RNA–Protein interactions for RNA: ENST00000589223.5

AP3D1-206, Transcript of adaptor related protein complex 3 subunit delta 1, humanhuman

TSL 2

Gene AP3D1, Length 3,357 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1-206ENST00000589223 UTP14CQ5TAP6 766 aaKnown RBP13.91□□□□□ -0.18
AP3D1-206ENST00000589223 ZNF710Q8N1W2 664 aa13.91□□□□□ -0.18
AP3D1-206ENST00000589223 FAM217BQ9NTX9 383 aaPredicted RBP13.91□□□□□ -0.18
AP3D1-206ENST00000589223 BCL9O00512 1426 aa13.91□□□□□ -0.18
AP3D1-206ENST00000589223 SLIT2O94813 1529 aa13.91□□□□□ -0.18
AP3D1-206ENST00000589223 SH2B2O14492 632 aaPredicted RBP13.91□□□□□ -0.18
AP3D1-206ENST00000589223 SLC5A1P13866 664 aa13.91□□□□□ -0.18
AP3D1-206ENST00000589223 ANO1Q5XXA6 986 aa13.91□□□□□ -0.18
AP3D1-206ENST00000589223 FMR1NBQ8N0W7 255 aaPredicted RBP13.91□□□□□ -0.18
AP3D1-206ENST00000589223 CPVLQ9H3G5 476 aa13.91□□□□□ -0.18
AP3D1-206ENST00000589223 TNS2Q63HR2 1409 aa13.91□□□□□ -0.18
AP3D1-206ENST00000589223 TCRBV5S4A2TA0A5A2 114 aa13.91□□□□□ -0.18
AP3D1-206ENST00000589223 CDC25AP30304 524 aa13.91□□□□□ -0.18
AP3D1-206ENST00000589223 TMC6Q7Z403 805 aa13.91□□□□□ -0.18
AP3D1-206ENST00000589223 LPIN2Q92539 896 aa13.91□□□□□ -0.18
AP3D1-206ENST00000589223 DPF2Q92785 391 aa13.91□□□□□ -0.18
AP3D1-206ENST00000589223 UIMC1Q96RL1 719 aa13.91□□□□□ -0.18
AP3D1-206ENST00000589223 AGXT2Q9BYV1 514 aa13.91□□□□□ -0.18
AP3D1-206ENST00000589223 LY9Q9HBG7 655 aa13.91□□□□□ -0.18
AP3D1-206ENST00000589223 AATFQ9NY61 560 aaKnown RBP eCLIP13.91□□□□□ -0.18
AP3D1-206ENST00000589223 IGHMBP2P38935 993 aaKnown RBP13.9□□□□□ -0.18
AP3D1-206ENST00000589223 EARS2Q5JPH6 523 aaKnown RBP13.9□□□□□ -0.18
AP3D1-206ENST00000589223 EEF2KMTQ96G04 330 aa13.9□□□□□ -0.18
AP3D1-206ENST00000589223 MAP3K12Q12852 859 aa13.9□□□□□ -0.18
AP3D1-206ENST00000589223 MFSD6Q6ZSS7 791 aa13.9□□□□□ -0.18
AP3D1-206ENST00000589223 IGDCC4Q8TDY8 1250 aa13.9□□□□□ -0.18
AP3D1-206ENST00000589223 XPO4Q9C0E2 1151 aaKnown RBP13.9□□□□□ -0.18
AP3D1-206ENST00000589223 ALDH8A1Q9H2A2 487 aaPredicted RBP13.9□□□□□ -0.18
AP3D1-206ENST00000589223 SLC3A2P08195 630 aaKnown RBP13.89□□□□□ -0.19
AP3D1-206ENST00000589223 EIF5P55010 431 aaKnown RBP13.89□□□□□ -0.19
AP3D1-206ENST00000589223 STX1AQ16623 288 aa13.89□□□□□ -0.19
AP3D1-206ENST00000589223 KLHL10Q6JEL2 608 aa13.89□□□□□ -0.19
AP3D1-206ENST00000589223 SHC4Q6S5L8 630 aa13.89□□□□□ -0.19
AP3D1-206ENST00000589223 SMYD4Q8IYR2 804 aaPredicted RBP13.89□□□□□ -0.19
AP3D1-206ENST00000589223 ZNF34Q8IZ26 560 aa13.89□□□□□ -0.19
AP3D1-206ENST00000589223 LLPHQ9BRT6 129 aaKnown RBP13.89□□□□□ -0.19
AP3D1-206ENST00000589223 NWD2Q9ULI1 1742 aa13.89□□□□□ -0.19
AP3D1-206ENST00000589223 ZFYP08048 801 aaPredicted RBP13.89□□□□□ -0.19
AP3D1-206ENST00000589223 TNNT1P13805 278 aa13.89□□□□□ -0.19
AP3D1-206ENST00000589223 U2AF2P26368 475 aaKnown RBP eCLIP13.89□□□□□ -0.191e-7■■■■■ 32.6
AP3D1-206ENST00000589223 LONRF3Q496Y0 759 aa13.89□□□□□ -0.19
AP3D1-206ENST00000589223 GPIHBP1Q8IV16 184 aa13.89□□□□□ -0.19
AP3D1-206ENST00000589223 PCDHB6Q9Y5E3 794 aa13.89□□□□□ -0.19
AP3D1-206ENST00000589223 NUP188Q5SRE5 1749 aa13.89□□□□□ -0.19
AP3D1-206ENST00000589223 ABCA3Q99758 1704 aa13.89□□□□□ -0.19
AP3D1-206ENST00000589223 TMEM232C9JQI7 657 aa13.89□□□□□ -0.19
AP3D1-206ENST00000589223 CAMTA2O94983 1202 aa13.89□□□□□ -0.19
AP3D1-206ENST00000589223 PLEKHA8P1O95397 391 aa13.89□□□□□ -0.19
AP3D1-206ENST00000589223 PRDX5P30044 214 aa13.89□□□□□ -0.19
AP3D1-206ENST00000589223 BCL2L12Q9HB09 334 aa13.89□□□□□ -0.19
AP3D1-206ENST00000589223 ITGB4P16144 1822 aa13.89□□□□□ -0.19
AP3D1-206ENST00000589223 PRR29P0C7W0 189 aa13.88□□□□□ -0.19
AP3D1-206ENST00000589223 SKILP12757 684 aa13.88□□□□□ -0.19
AP3D1-206ENST00000589223 AFMP43652 599 aa13.88□□□□□ -0.19
AP3D1-206ENST00000589223 STX17P56962 302 aa13.88□□□□□ -0.19
AP3D1-206ENST00000589223 TRIM28Q13263 835 aaKnown RBP13.88□□□□□ -0.19
AP3D1-206ENST00000589223 TBC1D9BQ66K14 1250 aa13.88□□□□□ -0.19
AP3D1-206ENST00000589223 LINC00116Q8NCU8 138 aa13.88□□□□□ -0.19
AP3D1-206ENST00000589223 CABP5Q9NP86 173 aa13.88□□□□□ -0.19
AP3D1-206ENST00000589223 PLA2G4DQ86XP0 818 aa13.88□□□□□ -0.19
AP3D1-206ENST00000589223 PDCL2Q8N4E4 241 aa13.88□□□□□ -0.19
AP3D1-206ENST00000589223 TEX13AQ9BXU3 409 aaPredicted RBP13.88□□□□□ -0.19
AP3D1-206ENST00000589223 KIF3AQ9Y496 699 aa13.88□□□□□ -0.19
AP3D1-206ENST00000589223 GOLGA6L6A8MZA4 724 aa13.88□□□□□ -0.19
AP3D1-206ENST00000589223 SYKP43405 635 aa13.88□□□□□ -0.19
AP3D1-206ENST00000589223 AXDND1Q5T1B0 1012 aaPredicted RBP13.88□□□□□ -0.19
AP3D1-206ENST00000589223 FOXP4Q8IVH2 680 aaPredicted RBP13.88□□□□□ -0.19
AP3D1-206ENST00000589223 DIS3L2Q8IYB7 885 aaKnown RBP13.88□□□□□ -0.19
AP3D1-206ENST00000589223 TDRD7Q8NHU6 1098 aaKnown RBP13.88□□□□□ -0.19
AP3D1-206ENST00000589223 SHISA4Q96DD7 197 aa13.88□□□□□ -0.19
AP3D1-206ENST00000589223 TMEM51Q9NW97 253 aa13.88□□□□□ -0.19
AP3D1-206ENST00000589223 LAMB4A4D0S4 1761 aa13.87□□□□□ -0.19
AP3D1-206ENST00000589223 IL6STP40189 918 aaPredicted RBP13.87□□□□□ -0.19
AP3D1-206ENST00000589223 UBR2Q8IWV8 1755 aa13.87□□□□□ -0.19
AP3D1-206ENST00000589223 NGLY1Q96IV0 654 aa13.87□□□□□ -0.19
AP3D1-206ENST00000589223 PLIN2Q99541 437 aa13.87□□□□□ -0.19
AP3D1-206ENST00000589223 GTPBP4Q9BZE4 634 aaKnown RBP13.87□□□□□ -0.19
AP3D1-206ENST00000589223 KIF20AO95235 890 aa13.87□□□□□ -0.19
AP3D1-206ENST00000589223 SLURP2P0DP57 97 aa13.87□□□□□ -0.19
AP3D1-206ENST00000589223 PDE4BQ07343 736 aa13.87□□□□□ -0.19
AP3D1-206ENST00000589223 WTAPQ15007 396 aa13.87□□□□□ -0.19
AP3D1-206ENST00000589223 CEP57L1Q8IYX8 460 aa13.87□□□□□ -0.19
AP3D1-206ENST00000589223 ZNF384Q8TF68 577 aa13.87□□□□□ -0.19
AP3D1-206ENST00000589223 TRERF1Q96PN7 1200 aa13.87□□□□□ -0.19
AP3D1-206ENST00000589223 KIAA1468Q9P260 1216 aa13.87□□□□□ -0.19
AP3D1-206ENST00000589223 SPATA31A1Q5TZJ5 1347 aa13.86□□□□□ -0.19
AP3D1-206ENST00000589223 FGFR2P21802 821 aa13.86□□□□□ -0.19
AP3D1-206ENST00000589223 TRIM29Q14134 588 aa13.86□□□□□ -0.19
AP3D1-206ENST00000589223 ADALQ6DHV7 355 aa13.86□□□□□ -0.19
AP3D1-206ENST00000589223 RTEL1Q9NZ71 1219 aa13.86□□□□□ -0.19
AP3D1-206ENST00000589223 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.86□□□□□ -0.19
AP3D1-206ENST00000589223 ROBO1Q9Y6N7 1651 aa13.86□□□□□ -0.19
AP3D1-206ENST00000589223 PATL2C9JE40 543 aaKnown RBP13.86□□□□□ -0.19
AP3D1-206ENST00000589223 AKNAD1Q5T1N1 836 aa13.86□□□□□ -0.19
AP3D1-206ENST00000589223 LRRN4CLQ8ND94 238 aa13.86□□□□□ -0.19
AP3D1-206ENST00000589223 MYRIPQ8NFW9 859 aa13.86□□□□□ -0.19
AP3D1-206ENST00000589223 RASGRP4Q8TDF6 673 aa13.86□□□□□ -0.19
AP3D1-206ENST00000589223 USP17L12C9JPN9 530 aa13.86□□□□□ -0.19
AP3D1-206ENST00000589223 USP17L21D6R901 530 aa13.86□□□□□ -0.19
AP3D1-206ENST00000589223 NTSR2O95665 410 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 175.3 ms