49
COPE-204ENST00000593827 CTNND1O60716 968 aaKnown RBP24.35■■□□□ 1.49
COPE-204ENST00000593827 DGKZQ13574 1117 aa24.35■■□□□ 1.49
COPE-204ENST00000593827 SH3BP5LQ7L8J4 393 aa24.35■■□□□ 1.49
COPE-204ENST00000593827 SCYL3Q8IZE3 742 aa24.35■■□□□ 1.49
COPE-204ENST00000593827 CNKSR2Q8WXI2 1034 aa24.35■■□□□ 1.49
COPE-204ENST00000593827 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.35■■□□□ 1.49
COPE-204ENST00000593827 XPO5Q9HAV4 1204 aaKnown RBP eCLIP24.35■■□□□ 1.49
COPE-204ENST00000593827 PI4KBQ9UBF8 816 aa24.35■■□□□ 1.49
COPE-204ENST00000593827 ZBTB47Q9UFB7 747 aaPredicted RBP24.35■■□□□ 1.49
COPE-204ENST00000593827 GOLIM4O00461 696 aa24.34■■□□□ 1.49
COPE-204ENST00000593827 FKTNO75072 461 aa24.34■■□□□ 1.49
COPE-204ENST00000593827 TGFBRAP1Q8WUH2 860 aa24.34■■□□□ 1.49
COPE-204ENST00000593827 TRIM34Q9BYJ4 488 aa24.34■■□□□ 1.49
COPE-204ENST00000593827 ANTXR1Q9H6X2 564 aa24.34■■□□□ 1.49
COPE-204ENST00000593827 MAST2Q6P0Q8 1798 aa24.34■■□□□ 1.49
COPE-204ENST00000593827 PHF20L1A8MW92 1017 aa24.33■■□□□ 1.49
COPE-204ENST00000593827 IRF6O14896 467 aa24.33■■□□□ 1.49
COPE-204ENST00000593827 HLA-DOAP06340 250 aa24.33■■□□□ 1.49
COPE-204ENST00000593827 SLC9C2Q5TAH2 1124 aa24.33■■□□□ 1.49
COPE-204ENST00000593827 CTU1Q7Z7A3 348 aaKnown RBP24.33■■□□□ 1.49
COPE-204ENST00000593827 ZNF296Q8WUU4 475 aaPredicted RBP24.33■■□□□ 1.49
COPE-204ENST00000593827 BRI3BPQ8WY22 251 aa24.33■■□□□ 1.49
COPE-204ENST00000593827 PAG1Q9NWQ8 432 aa24.33■■□□□ 1.49
COPE-204ENST00000593827 NDUFB9Q9Y6M9 179 aa24.33■■□□□ 1.49
COPE-204ENST00000593827 CXCL11O14625 94 aa24.32■■□□□ 1.48
COPE-204ENST00000593827 USP5P45974 858 aa24.32■■□□□ 1.48
COPE-204ENST00000593827 PKN2Q16513 984 aaKnown RBP24.32■■□□□ 1.48
COPE-204ENST00000593827 ADGRA1Q86SQ6 560 aa24.32■■□□□ 1.48
COPE-204ENST00000593827 HAUS7Q99871 368 aa24.32■■□□□ 1.48
COPE-204ENST00000593827 ZFYVE28Q9HCC9 887 aa24.32■■□□□ 1.48
COPE-204ENST00000593827 FLT1P17948 1338 aa24.32■■□□□ 1.48
COPE-204ENST00000593827 FOXP4Q8IVH2 680 aaPredicted RBP24.31■■□□□ 1.48
COPE-204ENST00000593827 ABHD8Q96I13 439 aa24.31■■□□□ 1.48
COPE-204ENST00000593827 CRBNQ96SW2 442 aa24.31■■□□□ 1.48
COPE-204ENST00000593827 PTPN18Q99952 460 aa24.31■■□□□ 1.48
COPE-204ENST00000593827 TBC1D2Q9BYX2 928 aa24.31■■□□□ 1.48
COPE-204ENST00000593827 MCOLN1Q9GZU1 580 aa24.31■■□□□ 1.48
COPE-204ENST00000593827 BOLA2Q9H3K6 86 aa24.31■■□□□ 1.48
COPE-204ENST00000593827 ECHDC1Q9NTX5 307 aa24.31■■□□□ 1.48
COPE-204ENST00000593827 KCNH4Q9UQ05 1017 aa24.31■■□□□ 1.48
COPE-204ENST00000593827 OTOFQ9HC10 1997 aa24.31■■□□□ 1.48
COPE-204ENST00000593827 AK9Q5TCS8 1911 aa24.3■■□□□ 1.48
COPE-204ENST00000593827 TAF1CQ15572 869 aaPredicted RBP24.3■■□□□ 1.48
COPE-204ENST00000593827 ZSCAN25Q6NSZ9 544 aa24.3■■□□□ 1.48
COPE-204ENST00000593827 MAPKAPK5Q8IW41 473 aa24.3■■□□□ 1.48
COPE-204ENST00000593827 CRACR2BQ8N4Y2 399 aaPredicted RBP24.3■■□□□ 1.48
COPE-204ENST00000593827 MIGA1Q8NAN2 632 aa24.3■■□□□ 1.48
COPE-204ENST00000593827 PCDHB15Q9Y5E8 787 aa24.3■■□□□ 1.48
COPE-204ENST00000593827 MAGEB6P1A0A0J9YX57 407 aa24.29■■□□□ 1.48
COPE-204ENST00000593827 SMARCA5O60264 1052 aaPredicted RBP24.29■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms