RNA–Protein interactions for RNA: ENST00000589228.5

PRKAR1A-217, Transcript of protein kinase cAMP-dependent type I regulatory subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKAR1A, Length 4,256 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAR1A-217ENST00000589228 CTR9Q6PD62 1173 aa13.68□□□□□ -0.22
PRKAR1A-217ENST00000589228 GJB4Q9NTQ9 266 aa13.68□□□□□ -0.22
PRKAR1A-217ENST00000589228 MAST3O60307 1309 aa13.68□□□□□ -0.22
PRKAR1A-217ENST00000589228 FAM47AQ5JRC9 791 aa13.68□□□□□ -0.22
PRKAR1A-217ENST00000589228 FAM114A1Q8IWE2 563 aa13.68□□□□□ -0.22
PRKAR1A-217ENST00000589228 ZNF622Q969S3 477 aaKnown RBP eCLIP13.68□□□□□ -0.22
PRKAR1A-217ENST00000589228 ERO1AQ96HE7 468 aa13.68□□□□□ -0.22
PRKAR1A-217ENST00000589228 SPAG5Q96R06 1193 aa13.68□□□□□ -0.22
PRKAR1A-217ENST00000589228 CCDC113Q9H0I3 377 aa13.68□□□□□ -0.22
PRKAR1A-217ENST00000589228 SERTAD1Q9UHV2 236 aa13.68□□□□□ -0.22
PRKAR1A-217ENST00000589228 CTNND2Q9UQB3 1225 aa13.68□□□□□ -0.22
PRKAR1A-217ENST00000589228 AXIN2Q9Y2T1 843 aa13.68□□□□□ -0.22
PRKAR1A-217ENST00000589228 LUC7L2Q9Y383 392 aaKnown RBP13.68□□□□□ -0.22
PRKAR1A-217ENST00000589228 LDHBP07195 334 aaKnown RBP13.67□□□□□ -0.22
PRKAR1A-217ENST00000589228 IBSPP21815 317 aaPredicted RBP13.67□□□□□ -0.22
PRKAR1A-217ENST00000589228 ADKP55263 362 aaKnown RBP13.67□□□□□ -0.22
PRKAR1A-217ENST00000589228 EIF6P56537 245 aaKnown RBP13.67□□□□□ -0.22
PRKAR1A-217ENST00000589228 OSBP2Q969R2 916 aa13.67□□□□□ -0.22
PRKAR1A-217ENST00000589228 ALS2CR12Q96Q35 445 aa13.67□□□□□ -0.22
PRKAR1A-217ENST00000589228 CALCOCO1Q9P1Z2 691 aa13.67□□□□□ -0.22
PRKAR1A-217ENST00000589228 SHROOM2Q13796 1616 aa13.67□□□□□ -0.22
PRKAR1A-217ENST00000589228 ERBB3P21860 1342 aa13.67□□□□□ -0.22
PRKAR1A-217ENST00000589228 VPS36Q86VN1 386 aa13.67□□□□□ -0.22
PRKAR1A-217ENST00000589228 CCDC42Q96M95 316 aa13.67□□□□□ -0.22
PRKAR1A-217ENST00000589228 PRM3Q9NNZ6 103 aa13.67□□□□□ -0.22
PRKAR1A-217ENST00000589228 CPSF1Q10570 1443 aaKnown RBP13.67□□□□□ -0.22
PRKAR1A-217ENST00000589228 RIMBP2O15034 1052 aa13.67□□□□□ -0.22
PRKAR1A-217ENST00000589228 ZMYM1Q5SVZ6 1142 aa13.67□□□□□ -0.22
PRKAR1A-217ENST00000589228 GOLGA1Q92805 767 aa13.67□□□□□ -0.22
PRKAR1A-217ENST00000589228 SRRTQ9BXP5 876 aaKnown RBP13.67□□□□□ -0.22
PRKAR1A-217ENST00000589228 FAM107BQ9H098 131 aa13.67□□□□□ -0.22
PRKAR1A-217ENST00000589228 ZNF215Q9UL58 517 aaPredicted RBP13.67□□□□□ -0.22
PRKAR1A-217ENST00000589228 GNPATO15228 680 aa13.67□□□□□ -0.22
PRKAR1A-217ENST00000589228 GYG1P46976 350 aa13.67□□□□□ -0.22
PRKAR1A-217ENST00000589228 CTSWP56202 376 aa13.67□□□□□ -0.22
PRKAR1A-217ENST00000589228 POSTNQ15063 836 aa13.67□□□□□ -0.22
PRKAR1A-217ENST00000589228 C11orf57Q6ZUT1 292 aaPredicted RBP13.67□□□□□ -0.22
PRKAR1A-217ENST00000589228 BLZF1Q9H2G9 400 aa13.67□□□□□ -0.22
PRKAR1A-217ENST00000589228 WWC3Q9ULE0 1092 aa13.67□□□□□ -0.22
PRKAR1A-217ENST00000589228 LRRC7Q96NW7 1537 aa13.66□□□□□ -0.22
PRKAR1A-217ENST00000589228 CACTINQ8WUQ7 758 aaKnown RBP13.66□□□□□ -0.22
PRKAR1A-217ENST00000589228 EEF2KMTQ96G04 330 aa13.66□□□□□ -0.22
PRKAR1A-217ENST00000589228 AIFM3Q96NN9 605 aa13.66□□□□□ -0.22
PRKAR1A-217ENST00000589228 SLAIN2Q9P270 581 aa13.66□□□□□ -0.22
PRKAR1A-217ENST00000589228 ERVV-2B6SEH9 535 aa13.66□□□□□ -0.22
PRKAR1A-217ENST00000589228 USP17L12C9JPN9 530 aa13.66□□□□□ -0.22
PRKAR1A-217ENST00000589228 USP17L21D6R901 530 aa13.66□□□□□ -0.22
PRKAR1A-217ENST00000589228 TERF1P54274 439 aa13.66□□□□□ -0.22
PRKAR1A-217ENST00000589228 IFNL3Q8IZI9 196 aa13.66□□□□□ -0.22
PRKAR1A-217ENST00000589228 C6orf50Q9HD87 102 aa13.66□□□□□ -0.22
PRKAR1A-217ENST00000589228 GLI2P10070 1586 aa13.66□□□□□ -0.22
PRKAR1A-217ENST00000589228 ABCA6Q8N139 1617 aa13.66□□□□□ -0.22
PRKAR1A-217ENST00000589228 NEFHP12036 1026 aa13.66□□□□□ -0.22
PRKAR1A-217ENST00000589228 HIBADHP31937 336 aaKnown RBP13.66□□□□□ -0.22
PRKAR1A-217ENST00000589228 GSTO1P78417 241 aa13.66□□□□□ -0.22
PRKAR1A-217ENST00000589228 TTC38Q5R3I4 469 aa13.66□□□□□ -0.22
PRKAR1A-217ENST00000589228 ZNF654Q8IZM8 581 aa13.66□□□□□ -0.22
PRKAR1A-217ENST00000589228 MACROD2A1Z1Q3 448 aa13.65□□□□□ -0.22
PRKAR1A-217ENST00000589228 POTEB2H3BUK9 544 aa13.65□□□□□ -0.22
PRKAR1A-217ENST00000589228 HLA-DOAP06340 250 aa13.65□□□□□ -0.22
PRKAR1A-217ENST00000589228 PPP2R3AQ06190 1150 aa13.65□□□□□ -0.22
PRKAR1A-217ENST00000589228 KIF5AQ12840 1032 aa13.65□□□□□ -0.22
PRKAR1A-217ENST00000589228 DPCR1Q3MIW9 517 aa13.65□□□□□ -0.22
PRKAR1A-217ENST00000589228 DESI2Q9BSY9 194 aa13.65□□□□□ -0.22
PRKAR1A-217ENST00000589228 FANCLQ9NW38 375 aa13.65□□□□□ -0.22
PRKAR1A-217ENST00000589228 TAB2Q9NYJ8 693 aa13.65□□□□□ -0.22
PRKAR1A-217ENST00000589228 NLRP1Q9C000 1473 aa13.65□□□□□ -0.22
PRKAR1A-217ENST00000589228 HECW2Q9P2P5 1572 aa13.65□□□□□ -0.22
PRKAR1A-217ENST00000589228 E9PCH4 1651 aa13.65□□□□□ -0.22
PRKAR1A-217ENST00000589228 KIF20AO95235 890 aa13.65□□□□□ -0.22
PRKAR1A-217ENST00000589228 CUL5Q93034 780 aa13.65□□□□□ -0.22
PRKAR1A-217ENST00000589228 RTCBQ9Y3I0 505 aaKnown RBP13.65□□□□□ -0.22
PRKAR1A-217ENST00000589228 M0R2C6 588 aa13.65□□□□□ -0.22
PRKAR1A-217ENST00000589228 ERCC6LQ2NKX8 1250 aa13.65□□□□□ -0.22
PRKAR1A-217ENST00000589228 ZBTB38Q8NAP3 1195 aaPredicted RBP13.65□□□□□ -0.22
PRKAR1A-217ENST00000589228 MLKLQ8NB16 471 aa13.65□□□□□ -0.22
PRKAR1A-217ENST00000589228 GOPCQ9HD26 462 aa13.65□□□□□ -0.22
PRKAR1A-217ENST00000589228 OGFRQ9NZT2 677 aa13.65□□□□□ -0.22
PRKAR1A-217ENST00000589228 DENND2AQ9ULE3 1009 aa13.65□□□□□ -0.22
PRKAR1A-217ENST00000589228 SNAP23O00161 211 aa13.64□□□□□ -0.23
PRKAR1A-217ENST00000589228 TBC1D8BQ0IIM8 1120 aa13.64□□□□□ -0.23
PRKAR1A-217ENST00000589228 LRRC8AQ8IWT6 810 aa13.64□□□□□ -0.23
PRKAR1A-217ENST00000589228 PUS7LQ9H0K6 701 aaKnown RBP13.64□□□□□ -0.23
PRKAR1A-217ENST00000589228 CROCC2H7BZ55 1655 aa13.64□□□□□ -0.23
PRKAR1A-217ENST00000589228 SPHKAPQ2M3C7 1700 aa13.64□□□□□ -0.23
PRKAR1A-217ENST00000589228 A2ML1A8K2U0 1454 aa13.64□□□□□ -0.23
PRKAR1A-217ENST00000589228 RDXP35241 583 aaKnown RBP13.64□□□□□ -0.23
PRKAR1A-217ENST00000589228 CCDC122Q5T0U0 273 aa13.64□□□□□ -0.23
PRKAR1A-217ENST00000589228 KRT79Q5XKE5 535 aa13.64□□□□□ -0.23
PRKAR1A-217ENST00000589228 WWC2Q6AWC2 1192 aa13.64□□□□□ -0.23
PRKAR1A-217ENST00000589228 FEZ1Q99689 392 aa13.64□□□□□ -0.23
PRKAR1A-217ENST00000589228 ZBTB1Q9Y2K1 713 aa13.64□□□□□ -0.23
PRKAR1A-217ENST00000589228 TULP4Q9NRJ4 1543 aa13.64□□□□□ -0.23
PRKAR1A-217ENST00000589228 CHGBP05060 677 aa13.64□□□□□ -0.23
PRKAR1A-217ENST00000589228 MCM3P25205 808 aa13.64□□□□□ -0.23
PRKAR1A-217ENST00000589228 KRT9P35527 623 aa13.64□□□□□ -0.23
PRKAR1A-217ENST00000589228 GOLGA8FQ08AF8 430 aa13.64□□□□□ -0.23
PRKAR1A-217ENST00000589228 GOLGA8DPQ0D2H9 430 aa13.64□□□□□ -0.23
PRKAR1A-217ENST00000589228 PARP10Q53GL7 1025 aa13.64□□□□□ -0.23
PRKAR1A-217ENST00000589228 CNGA4Q8IV77 575 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms