RNA–Protein interactions for RNA: ENST00000590180.1

TPM4-212, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-212ENST00000590180 DDX4Q9NQI0 724 aaKnown RBP14.73□□□□□ -0.05
TPM4-212ENST00000590180 AATFQ9NY61 560 aaKnown RBP eCLIP14.73□□□□□ -0.05
TPM4-212ENST00000590180 DDTLA6NHG4 134 aaPredicted RBP14.72□□□□□ -0.05
TPM4-212ENST00000590180 SMARCA5O60264 1052 aaPredicted RBP14.72□□□□□ -0.05
TPM4-212ENST00000590180 ALDH1A1P00352 501 aa14.72□□□□□ -0.05
TPM4-212ENST00000590180 INPP5BP32019 993 aa14.72□□□□□ -0.05
TPM4-212ENST00000590180 MAP3K12Q12852 859 aa14.72□□□□□ -0.05
TPM4-212ENST00000590180 SH3BP5LQ7L8J4 393 aa14.72□□□□□ -0.05
TPM4-212ENST00000590180 IFNL1Q8IU54 200 aa14.72□□□□□ -0.05
TPM4-212ENST00000590180 SH3RF3Q8TEJ3 882 aaPredicted RBP14.72□□□□□ -0.05
TPM4-212ENST00000590180 LRRCC1Q9C099 1032 aa14.72□□□□□ -0.05
TPM4-212ENST00000590180 ANTXR1Q9H6X2 564 aa14.72□□□□□ -0.05
TPM4-212ENST00000590180 CASP8AP2Q9UKL3 1982 aa14.72□□□□□ -0.05
TPM4-212ENST00000590180 RPAP1Q9BWH6 1393 aaPredicted RBP14.72□□□□□ -0.05
TPM4-212ENST00000590180 AKAP11Q9UKA4 1901 aa14.71□□□□□ -0.05
TPM4-212ENST00000590180 IGSF3O75054 1194 aa14.71□□□□□ -0.05
TPM4-212ENST00000590180 PLCG2P16885 1265 aa14.71□□□□□ -0.05
TPM4-212ENST00000590180 GTF2A2P52657 109 aa14.71□□□□□ -0.05
TPM4-212ENST00000590180 PPP4CP60510 307 aa14.71□□□□□ -0.05
TPM4-212ENST00000590180 ERO1BQ86YB8 467 aa14.71□□□□□ -0.05
TPM4-212ENST00000590180 MAGEB6Q8N7X4 407 aa14.71□□□□□ -0.05
TPM4-212ENST00000590180 CRBNQ96SW2 442 aa14.71□□□□□ -0.05
TPM4-212ENST00000590180 DNAJC2Q99543 621 aaKnown RBP14.71□□□□□ -0.05
TPM4-212ENST00000590180 ZNF112Q9UJU3 913 aa14.71□□□□□ -0.05
TPM4-212ENST00000590180 SNCAIPQ9Y6H5 919 aa14.71□□□□□ -0.05
TPM4-212ENST00000590180 SPDYE5A6NIY4 337 aa14.7□□□□□ -0.06
TPM4-212ENST00000590180 IGF2BP3O00425 579 aaKnown RBP eCLIP14.7□□□□□ -0.06
TPM4-212ENST00000590180 NPM3O75607 178 aaKnown RBP14.7□□□□□ -0.06
TPM4-212ENST00000590180 TTF1Q15361 905 aaPredicted RBP14.7□□□□□ -0.06
TPM4-212ENST00000590180 ADGRA1Q86SQ6 560 aa14.7□□□□□ -0.06
TPM4-212ENST00000590180 TGFBRAP1Q8WUH2 860 aa14.7□□□□□ -0.06
TPM4-212ENST00000590180 BOLA2Q9H3K6 86 aa14.7□□□□□ -0.06
TPM4-212ENST00000590180 DCTPP1Q9H773 170 aa14.7□□□□□ -0.06
TPM4-212ENST00000590180 PCDHB15Q9Y5E8 787 aa14.7□□□□□ -0.06
TPM4-212ENST00000590180 CCL15-CCL14A0A0B4J2E2 113 aa14.69□□□□□ -0.06
TPM4-212ENST00000590180 GPR25O00155 361 aa14.69□□□□□ -0.06
TPM4-212ENST00000590180 GOLIM4O00461 696 aa14.69□□□□□ -0.06
TPM4-212ENST00000590180 SLURP2P0DP57 97 aa14.69□□□□□ -0.06
TPM4-212ENST00000590180 DYNLL1P63167 89 aaKnown RBP14.69□□□□□ -0.06
TPM4-212ENST00000590180 DGKZQ13574 1117 aa14.69□□□□□ -0.06
TPM4-212ENST00000590180 CCL15Q16663 113 aa14.69□□□□□ -0.06
TPM4-212ENST00000590180 MAPKAPK5Q8IW41 473 aa14.69□□□□□ -0.06
TPM4-212ENST00000590180 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.69□□□□□ -0.06
TPM4-212ENST00000590180 MS4A4AQ96JQ5 239 aa14.69□□□□□ -0.06
TPM4-212ENST00000590180 PTPN18Q99952 460 aa14.69□□□□□ -0.06
TPM4-212ENST00000590180 R3HDMLQ9H3Y0 253 aa14.69□□□□□ -0.06
TPM4-212ENST00000590180 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.69□□□□□ -0.06
TPM4-212ENST00000590180 TESPA1A2RU30 521 aaPredicted RBP14.68□□□□□ -0.06
TPM4-212ENST00000590180 IRF6O14896 467 aa14.68□□□□□ -0.06
TPM4-212ENST00000590180 PPATQ06203 517 aa14.68□□□□□ -0.06
TPM4-212ENST00000590180 PPIL2Q13356 520 aa14.68□□□□□ -0.06
TPM4-212ENST00000590180 MIGA1Q8NAN2 632 aa14.68□□□□□ -0.06
TPM4-212ENST00000590180 ZNF296Q8WUU4 475 aaPredicted RBP14.68□□□□□ -0.06
TPM4-212ENST00000590180 BRI3BPQ8WY22 251 aa14.68□□□□□ -0.06
TPM4-212ENST00000590180 OSBPL5Q9H0X9 879 aaPredicted RBP14.68□□□□□ -0.06
TPM4-212ENST00000590180 PICK1Q9NRD5 415 aa14.68□□□□□ -0.06
TPM4-212ENST00000590180 PHF20L1A8MW92 1017 aa14.67□□□□□ -0.06
TPM4-212ENST00000590180 CETPP11597 493 aa14.67□□□□□ -0.06
TPM4-212ENST00000590180 ATP5JP18859 108 aa14.67□□□□□ -0.06
TPM4-212ENST00000590180 USP5P45974 858 aa14.67□□□□□ -0.06
TPM4-212ENST00000590180 SNAPC2Q13487 334 aa14.67□□□□□ -0.06
TPM4-212ENST00000590180 SLC9C2Q5TAH2 1124 aa14.67□□□□□ -0.06
TPM4-212ENST00000590180 EDC3Q96F86 508 aaKnown RBP14.67□□□□□ -0.06
TPM4-212ENST00000590180 ABHD8Q96I13 439 aa14.67□□□□□ -0.06
TPM4-212ENST00000590180 MCOLN1Q9GZU1 580 aa14.67□□□□□ -0.06
TPM4-212ENST00000590180 RFX7Q2KHR2 1363 aa14.66□□□□□ -0.06
TPM4-212ENST00000590180 FAM196BA6NMK8 535 aa14.66□□□□□ -0.06
TPM4-212ENST00000590180 TBC1D12O60347 775 aa14.66□□□□□ -0.06
TPM4-212ENST00000590180 CTNND1O60716 968 aaKnown RBP14.66□□□□□ -0.06
TPM4-212ENST00000590180 FKTNO75072 461 aa14.66□□□□□ -0.06
TPM4-212ENST00000590180 MAP3K10Q02779 954 aa14.66□□□□□ -0.06
TPM4-212ENST00000590180 NOL9Q5SY16 702 aaKnown RBP14.66□□□□□ -0.06
TPM4-212ENST00000590180 SCYL3Q8IZE3 742 aa14.66□□□□□ -0.06
TPM4-212ENST00000590180 DHX36Q9H2U1 1008 aaKnown RBP14.66□□□□□ -0.06
TPM4-212ENST00000590180 PAG1Q9NWQ8 432 aa14.66□□□□□ -0.06
TPM4-212ENST00000590180 PI4KBQ9UBF8 816 aa14.66□□□□□ -0.06
TPM4-212ENST00000590180 SAP30BPQ9UHR5 308 aaKnown RBP14.66□□□□□ -0.06
TPM4-212ENST00000590180 ZHX2Q9Y6X8 837 aa14.66□□□□□ -0.06
TPM4-212ENST00000590180 MAGEB6P1A0A0J9YX57 407 aa14.65□□□□□ -0.06
TPM4-212ENST00000590180 PDE6AP16499 860 aa14.65□□□□□ -0.06
TPM4-212ENST00000590180 CRHR2Q13324 411 aa14.65□□□□□ -0.06
TPM4-212ENST00000590180 TAF1CQ15572 869 aaPredicted RBP14.65□□□□□ -0.06
TPM4-212ENST00000590180 TMED8Q6PL24 325 aaPredicted RBP14.65□□□□□ -0.06
TPM4-212ENST00000590180 CTU1Q7Z7A3 348 aaKnown RBP14.65□□□□□ -0.06
TPM4-212ENST00000590180 CERS3Q8IU89 383 aa14.65□□□□□ -0.06
TPM4-212ENST00000590180 FOXP4Q8IVH2 680 aaPredicted RBP14.65□□□□□ -0.06
TPM4-212ENST00000590180 HAUS7Q99871 368 aa14.65□□□□□ -0.06
TPM4-212ENST00000590180 CFHR5Q9BXR6 569 aa14.65□□□□□ -0.06
TPM4-212ENST00000590180 TRIM34Q9BYJ4 488 aa14.65□□□□□ -0.06
TPM4-212ENST00000590180 ZFYVE28Q9HCC9 887 aa14.65□□□□□ -0.06
TPM4-212ENST00000590180 ECHDC1Q9NTX5 307 aa14.65□□□□□ -0.06
TPM4-212ENST00000590180 ZBTB47Q9UFB7 747 aaPredicted RBP14.65□□□□□ -0.06
TPM4-212ENST00000590180 PALD1Q9ULE6 856 aa14.65□□□□□ -0.06
TPM4-212ENST00000590180 CCDC85CA6NKD9 419 aa14.64□□□□□ -0.07
TPM4-212ENST00000590180 PTPRAP18433 802 aa14.64□□□□□ -0.07
TPM4-212ENST00000590180 NOM1Q5C9Z4 860 aaKnown RBP14.64□□□□□ -0.07
TPM4-212ENST00000590180 FAM43AQ8N2R8 423 aa14.64□□□□□ -0.07
TPM4-212ENST00000590180 CRACR2BQ8N4Y2 399 aaPredicted RBP14.64□□□□□ -0.07
TPM4-212ENST00000590180 GPATCH3Q96I76 525 aa14.64□□□□□ -0.07
TPM4-212ENST00000590180 FLT1P17948 1338 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms