RNA–Protein interactions for RNA: ENST00000593700.5

CAPN12-202, Transcript of calpain 12, humanhuman

TSL 1 (best)

Gene CAPN12, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN12-202ENST00000593700 TM6SF1Q9BZW5 370 aa17.42■□□□□ 0.38
CAPN12-202ENST00000593700 PALD1Q9ULE6 856 aa17.42■□□□□ 0.38
CAPN12-202ENST00000593700 GAKO14976 1311 aa17.42■□□□□ 0.38
CAPN12-202ENST00000593700 COL4A5P29400 1685 aa17.42■□□□□ 0.38
CAPN12-202ENST00000593700 ZNF213O14771 459 aa17.41■□□□□ 0.38
CAPN12-202ENST00000593700 HMGB1P09429 215 aaKnown RBP17.41■□□□□ 0.38
CAPN12-202ENST00000593700 RPS12P25398 132 aaKnown RBP17.41■□□□□ 0.38
CAPN12-202ENST00000593700 MCM2P49736 904 aa17.41■□□□□ 0.38
CAPN12-202ENST00000593700 HDLBPQ00341 1268 aaKnown RBP17.41■□□□□ 0.38
CAPN12-202ENST00000593700 DACT2Q5SW24 774 aa17.41■□□□□ 0.38
CAPN12-202ENST00000593700 FAM163AQ96GL9 167 aaPredicted RBP17.41■□□□□ 0.38
CAPN12-202ENST00000593700 ATP8A2Q9NTI2 1148 aa17.41■□□□□ 0.38
CAPN12-202ENST00000593700 HDAC9Q9UKV0 1011 aa17.41■□□□□ 0.38
CAPN12-202ENST00000593700 SCN4AP35499 1836 aa17.41■□□□□ 0.38
CAPN12-202ENST00000593700 VEGFAP15692 232 aaPredicted RBP17.4■□□□□ 0.38
CAPN12-202ENST00000593700 LMOD1P29536 600 aaPredicted RBP17.4■□□□□ 0.38
CAPN12-202ENST00000593700 BTDP43251 543 aa17.4■□□□□ 0.38
CAPN12-202ENST00000593700 PPP4CP60510 307 aa17.4■□□□□ 0.38
CAPN12-202ENST00000593700 DIXDC1Q155Q3 683 aa17.4■□□□□ 0.38
CAPN12-202ENST00000593700 HHIPL2Q6UWX4 724 aa17.4■□□□□ 0.38
CAPN12-202ENST00000593700 IFNL3Q8IZI9 196 aa17.4■□□□□ 0.38
CAPN12-202ENST00000593700 ZNF384Q8TF68 577 aa17.4■□□□□ 0.38
CAPN12-202ENST00000593700 SNX21Q969T3 373 aa17.4■□□□□ 0.38
CAPN12-202ENST00000593700 JAKMIP1Q96N16 626 aaKnown RBP17.4■□□□□ 0.38
CAPN12-202ENST00000593700 ZNF541Q9H0D2 1346 aa17.4■□□□□ 0.38
CAPN12-202ENST00000593700 GPR75-ASB3A0A0A6YYF3 556 aa17.39■□□□□ 0.37
CAPN12-202ENST00000593700 YDJCA8MPS7 323 aa17.39■□□□□ 0.37
CAPN12-202ENST00000593700 F8W031 263 aaPredicted RBP17.39■□□□□ 0.37
CAPN12-202ENST00000593700 FGAP02671 866 aa17.39■□□□□ 0.37
CAPN12-202ENST00000593700 CYP21A2P08686 494 aa17.39■□□□□ 0.37
CAPN12-202ENST00000593700 CASTP20810 708 aaKnown RBP17.39■□□□□ 0.37
CAPN12-202ENST00000593700 USP5P45974 858 aa17.39■□□□□ 0.37
CAPN12-202ENST00000593700 CXCL9Q07325 125 aa17.39■□□□□ 0.37
CAPN12-202ENST00000593700 TRDNQ13061 729 aa17.39■□□□□ 0.37
CAPN12-202ENST00000593700 BLOC1S2Q6QNY1 142 aa17.39■□□□□ 0.37
CAPN12-202ENST00000593700 CERS5Q8N5B7 392 aa17.39■□□□□ 0.37
CAPN12-202ENST00000593700 ARPP21Q9UBL0 812 aaPredicted RBP17.39■□□□□ 0.37
CAPN12-202ENST00000593700 CYP46A1Q9Y6A2 500 aa17.39■□□□□ 0.37
CAPN12-202ENST00000593700 GSG1L2A8MUP6 293 aa17.38■□□□□ 0.37
CAPN12-202ENST00000593700 DDNO94850 711 aaPredicted RBP17.38■□□□□ 0.37
CAPN12-202ENST00000593700 NEK4P51957 841 aa17.38■□□□□ 0.37
CAPN12-202ENST00000593700 DYNLL1P63167 89 aaKnown RBP17.38■□□□□ 0.37
CAPN12-202ENST00000593700 RSBN1LQ6PCB5 846 aaPredicted RBP17.38■□□□□ 0.37
CAPN12-202ENST00000593700 RALYLQ86SE5 291 aaKnown RBP17.38■□□□□ 0.37
CAPN12-202ENST00000593700 KIAA0825Q8IV33 1275 aa17.38■□□□□ 0.37
CAPN12-202ENST00000593700 DPF2Q92785 391 aa17.38■□□□□ 0.37
CAPN12-202ENST00000593700 MRIQ9BWK5 157 aa17.38■□□□□ 0.37
CAPN12-202ENST00000593700 RNF41Q9H4P4 317 aaPredicted RBP17.38■□□□□ 0.37
CAPN12-202ENST00000593700 DAGLAQ9Y4D2 1042 aa17.38■□□□□ 0.37
CAPN12-202ENST00000593700 GJA3Q9Y6H8 435 aa17.38■□□□□ 0.37
CAPN12-202ENST00000593700 FOXP2O15409 715 aa17.37■□□□□ 0.37
CAPN12-202ENST00000593700 SLC3A2P08195 630 aaKnown RBP17.37■□□□□ 0.37
CAPN12-202ENST00000593700 VIL1P09327 827 aaKnown RBP17.37■□□□□ 0.37
CAPN12-202ENST00000593700 GRIK5Q16478 980 aa17.37■□□□□ 0.37
CAPN12-202ENST00000593700 OGFOD1Q8N543 542 aa17.37■□□□□ 0.37
CAPN12-202ENST00000593700 AGBL3Q8NEM8 1001 aa17.37■□□□□ 0.37
CAPN12-202ENST00000593700 ZNF526Q8TF50 670 aaPredicted RBP17.37■□□□□ 0.37
CAPN12-202ENST00000593700 SDR42E1Q8WUS8 393 aa17.37■□□□□ 0.37
CAPN12-202ENST00000593700 NEK1Q96PY6 1258 aa17.37■□□□□ 0.37
CAPN12-202ENST00000593700 CNNM2Q9H8M5 875 aa17.37■□□□□ 0.37
CAPN12-202ENST00000593700 EPB41L4AQ9HCS5 686 aaPredicted RBP17.37■□□□□ 0.37
CAPN12-202ENST00000593700 HACL1Q9UJ83 578 aa17.37■□□□□ 0.37
CAPN12-202ENST00000593700 SERPINA10Q9UK55 444 aa17.37■□□□□ 0.37
CAPN12-202ENST00000593700 PCDHB8Q9UN66 801 aa17.37■□□□□ 0.37
CAPN12-202ENST00000593700 PCDHB13Q9Y5F0 798 aa17.37■□□□□ 0.37
CAPN12-202ENST00000593700 PSMD14O00487 310 aa17.36■□□□□ 0.37
CAPN12-202ENST00000593700 RAD17O75943 681 aa17.36■□□□□ 0.37
CAPN12-202ENST00000593700 PCP11498 1178 aaKnown RBP17.36■□□□□ 0.37
CAPN12-202ENST00000593700 PRKAR2AP13861 404 aaKnown RBP17.36■□□□□ 0.37
CAPN12-202ENST00000593700 CRKP46108 304 aa17.36■□□□□ 0.37
CAPN12-202ENST00000593700 PDAP1Q13442 181 aaKnown RBP17.36■□□□□ 0.37
CAPN12-202ENST00000593700 RUFY3Q7L099 469 aa17.36■□□□□ 0.37
CAPN12-202ENST00000593700 PNMA8AQ86V59 439 aaPredicted RBP17.36■□□□□ 0.37
CAPN12-202ENST00000593700 TEX11Q8IYF3 940 aa17.36■□□□□ 0.37
CAPN12-202ENST00000593700 NCOA7Q8NI08 942 aa17.36■□□□□ 0.37
CAPN12-202ENST00000593700 ZSWIM6Q9HCJ5 1215 aa17.36■□□□□ 0.37
CAPN12-202ENST00000593700 K7ELQ4 463 aaPredicted RBP17.35■□□□□ 0.37
CAPN12-202ENST00000593700 PRKAB2O43741 272 aa17.35■□□□□ 0.37
CAPN12-202ENST00000593700 SCNN1DP51172 638 aa17.35■□□□□ 0.37
CAPN12-202ENST00000593700 RBM5P52756 815 aaKnown RBP eCLIP17.35■□□□□ 0.37
CAPN12-202ENST00000593700 HAND2P61296 217 aa17.35■□□□□ 0.37
CAPN12-202ENST00000593700 ANKRD1Q15327 319 aa17.35■□□□□ 0.37
CAPN12-202ENST00000593700 SH3RF3Q8TEJ3 882 aaPredicted RBP17.35■□□□□ 0.37
CAPN12-202ENST00000593700 ZDHHC15Q96MV8 337 aa17.35■□□□□ 0.37
CAPN12-202ENST00000593700 UPF3BQ9BZI7 483 aaKnown RBP17.35■□□□□ 0.37
CAPN12-202ENST00000593700 RRAGCQ9HB90 399 aa17.35■□□□□ 0.37
CAPN12-202ENST00000593700 E7EWF7 191 aa17.34■□□□□ 0.37
CAPN12-202ENST00000593700 H7C1D1 291 aa17.34■□□□□ 0.37
CAPN12-202ENST00000593700 NT5C2P49902 561 aa17.34■□□□□ 0.37
CAPN12-202ENST00000593700 PPARAQ07869 468 aa17.34■□□□□ 0.37
CAPN12-202ENST00000593700 MXD3Q9BW11 206 aa17.34■□□□□ 0.37
CAPN12-202ENST00000593700 TBC1D2Q9BYX2 928 aa17.34■□□□□ 0.37
CAPN12-202ENST00000593700 DCP1AQ9NPI6 582 aaPredicted RBP17.34■□□□□ 0.37
CAPN12-202ENST00000593700 KCNQ5Q9NR82 932 aa17.34■□□□□ 0.37
CAPN12-202ENST00000593700 PDRG1Q9NUG6 133 aa17.34■□□□□ 0.37
CAPN12-202ENST00000593700 TMOD2Q9NZR1 351 aa17.34■□□□□ 0.37
CAPN12-202ENST00000593700 HSP90AA1P07900 732 aaKnown RBP17.33■□□□□ 0.36
CAPN12-202ENST00000593700 RPS6KB1P23443 525 aa17.33■□□□□ 0.36
CAPN12-202ENST00000593700 FGD1P98174 961 aa17.33■□□□□ 0.36
CAPN12-202ENST00000593700 ADCK5Q3MIX3 580 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms