RNA–Protein interactions for RNA: ENST00000589419.1

CCBE1-204, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 4

Gene CCBE1, Length 587 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-204ENST00000589419 CNNM2Q9H8M5 875 aa16.41■□□□□ 0.22
CCBE1-204ENST00000589419 FZD9O00144 591 aa16.4■□□□□ 0.22
CCBE1-204ENST00000589419 SOCS7O14512 581 aa16.4■□□□□ 0.22
CCBE1-204ENST00000589419 LMNB1P20700 586 aa16.4■□□□□ 0.22
CCBE1-204ENST00000589419 EIF6P56537 245 aaKnown RBP16.4■□□□□ 0.22
CCBE1-204ENST00000589419 AKNAD1Q5T1N1 836 aa16.4■□□□□ 0.22
CCBE1-204ENST00000589419 APOBEC3HQ6NTF7 200 aaKnown RBP16.4■□□□□ 0.22
CCBE1-204ENST00000589419 CTR9Q6PD62 1173 aa16.4■□□□□ 0.22
CCBE1-204ENST00000589419 MB21D2Q8IYB1 491 aaPredicted RBP16.4■□□□□ 0.22
CCBE1-204ENST00000589419 FBXL16Q8N461 479 aa16.4■□□□□ 0.22
CCBE1-204ENST00000589419 FLT1P17948 1338 aa16.4■□□□□ 0.22
CCBE1-204ENST00000589419 NPM3O75607 178 aaKnown RBP16.39■□□□□ 0.21
CCBE1-204ENST00000589419 SLC3A2P08195 630 aaKnown RBP16.39■□□□□ 0.21
CCBE1-204ENST00000589419 PRELPP51888 382 aa16.39■□□□□ 0.21
CCBE1-204ENST00000589419 AK2P54819 239 aa16.39■□□□□ 0.21
CCBE1-204ENST00000589419 ARHGAP27Q6ZUM4 889 aa16.39■□□□□ 0.21
CCBE1-204ENST00000589419 MTMR14Q8NCE2 650 aa16.39■□□□□ 0.21
CCBE1-204ENST00000589419 KRT23Q9C075 422 aa16.39■□□□□ 0.21
CCBE1-204ENST00000589419 COL2A1P02458 1487 aaPredicted RBP16.39■□□□□ 0.21
CCBE1-204ENST00000589419 USP17L12C9JPN9 530 aa16.38■□□□□ 0.21
CCBE1-204ENST00000589419 USP17L21D6R901 530 aa16.38■□□□□ 0.21
CCBE1-204ENST00000589419 FGRP09769 529 aa16.38■□□□□ 0.21
CCBE1-204ENST00000589419 MCM5P33992 734 aa16.38■□□□□ 0.21
CCBE1-204ENST00000589419 EXOSC10Q01780 885 aaKnown RBP16.38■□□□□ 0.21
CCBE1-204ENST00000589419 MFSD6Q6ZSS7 791 aa16.38■□□□□ 0.21
CCBE1-204ENST00000589419 OGFOD1Q8N543 542 aa16.38■□□□□ 0.21
CCBE1-204ENST00000589419 TGFBRAP1Q8WUH2 860 aa16.38■□□□□ 0.21
CCBE1-204ENST00000589419 MTA3Q9BTC8 594 aa16.38■□□□□ 0.21
CCBE1-204ENST00000589419 AGXT2Q9BYV1 514 aa16.38■□□□□ 0.21
CCBE1-204ENST00000589419 MCM9Q9NXL9 1143 aa16.38■□□□□ 0.21
CCBE1-204ENST00000589419 MINDY4BA8MYZ0 360 aa16.37■□□□□ 0.21
CCBE1-204ENST00000589419 WDHD1O75717 1129 aaPredicted RBP16.37■□□□□ 0.21
CCBE1-204ENST00000589419 USP17L8P0C7I0 530 aa16.37■□□□□ 0.21
CCBE1-204ENST00000589419 CPA1P15085 419 aa16.37■□□□□ 0.21
CCBE1-204ENST00000589419 CFAP100Q494V2 611 aa16.37■□□□□ 0.21
CCBE1-204ENST00000589419 C12orf60Q5U649 245 aa16.37■□□□□ 0.21
CCBE1-204ENST00000589419 CDC42EP5Q6NZY7 148 aa16.37■□□□□ 0.21
CCBE1-204ENST00000589419 MAPKAPK5Q8IW41 473 aa16.37■□□□□ 0.21
CCBE1-204ENST00000589419 ZSCAN31Q96LW9 406 aaPredicted RBP16.37■□□□□ 0.21
CCBE1-204ENST00000589419 IDI2Q9BXS1 227 aa16.37■□□□□ 0.21
CCBE1-204ENST00000589419 USP40Q9NVE5 1235 aa16.37■□□□□ 0.21
CCBE1-204ENST00000589419 TAOK2Q9UL54 1235 aa16.37■□□□□ 0.21
CCBE1-204ENST00000589419 LIMCH1Q9UPQ0 1083 aa16.37■□□□□ 0.21
CCBE1-204ENST00000589419 NEDD4P46934 1319 aa16.37■□□□□ 0.21
CCBE1-204ENST00000589419 ORC4O43929 436 aa16.36■□□□□ 0.21
CCBE1-204ENST00000589419 RBM5P52756 815 aaKnown RBP eCLIP16.36■□□□□ 0.21
CCBE1-204ENST00000589419 CTDSPL2Q05D32 466 aa16.36■□□□□ 0.21
CCBE1-204ENST00000589419 DPF2Q92785 391 aa16.36■□□□□ 0.21
CCBE1-204ENST00000589419 TMX3Q96JJ7 454 aa16.36■□□□□ 0.21
CCBE1-204ENST00000589419 SH2B1Q9NRF2 756 aaPredicted RBP16.36■□□□□ 0.21
CCBE1-204ENST00000589419 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.36■□□□□ 0.21
CCBE1-204ENST00000589419 SPDYE2BA6NHP3 402 aa16.35■□□□□ 0.21
CCBE1-204ENST00000589419 SPDYE6P0CI01 402 aa16.35■□□□□ 0.21
CCBE1-204ENST00000589419 YBX3P16989 372 aaKnown RBP eCLIP16.35■□□□□ 0.21
CCBE1-204ENST00000589419 ZNF280AP59817 542 aaPredicted RBP16.35■□□□□ 0.21
CCBE1-204ENST00000589419 PDE4BQ07343 736 aa16.35■□□□□ 0.21
CCBE1-204ENST00000589419 TOB2Q14106 344 aaPredicted RBP16.35■□□□□ 0.21
CCBE1-204ENST00000589419 ZBTB12Q9Y330 459 aaPredicted RBP16.35■□□□□ 0.21
CCBE1-204ENST00000589419 B4E1Z4 1266 aa16.34■□□□□ 0.21
CCBE1-204ENST00000589419 PRC1O43663 620 aa16.34■□□□□ 0.21
CCBE1-204ENST00000589419 SLC4A3P48751 1232 aa16.34■□□□□ 0.21
CCBE1-204ENST00000589419 ANTXR2P58335 489 aa16.34■□□□□ 0.21
CCBE1-204ENST00000589419 CUL4AQ13619 759 aa16.34■□□□□ 0.21
CCBE1-204ENST00000589419 COL9A3Q14050 684 aaPredicted RBP16.34■□□□□ 0.21
CCBE1-204ENST00000589419 DLGAP5Q15398 846 aa16.34■□□□□ 0.21
CCBE1-204ENST00000589419 Q6ZUG5 572 aa16.34■□□□□ 0.21
CCBE1-204ENST00000589419 ESR2Q92731 530 aa16.34■□□□□ 0.21
CCBE1-204ENST00000589419 ZBED3Q96IU2 234 aaPredicted RBP16.34■□□□□ 0.21
CCBE1-204ENST00000589419 TMEM87BQ96K49 555 aa16.34■□□□□ 0.21
CCBE1-204ENST00000589419 OSBPL5Q9H0X9 879 aaPredicted RBP16.34■□□□□ 0.21
CCBE1-204ENST00000589419 ZNF287Q9HBT7 754 aa16.34■□□□□ 0.21
CCBE1-204ENST00000589419 TMOD2Q9NZR1 351 aa16.34■□□□□ 0.21
CCBE1-204ENST00000589419 MYH8P13535 1937 aa16.33■□□□□ 0.21
CCBE1-204ENST00000589419 CYP2D7A0A087X1C5 515 aa16.33■□□□□ 0.2
CCBE1-204ENST00000589419 ENTPD3O75355 529 aa16.33■□□□□ 0.2
CCBE1-204ENST00000589419 POLR3DP05423 398 aaPredicted RBP16.33■□□□□ 0.2
CCBE1-204ENST00000589419 CYP2D6P10635 497 aa16.33■□□□□ 0.2
CCBE1-204ENST00000589419 FGD1P98174 961 aa16.33■□□□□ 0.2
CCBE1-204ENST00000589419 FKBP1CQ5VVH2 108 aa16.33■□□□□ 0.2
CCBE1-204ENST00000589419 TTC6Q86TZ1 520 aa16.33■□□□□ 0.2
CCBE1-204ENST00000589419 INTS4Q96HW7 963 aaKnown RBP16.33■□□□□ 0.2
CCBE1-204ENST00000589419 TCEANC2Q96MN5 208 aa16.33■□□□□ 0.2
CCBE1-204ENST00000589419 TACC3Q9Y6A5 838 aa16.33■□□□□ 0.2
CCBE1-204ENST00000589419 ZNF541Q9H0D2 1346 aa16.33■□□□□ 0.2
CCBE1-204ENST00000589419 ZC3H4Q9UPT8 1303 aaKnown RBP16.33■□□□□ 0.2
CCBE1-204ENST00000589419 ATRNL1Q5VV63 1379 aa16.33■□□□□ 0.2
CCBE1-204ENST00000589419 SIPA1L1O43166 1804 aa16.32■□□□□ 0.2
CCBE1-204ENST00000589419 KDM4AO75164 1064 aa16.32■□□□□ 0.2
CCBE1-204ENST00000589419 HSP90AA1P07900 732 aaKnown RBP16.32■□□□□ 0.2
CCBE1-204ENST00000589419 EVCP57679 992 aa16.32■□□□□ 0.2
CCBE1-204ENST00000589419 PICALMQ13492 652 aa16.32■□□□□ 0.2
CCBE1-204ENST00000589419 SART3Q15020 963 aaKnown RBP16.32■□□□□ 0.2
CCBE1-204ENST00000589419 SPDYE2Q495Y8 402 aa16.32■□□□□ 0.2
CCBE1-204ENST00000589419 C16orf86Q6ZW13 317 aa16.32■□□□□ 0.2
CCBE1-204ENST00000589419 GPC2Q8N158 579 aa16.32■□□□□ 0.2
CCBE1-204ENST00000589419 EHD4Q9H223 541 aa16.32■□□□□ 0.2
CCBE1-204ENST00000589419 DHX36Q9H2U1 1008 aaKnown RBP16.32■□□□□ 0.2
CCBE1-204ENST00000589419 DDX4Q9NQI0 724 aaKnown RBP16.32■□□□□ 0.2
CCBE1-204ENST00000589419 SH2B2O14492 632 aaPredicted RBP16.31■□□□□ 0.2
CCBE1-204ENST00000589419 MYO1BO43795 1136 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms