RNA–Protein interactions for RNA: ENST00000592741.5

PRKCSH-217, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKCSH, Length 2,100 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-217ENST00000592741 C17orf53Q8N3J3 647 aaPredicted RBP19.22■□□□□ 0.67
PRKCSH-217ENST00000592741 KIAA1524Q8TCG1 905 aa19.22■□□□□ 0.67
PRKCSH-217ENST00000592741 WASF1Q92558 559 aa19.22■□□□□ 0.67
PRKCSH-217ENST00000592741 BSDC1Q9NW68 430 aaPredicted RBP19.22■□□□□ 0.67
PRKCSH-217ENST00000592741 ERICH2A1L162 156 aa19.21■□□□□ 0.67
PRKCSH-217ENST00000592741 RGL2O15211 777 aa19.21■□□□□ 0.67
PRKCSH-217ENST00000592741 WTAPQ15007 396 aa19.21■□□□□ 0.67
PRKCSH-217ENST00000592741 SLC26A6Q9BXS9 759 aa19.21■□□□□ 0.67
PRKCSH-217ENST00000592741 RAI14Q9P0K7 980 aa19.21■□□□□ 0.67
PRKCSH-217ENST00000592741 PYCARDQ9ULZ3 195 aa19.21■□□□□ 0.67
PRKCSH-217ENST00000592741 IQSEC3Q9UPP2 1182 aaPredicted RBP19.21■□□□□ 0.67
PRKCSH-217ENST00000592741 SCN7AQ01118 1682 aa19.21■□□□□ 0.67
PRKCSH-217ENST00000592741 CASZ1Q86V15 1759 aa19.21■□□□□ 0.67
PRKCSH-217ENST00000592741 CNTNAP4Q9C0A0 1308 aa19.21■□□□□ 0.67
PRKCSH-217ENST00000592741 FMNL1O95466 1100 aaPredicted RBP19.21■□□□□ 0.67
PRKCSH-217ENST00000592741 CMA1P23946 247 aa19.21■□□□□ 0.67
PRKCSH-217ENST00000592741 GYG1P46976 350 aa19.21■□□□□ 0.67
PRKCSH-217ENST00000592741 ZRSR1Q15695 479 aaKnown RBP19.21■□□□□ 0.67
PRKCSH-217ENST00000592741 CAVIN4Q5BKX8 364 aa19.21■□□□□ 0.67
PRKCSH-217ENST00000592741 CCDC186Q7Z3E2 898 aa19.21■□□□□ 0.67
PRKCSH-217ENST00000592741 JMYQ8N9B5 988 aa19.21■□□□□ 0.67
PRKCSH-217ENST00000592741 ABCF2Q9UG63 623 aa19.21■□□□□ 0.67
PRKCSH-217ENST00000592741 MAGEB6P1A0A0J9YX57 407 aa19.2■□□□□ 0.66
PRKCSH-217ENST00000592741 IFNAR1P17181 557 aa19.2■□□□□ 0.66
PRKCSH-217ENST00000592741 PPARAQ07869 468 aa19.2■□□□□ 0.66
PRKCSH-217ENST00000592741 FAM98CQ17RN3 349 aaKnown RBP19.2■□□□□ 0.66
PRKCSH-217ENST00000592741 AXDND1Q5T1B0 1012 aaPredicted RBP19.2■□□□□ 0.66
PRKCSH-217ENST00000592741 C3orf67Q6ZVT6 689 aa19.2■□□□□ 0.66
PRKCSH-217ENST00000592741 TMTC2Q8N394 836 aa19.2■□□□□ 0.66
PRKCSH-217ENST00000592741 CLIP2Q9UDT6 1046 aa19.2■□□□□ 0.66
PRKCSH-217ENST00000592741 PPP6R2O75170 966 aa19.19■□□□□ 0.66
PRKCSH-217ENST00000592741 GTF2E1P29083 439 aaPredicted RBP19.19■□□□□ 0.66
PRKCSH-217ENST00000592741 RTN1Q16799 776 aa19.19■□□□□ 0.66
PRKCSH-217ENST00000592741 DHX40Q8IX18 779 aaKnown RBP19.19■□□□□ 0.66
PRKCSH-217ENST00000592741 KIAA1468Q9P260 1216 aa19.19■□□□□ 0.66
PRKCSH-217ENST00000592741 ZNF202O95125 648 aa19.19■□□□□ 0.66
PRKCSH-217ENST00000592741 U2AF2P26368 475 aaKnown RBP eCLIP19.19■□□□□ 0.66
PRKCSH-217ENST00000592741 TRIM22Q8IYM9 498 aa19.19■□□□□ 0.66
PRKCSH-217ENST00000592741 TAOK2Q9UL54 1235 aa19.19■□□□□ 0.66
PRKCSH-217ENST00000592741 PFKFB1P16118 471 aa19.18■□□□□ 0.66
PRKCSH-217ENST00000592741 RCAN1P53805 252 aa19.18■□□□□ 0.66
PRKCSH-217ENST00000592741 BICDL1Q6ZP65 573 aa19.18■□□□□ 0.66
PRKCSH-217ENST00000592741 ADGRA1Q86SQ6 560 aa19.18■□□□□ 0.66
PRKCSH-217ENST00000592741 MRFAP1L1Q96HT8 127 aa19.18■□□□□ 0.66
PRKCSH-217ENST00000592741 ZKSCAN3Q9BRR0 538 aa19.18■□□□□ 0.66
PRKCSH-217ENST00000592741 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.18■□□□□ 0.66
PRKCSH-217ENST00000592741 MINPP1Q9UNW1 487 aa19.18■□□□□ 0.66
PRKCSH-217ENST00000592741 COL1A1P02452 1464 aaPredicted RBP19.18■□□□□ 0.66
PRKCSH-217ENST00000592741 CCDC196A0A1B0GTZ2 297 aa19.18■□□□□ 0.66
PRKCSH-217ENST00000592741 SLC3A2P08195 630 aaKnown RBP19.18■□□□□ 0.66
PRKCSH-217ENST00000592741 MARCKSP29966 332 aaPredicted RBP19.18■□□□□ 0.66
PRKCSH-217ENST00000592741 ERCC4Q92889 916 aaPredicted RBP19.18■□□□□ 0.66
PRKCSH-217ENST00000592741 ANAPC4Q9UJX5 808 aa19.18■□□□□ 0.66
PRKCSH-217ENST00000592741 MROH7-TTC4A0A0A0MT08 1334 aa19.17■□□□□ 0.66
PRKCSH-217ENST00000592741 A0A087WWV3 80 aa19.17■□□□□ 0.66
PRKCSH-217ENST00000592741 WDHD1O75717 1129 aaPredicted RBP19.17■□□□□ 0.66
PRKCSH-217ENST00000592741 SAFBQ15424 915 aaKnown RBP eCLIP19.17■□□□□ 0.66
PRKCSH-217ENST00000592741 SLC10A5Q5PT55 438 aa19.17■□□□□ 0.66
PRKCSH-217ENST00000592741 PRIMPOLQ96LW4 560 aa19.17■□□□□ 0.66
PRKCSH-217ENST00000592741 UBAC1Q9BSL1 405 aa19.17■□□□□ 0.66
PRKCSH-217ENST00000592741 NYXQ9GZU5 481 aa19.17■□□□□ 0.66
PRKCSH-217ENST00000592741 MINDY4BA8MYZ0 360 aa19.16■□□□□ 0.66
PRKCSH-217ENST00000592741 PIP4K2BP78356 416 aa19.16■□□□□ 0.66
PRKCSH-217ENST00000592741 PTPAQ15257 358 aa19.16■□□□□ 0.66
PRKCSH-217ENST00000592741 TBC1D9BQ66K14 1250 aa19.16■□□□□ 0.66
PRKCSH-217ENST00000592741 STK11IPQ8N1F8 1099 aa19.16■□□□□ 0.66
PRKCSH-217ENST00000592741 AOPEPQ8N6M6 819 aa19.16■□□□□ 0.66
PRKCSH-217ENST00000592741 SDR42E1Q8WUS8 393 aa19.16■□□□□ 0.66
PRKCSH-217ENST00000592741 TIGD1Q96MW7 591 aa19.16■□□□□ 0.66
PRKCSH-217ENST00000592741 MAP3K14Q99558 947 aa19.16■□□□□ 0.66
PRKCSH-217ENST00000592741 NRBP1Q9UHY1 535 aa19.16■□□□□ 0.66
PRKCSH-217ENST00000592741 CACNA1SQ13698 1873 aa19.16■□□□□ 0.66
PRKCSH-217ENST00000592741 ESR2Q92731 530 aa19.16■□□□□ 0.66
PRKCSH-217ENST00000592741 BPIFA3Q9BQP9 254 aa19.16■□□□□ 0.66
PRKCSH-217ENST00000592741 TAF1P21675 1872 aa19.16■□□□□ 0.66
PRKCSH-217ENST00000592741 DYNC1I1O14576 645 aa19.15■□□□□ 0.66
PRKCSH-217ENST00000592741 RRP9O43818 475 aaKnown RBP19.15■□□□□ 0.66
PRKCSH-217ENST00000592741 CELF1Q92879 486 aaKnown RBP19.15■□□□□ 0.66
PRKCSH-217ENST00000592741 FBXW7Q969H0 707 aa19.15■□□□□ 0.66
PRKCSH-217ENST00000592741 RIOK1Q9BRS2 568 aaKnown RBP19.15■□□□□ 0.66
PRKCSH-217ENST00000592741 SEMA3EO15041 775 aa19.15■□□□□ 0.66
PRKCSH-217ENST00000592741 DEXIO95424 95 aa19.15■□□□□ 0.66
PRKCSH-217ENST00000592741 SYKP43405 635 aa19.15■□□□□ 0.66
PRKCSH-217ENST00000592741 KCNQ4P56696 695 aa19.15■□□□□ 0.66
PRKCSH-217ENST00000592741 NLRP12P59046 1061 aa19.15■□□□□ 0.66
PRKCSH-217ENST00000592741 RBM6P78332 1123 aaKnown RBP19.15■□□□□ 0.66
PRKCSH-217ENST00000592741 VPS72Q15906 364 aa19.15■□□□□ 0.66
PRKCSH-217ENST00000592741 RC3H1Q5TC82 1133 aaKnown RBP19.15■□□□□ 0.66
PRKCSH-217ENST00000592741 ZNF654Q8IZM8 581 aa19.15■□□□□ 0.66
PRKCSH-217ENST00000592741 FAM84BQ96KN1 310 aaPredicted RBP19.15■□□□□ 0.66
PRKCSH-217ENST00000592741 TOM1O60784 492 aa19.14■□□□□ 0.65
PRKCSH-217ENST00000592741 CUTAO60888 179 aa19.14■□□□□ 0.65
PRKCSH-217ENST00000592741 MMP1P03956 469 aa19.14■□□□□ 0.65
PRKCSH-217ENST00000592741 NOSTRINQ8IVI9 506 aa19.14■□□□□ 0.65
PRKCSH-217ENST00000592741 BCL2L12Q9HB09 334 aa19.14■□□□□ 0.65
PRKCSH-217ENST00000592741 NARFQ9UHQ1 456 aa19.14■□□□□ 0.65
PRKCSH-217ENST00000592741 HPSEQ9Y251 543 aa19.14■□□□□ 0.65
PRKCSH-217ENST00000592741 UBE2Q2LH0YL09 131 aa19.13■□□□□ 0.65
PRKCSH-217ENST00000592741 DPCR1Q3MIW9 517 aa19.13■□□□□ 0.65
PRKCSH-217ENST00000592741 NBPF11Q86T75 865 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms