RNA–Protein interactions for RNA: ENST00000590723.5

NPC1-209, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 4

Gene NPC1, Length 755 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-209ENST00000590723 CEP162Q5TB80 1403 aa10.88□□□□□ -0.67
NPC1-209ENST00000590723 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.88□□□□□ -0.67
NPC1-209ENST00000590723 C12orf50Q8NA57 414 aaPredicted RBP10.88□□□□□ -0.67
NPC1-209ENST00000590723 SRCIN1Q9C0H9 1055 aa10.88□□□□□ -0.67
NPC1-209ENST00000590723 DIP2CQ9Y2E4 1556 aa10.87□□□□□ -0.67
NPC1-209ENST00000590723 SND1Q7KZF4 910 aaKnown RBP eCLIP10.87□□□□□ -0.674e-7■■■■□ 26.2
NPC1-209ENST00000590723 ARMC10Q8N2F6 343 aa10.87□□□□□ -0.67
NPC1-209ENST00000590723 BCO2Q9BYV7 579 aa10.87□□□□□ -0.67
NPC1-209ENST00000590723 ARHGEF12Q9NZN5 1544 aa10.87□□□□□ -0.67
NPC1-209ENST00000590723 SCAPERQ9BY12 1400 aa10.86□□□□□ -0.67
NPC1-209ENST00000590723 GIPC1O14908 333 aa10.86□□□□□ -0.67
NPC1-209ENST00000590723 FSTP19883 344 aa10.86□□□□□ -0.67
NPC1-209ENST00000590723 PREPP48147 710 aa10.86□□□□□ -0.67
NPC1-209ENST00000590723 FCGRTP55899 365 aa10.86□□□□□ -0.67
NPC1-209ENST00000590723 PPP2R3AQ06190 1150 aa10.86□□□□□ -0.67
NPC1-209ENST00000590723 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.86□□□□□ -0.67
NPC1-209ENST00000590723 GLIS3Q8NEA6 775 aa10.86□□□□□ -0.67
NPC1-209ENST00000590723 TIAM1Q13009 1591 aa10.86□□□□□ -0.67
NPC1-209ENST00000590723 BMP3P12645 472 aa10.85□□□□□ -0.67
NPC1-209ENST00000590723 MAOBP27338 520 aa10.85□□□□□ -0.67
NPC1-209ENST00000590723 CLEC10AQ8IUN9 316 aa10.85□□□□□ -0.67
NPC1-209ENST00000590723 FAM20CQ8IXL6 584 aa10.85□□□□□ -0.67
NPC1-209ENST00000590723 YIPF2Q9BWQ6 316 aa10.85□□□□□ -0.67
NPC1-209ENST00000590723 NRSN2Q9GZP1 204 aa10.85□□□□□ -0.67
NPC1-209ENST00000590723 KCNF1Q9H3M0 494 aa10.85□□□□□ -0.67
NPC1-209ENST00000590723 MAGI2Q86UL8 1455 aa10.85□□□□□ -0.67
NPC1-209ENST00000590723 EHBP1L1Q8N3D4 1523 aa10.84□□□□□ -0.67
NPC1-209ENST00000590723 SPG7Q9UQ90 795 aa10.84□□□□□ -0.67
NPC1-209ENST00000590723 PTPRMP28827 1452 aa10.84□□□□□ -0.67
NPC1-209ENST00000590723 ZNF518AQ6AHZ1 1483 aa10.83□□□□□ -0.68
NPC1-209ENST00000590723 SCO2A0A1W2PP80 73 aa10.83□□□□□ -0.68
NPC1-209ENST00000590723 PI16Q6UXB8 463 aa10.83□□□□□ -0.68
NPC1-209ENST00000590723 RAD18Q9NS91 495 aa10.83□□□□□ -0.68
NPC1-209ENST00000590723 GPN3Q9UHW5 284 aaPredicted RBP10.83□□□□□ -0.68
NPC1-209ENST00000590723 SYCP2Q9BX26 1530 aa10.83□□□□□ -0.68
NPC1-209ENST00000590723 GPATCH8Q9UKJ3 1502 aaKnown RBP10.83□□□□□ -0.68
NPC1-209ENST00000590723 REREQ9P2R6 1566 aa10.82□□□□□ -0.68
NPC1-209ENST00000590723 TIAF1O95411 115 aa10.82□□□□□ -0.68
NPC1-209ENST00000590723 IGLV1-40P01703 118 aa10.82□□□□□ -0.68
NPC1-209ENST00000590723 GSTT1P30711 240 aa10.82□□□□□ -0.68
NPC1-209ENST00000590723 USP11P51784 963 aa10.82□□□□□ -0.68
NPC1-209ENST00000590723 BEND4Q6ZU67 534 aa10.82□□□□□ -0.68
NPC1-209ENST00000590723 FAM83CQ9BQN1 747 aa10.82□□□□□ -0.68
NPC1-209ENST00000590723 TMEM39AQ9NV64 488 aa10.82□□□□□ -0.68
NPC1-209ENST00000590723 CDK11AQ9UQ88 783 aaPredicted RBP10.82□□□□□ -0.68
NPC1-209ENST00000590723 TRAPPC8Q9Y2L5 1435 aa10.82□□□□□ -0.68
NPC1-209ENST00000590723 INO80Q9ULG1 1556 aaPredicted RBP10.82□□□□□ -0.68
NPC1-209ENST00000590723 SUPT6HQ7KZ85 1726 aaKnown RBP10.81□□□□□ -0.68
NPC1-209ENST00000590723 SOX4Q06945 474 aaPredicted RBP10.81□□□□□ -0.68
NPC1-209ENST00000590723 PDE3AQ14432 1141 aa10.81□□□□□ -0.68
NPC1-209ENST00000590723 COL19A1Q14993 1142 aa10.81□□□□□ -0.68
NPC1-209ENST00000590723 NXPE4Q6UWF7 544 aa10.81□□□□□ -0.68
NPC1-209ENST00000590723 FRMD6Q96NE9 622 aa10.81□□□□□ -0.68
NPC1-209ENST00000590723 TRIM56Q9BRZ2 755 aaKnown RBP10.81□□□□□ -0.68
NPC1-209ENST00000590723 RNF112Q9ULX5 631 aa10.81□□□□□ -0.68
NPC1-209ENST00000590723 AKAP2Q9Y2D5 859 aa10.81□□□□□ -0.68
NPC1-209ENST00000590723 LOC100996750A0A140TA64 210 aa10.8□□□□□ -0.68
NPC1-209ENST00000590723 DLGAP3O95886 979 aa10.8□□□□□ -0.68
NPC1-209ENST00000590723 RXRBP28702 533 aa10.8□□□□□ -0.68
NPC1-209ENST00000590723 GIMAP7Q8NHV1 300 aa10.8□□□□□ -0.68
NPC1-209ENST00000590723 KRTAP4-6Q9BYQ5 205 aa10.8□□□□□ -0.68
NPC1-209ENST00000590723 C7orf69Q9H7B7 122 aa10.8□□□□□ -0.68
NPC1-209ENST00000590723 C9orf84Q5VXU9 1444 aa10.8□□□□□ -0.68
NPC1-209ENST00000590723 ADGBQ8N7X0 1667 aa10.79□□□□□ -0.68
NPC1-209ENST00000590723 MAP4P27816 1152 aaKnown RBP10.79□□□□□ -0.68
NPC1-209ENST00000590723 NFIAQ12857 509 aa10.79□□□□□ -0.68
NPC1-209ENST00000590723 EFCAB2Q5VUJ9 269 aa10.79□□□□□ -0.68
NPC1-209ENST00000590723 RNF43Q68DV7 783 aa10.79□□□□□ -0.68
NPC1-209ENST00000590723 TRIM42Q8IWZ5 723 aa10.79□□□□□ -0.68
NPC1-209ENST00000590723 DBNDD2Q9BQY9 259 aa10.79□□□□□ -0.68
NPC1-209ENST00000590723 PPM1HQ9ULR3 514 aa10.79□□□□□ -0.68
NPC1-209ENST00000590723 ATP10AO60312 1499 aa10.79□□□□□ -0.68
NPC1-209ENST00000590723 SYNGAP1Q96PV0 1343 aa10.79□□□□□ -0.68
NPC1-209ENST00000590723 C3P01024 1663 aa10.79□□□□□ -0.68
NPC1-209ENST00000590723 LOC105371045A0A1W2PR82 267 aa10.78□□□□□ -0.68
NPC1-209ENST00000590723 LDHBP07195 334 aaKnown RBP10.78□□□□□ -0.68
NPC1-209ENST00000590723 ADH5P11766 374 aa10.78□□□□□ -0.68
NPC1-209ENST00000590723 Q8N3U1 123 aa10.78□□□□□ -0.68
NPC1-209ENST00000590723 CEP44Q9C0F1 390 aa10.78□□□□□ -0.68
NPC1-209ENST00000590723 MLH3Q9UHC1 1453 aa10.78□□□□□ -0.68
NPC1-209ENST00000590723 P4HBP07237 508 aaKnown RBP10.77□□□□□ -0.69
NPC1-209ENST00000590723 ZNF157P51786 506 aaPredicted RBP10.77□□□□□ -0.69
NPC1-209ENST00000590723 FAAP100Q0VG06 881 aa10.77□□□□□ -0.69
NPC1-209ENST00000590723 AKAP4Q5JQC9 854 aa10.77□□□□□ -0.69
NPC1-209ENST00000590723 EMILIN2Q9BXX0 1053 aa10.77□□□□□ -0.69
NPC1-209ENST00000590723 SAMM50Q9Y512 469 aa10.77□□□□□ -0.69
NPC1-209ENST00000590723 PLXNC1O60486 1568 aa10.77□□□□□ -0.69
NPC1-209ENST00000590723 VPS8Q8N3P4 1428 aa10.76□□□□□ -0.69
NPC1-209ENST00000590723 ATP7AQ04656 1500 aa10.76□□□□□ -0.69
NPC1-209ENST00000590723 HMX2A2RU54 273 aa10.76□□□□□ -0.69
NPC1-209ENST00000590723 SLFN14P0C7P3 912 aa10.76□□□□□ -0.69
NPC1-209ENST00000590723 DRD2P14416 443 aa10.76□□□□□ -0.69
NPC1-209ENST00000590723 LRP8Q14114 963 aa10.76□□□□□ -0.69
NPC1-209ENST00000590723 PAOXQ6QHF9 649 aa10.76□□□□□ -0.69
NPC1-209ENST00000590723 AFAP1Q8N556 730 aa10.76□□□□□ -0.69
NPC1-209ENST00000590723 C2CD4AQ8NCU7 369 aaPredicted RBP10.76□□□□□ -0.69
NPC1-209ENST00000590723 KRT82Q9NSB4 513 aa10.76□□□□□ -0.69
NPC1-209ENST00000590723 PREX1Q8TCU6 1659 aa10.76□□□□□ -0.69
NPC1-209ENST00000590723 LMTK3Q96Q04 1460 aa10.75□□□□□ -0.69
NPC1-209ENST00000590723 FAM95CA0A1B0GW59 222 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms