RNA–Protein interactions for RNA: ENST00000593104.5

PRKCSH-220, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 4

Gene PRKCSH, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-220ENST00000593104 RNF208Q9H0X6 261 aa13.97□□□□□ -0.17
PRKCSH-220ENST00000593104 UNC93B1Q9H1C4 597 aa13.97□□□□□ -0.17
PRKCSH-220ENST00000593104 CEP126Q9P2H0 1117 aa13.97□□□□□ -0.17
PRKCSH-220ENST00000593104 ABCF2Q9UG63 623 aa13.97□□□□□ -0.17
PRKCSH-220ENST00000593104 DOCK1Q14185 1865 aa13.97□□□□□ -0.17
PRKCSH-220ENST00000593104 RFX7Q2KHR2 1363 aa13.96□□□□□ -0.17
PRKCSH-220ENST00000593104 PTPRAP18433 802 aa13.96□□□□□ -0.17
PRKCSH-220ENST00000593104 BTDP43251 543 aa13.96□□□□□ -0.17
PRKCSH-220ENST00000593104 PI16Q6UXB8 463 aa13.96□□□□□ -0.17
PRKCSH-220ENST00000593104 SCYL3Q8IZE3 742 aa13.96□□□□□ -0.17
PRKCSH-220ENST00000593104 PARK7Q99497 189 aaKnown RBP13.96□□□□□ -0.17
PRKCSH-220ENST00000593104 RBM27Q9P2N5 1060 aaKnown RBP13.96□□□□□ -0.17
PRKCSH-220ENST00000593104 DOCK3Q8IZD9 2030 aa13.96□□□□□ -0.17
PRKCSH-220ENST00000593104 SALL1Q9NSC2 1324 aa13.95□□□□□ -0.18
PRKCSH-220ENST00000593104 A0A0G2JLL6 359 aaPredicted RBP13.95□□□□□ -0.18
PRKCSH-220ENST00000593104 TRIM75PA6NK02 468 aa13.95□□□□□ -0.18
PRKCSH-220ENST00000593104 CIAO1O76071 339 aa13.95□□□□□ -0.18
PRKCSH-220ENST00000593104 GNRH1P01148 92 aa13.95□□□□□ -0.18
PRKCSH-220ENST00000593104 PRMT2P55345 433 aa13.95□□□□□ -0.18
PRKCSH-220ENST00000593104 FCGRTP55899 365 aa13.95□□□□□ -0.18
PRKCSH-220ENST00000593104 PRRT2Q7Z6L0 340 aaPredicted RBP13.95□□□□□ -0.18
PRKCSH-220ENST00000593104 DZIP1Q86YF9 867 aaKnown RBP13.95□□□□□ -0.18
PRKCSH-220ENST00000593104 ZNF384Q8TF68 577 aa13.95□□□□□ -0.18
PRKCSH-220ENST00000593104 GNL3LQ9NVN8 582 aaKnown RBP13.95□□□□□ -0.18
PRKCSH-220ENST00000593104 TAOK2Q9UL54 1235 aa13.95□□□□□ -0.18
PRKCSH-220ENST00000593104 DENND2AQ9ULE3 1009 aa13.95□□□□□ -0.18
PRKCSH-220ENST00000593104 TNNQ9UQP3 1299 aa13.95□□□□□ -0.18
PRKCSH-220ENST00000593104 AFG3L2Q9Y4W6 797 aa13.95□□□□□ -0.18
PRKCSH-220ENST00000593104 GAKO14976 1311 aa13.94□□□□□ -0.18
PRKCSH-220ENST00000593104 GJA8P48165 433 aa13.94□□□□□ -0.18
PRKCSH-220ENST00000593104 TFCP2Q12800 502 aa13.94□□□□□ -0.18
PRKCSH-220ENST00000593104 TREML2Q5T2D2 321 aa13.94□□□□□ -0.18
PRKCSH-220ENST00000593104 UBE2Q1Q7Z7E8 422 aa13.94□□□□□ -0.18
PRKCSH-220ENST00000593104 IDI2Q9BXS1 227 aa13.94□□□□□ -0.18
PRKCSH-220ENST00000593104 TRIOBPQ9H2D6 2365 aa13.93□□□□□ -0.18
PRKCSH-220ENST00000593104 CXCL11O14625 94 aa13.93□□□□□ -0.18
PRKCSH-220ENST00000593104 PEX10O60683 326 aa13.93□□□□□ -0.18
PRKCSH-220ENST00000593104 GJB1P08034 283 aa13.93□□□□□ -0.18
PRKCSH-220ENST00000593104 HOXD10P28358 340 aa13.93□□□□□ -0.18
PRKCSH-220ENST00000593104 IL15P40933 162 aaPredicted RBP13.93□□□□□ -0.18
PRKCSH-220ENST00000593104 FLT3LGP49771 235 aa13.93□□□□□ -0.18
PRKCSH-220ENST00000593104 RRP1BQ14684 758 aaKnown RBP13.93□□□□□ -0.18
PRKCSH-220ENST00000593104 ALDH1L2Q3SY69 923 aa13.93□□□□□ -0.18
PRKCSH-220ENST00000593104 TBC1D9Q6ZT07 1266 aa13.93□□□□□ -0.18
PRKCSH-220ENST00000593104 ANKRD13CQ8N6S4 541 aa13.93□□□□□ -0.18
PRKCSH-220ENST00000593104 U2AF1L4Q8WU68 220 aaKnown RBP13.93□□□□□ -0.18
PRKCSH-220ENST00000593104 PICK1Q9NRD5 415 aa13.93□□□□□ -0.18
PRKCSH-220ENST00000593104 ALPK3Q96L96 1907 aa13.92□□□□□ -0.18
PRKCSH-220ENST00000593104 A0A1B0GUL7 405 aa13.92□□□□□ -0.18
PRKCSH-220ENST00000593104 ADCY3O60266 1144 aa13.92□□□□□ -0.18
PRKCSH-220ENST00000593104 ENTPD3O75355 529 aa13.92□□□□□ -0.18
PRKCSH-220ENST00000593104 FARP2O94887 1054 aaPredicted RBP13.92□□□□□ -0.18
PRKCSH-220ENST00000593104 INHAP05111 366 aa13.92□□□□□ -0.18
PRKCSH-220ENST00000593104 MECOMQ03112 1051 aa13.92□□□□□ -0.18
PRKCSH-220ENST00000593104 XAGE2Q96GT9 111 aa13.92□□□□□ -0.18
PRKCSH-220ENST00000593104 ATAD5Q96QE3 1844 aa13.92□□□□□ -0.18
PRKCSH-220ENST00000593104 MROH7-TTC4A0A0A0MT08 1334 aa13.91□□□□□ -0.18
PRKCSH-220ENST00000593104 SEMA3EO15041 775 aa13.91□□□□□ -0.18
PRKCSH-220ENST00000593104 RHBDL3P58872 404 aa13.91□□□□□ -0.18
PRKCSH-220ENST00000593104 UBXN2AP68543 259 aa13.91□□□□□ -0.18
PRKCSH-220ENST00000593104 SMCR8Q8TEV9 937 aaPredicted RBP13.91□□□□□ -0.18
PRKCSH-220ENST00000593104 DIS3LQ8TF46 1054 aaKnown RBP13.91□□□□□ -0.18
PRKCSH-220ENST00000593104 DEFB118Q96PH6 123 aa13.91□□□□□ -0.18
PRKCSH-220ENST00000593104 COPRSQ9NQ92 184 aa13.91□□□□□ -0.18
PRKCSH-220ENST00000593104 TNPO2O14787 897 aaKnown RBP13.9□□□□□ -0.18
PRKCSH-220ENST00000593104 TRIM32Q13049 653 aa13.9□□□□□ -0.18
PRKCSH-220ENST00000593104 SHROOM1Q2M3G4 852 aaPredicted RBP13.9□□□□□ -0.18
PRKCSH-220ENST00000593104 FASTKD5Q7L8L6 764 aaKnown RBP13.9□□□□□ -0.18
PRKCSH-220ENST00000593104 SLAIN1Q8ND83 568 aa13.9□□□□□ -0.18
PRKCSH-220ENST00000593104 NEUROD6Q96NK8 337 aa13.9□□□□□ -0.18
PRKCSH-220ENST00000593104 FBXO3Q9UK99 471 aa13.9□□□□□ -0.18
PRKCSH-220ENST00000593104 SIPA1L1O43166 1804 aa13.9□□□□□ -0.18
PRKCSH-220ENST00000593104 SOX1O00570 391 aaPredicted RBP13.89□□□□□ -0.19
PRKCSH-220ENST00000593104 SRGAP3O43295 1099 aa13.89□□□□□ -0.19
PRKCSH-220ENST00000593104 CTNND1O60716 968 aaKnown RBP13.89□□□□□ -0.19
PRKCSH-220ENST00000593104 SGPL1O95470 568 aa13.89□□□□□ -0.19
PRKCSH-220ENST00000593104 MAP3K10Q02779 954 aa13.89□□□□□ -0.19
PRKCSH-220ENST00000593104 SPP2Q13103 211 aa13.89□□□□□ -0.19
PRKCSH-220ENST00000593104 ERICH6Q7L0X2 663 aa13.89□□□□□ -0.19
PRKCSH-220ENST00000593104 TRMT2AQ8IZ69 625 aaKnown RBP13.89□□□□□ -0.19
PRKCSH-220ENST00000593104 NKX2-3Q8TAU0 364 aa13.89□□□□□ -0.19
PRKCSH-220ENST00000593104 PRO3102Q9H379 93 aa13.89□□□□□ -0.19
PRKCSH-220ENST00000593104 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.89□□□□□ -0.19
PRKCSH-220ENST00000593104 HMG20BQ9P0W2 317 aa13.89□□□□□ -0.19
PRKCSH-220ENST00000593104 AGTPBP1Q9UPW5 1226 aa13.89□□□□□ -0.19
PRKCSH-220ENST00000593104 CEP290O15078 2479 aa13.89□□□□□ -0.19
PRKCSH-220ENST00000593104 GPR75-ASB3A0A0A6YYF3 556 aa13.88□□□□□ -0.19
PRKCSH-220ENST00000593104 ZBTB7BO15156 539 aaPredicted RBP13.88□□□□□ -0.19
PRKCSH-220ENST00000593104 TFRCP02786 760 aaKnown RBP13.88□□□□□ -0.19
PRKCSH-220ENST00000593104 HMGCS2P54868 508 aa13.88□□□□□ -0.19
PRKCSH-220ENST00000593104 ZGPATQ8N5A5 531 aaKnown RBP13.88□□□□□ -0.19
PRKCSH-220ENST00000593104 FAM163AQ96GL9 167 aaPredicted RBP13.88□□□□□ -0.19
PRKCSH-220ENST00000593104 API5Q9BZZ5 524 aaKnown RBP13.88□□□□□ -0.19
PRKCSH-220ENST00000593104 MYO5AQ9Y4I1 1855 aaKnown RBP13.88□□□□□ -0.19
PRKCSH-220ENST00000593104 LOC285556D6RIA3 1793 aa13.88□□□□□ -0.19
PRKCSH-220ENST00000593104 PNMA6EA0A0J9YXQ4 647 aa13.87□□□□□ -0.19
PRKCSH-220ENST00000593104 JAG1P78504 1218 aa13.87□□□□□ -0.19
PRKCSH-220ENST00000593104 NSUN4Q96CB9 384 aaKnown RBP13.87□□□□□ -0.19
PRKCSH-220ENST00000593104 LRCH3Q96II8 777 aa13.87□□□□□ -0.19
PRKCSH-220ENST00000593104 HTATIP2Q9BUP3 242 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms