RNA–Protein interactions for RNA: ENST00000588937.5

MBD1-217, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 1,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-217ENST00000588937 ALG1Q9BT22 464 aa17.77■□□□□ 0.44
MBD1-217ENST00000588937 BRIP1Q9BX63 1249 aa17.77■□□□□ 0.44
MBD1-217ENST00000588937 TOMM22Q9NS69 142 aa17.77■□□□□ 0.44
MBD1-217ENST00000588937 NOL7Q9UMY1 257 aaKnown RBP17.77■□□□□ 0.44
MBD1-217ENST00000588937 CAVIN2O95810 425 aa17.76■□□□□ 0.43
MBD1-217ENST00000588937 APBA3O96018 575 aa17.76■□□□□ 0.43
MBD1-217ENST00000588937 ME1P48163 572 aa17.76■□□□□ 0.43
MBD1-217ENST00000588937 TRIM29Q14134 588 aa17.76■□□□□ 0.43
MBD1-217ENST00000588937 RRP12Q5JTH9 1297 aaKnown RBP17.76■□□□□ 0.43
MBD1-217ENST00000588937 SASS6Q6UVJ0 657 aa17.76■□□□□ 0.43
MBD1-217ENST00000588937 FAM200AQ8TCP9 573 aa17.76■□□□□ 0.43
MBD1-217ENST00000588937 RIOK1Q9BRS2 568 aaKnown RBP17.76■□□□□ 0.43
MBD1-217ENST00000588937 POLR3EQ9NVU0 708 aa17.76■□□□□ 0.43
MBD1-217ENST00000588937 CCDC196A0A1B0GTZ2 297 aa17.76■□□□□ 0.43
MBD1-217ENST00000588937 TM4SF1P30408 202 aa17.76■□□□□ 0.43
MBD1-217ENST00000588937 ADGRA1Q86SQ6 560 aa17.76■□□□□ 0.43
MBD1-217ENST00000588937 NKX2-3Q8TAU0 364 aa17.76■□□□□ 0.43
MBD1-217ENST00000588937 ESR2Q92731 530 aa17.76■□□□□ 0.43
MBD1-217ENST00000588937 INCENPQ9NQS7 918 aa17.76■□□□□ 0.43
MBD1-217ENST00000588937 A0A1W2PQ27 194 aa17.75■□□□□ 0.43
MBD1-217ENST00000588937 A0A1W2PQ64 194 aa17.75■□□□□ 0.43
MBD1-217ENST00000588937 A0A1W2PQD8 194 aa17.75■□□□□ 0.43
MBD1-217ENST00000588937 PTMAP06454 111 aaKnown RBP17.75■□□□□ 0.43
MBD1-217ENST00000588937 CDC27P30260 824 aa17.75■□□□□ 0.43
MBD1-217ENST00000588937 KIF23Q02241 960 aaPredicted RBP17.75■□□□□ 0.43
MBD1-217ENST00000588937 SSRP1Q08945 709 aaKnown RBP17.75■□□□□ 0.43
MBD1-217ENST00000588937 STK38Q15208 465 aa17.75■□□□□ 0.43
MBD1-217ENST00000588937 SF3A1Q15459 793 aaKnown RBP17.75■□□□□ 0.43
MBD1-217ENST00000588937 NTRK3Q16288 839 aa17.75■□□□□ 0.43
MBD1-217ENST00000588937 MYSM1Q5VVJ2 828 aa17.75■□□□□ 0.43
MBD1-217ENST00000588937 ADALQ6DHV7 355 aa17.75■□□□□ 0.43
MBD1-217ENST00000588937 MAST2Q6P0Q8 1798 aa17.75■□□□□ 0.43
MBD1-217ENST00000588937 MINDY4BA8MYZ0 360 aa17.74■□□□□ 0.43
MBD1-217ENST00000588937 KINO60870 393 aaKnown RBP17.74■□□□□ 0.43
MBD1-217ENST00000588937 FAM160A1Q05DH4 1040 aa17.74■□□□□ 0.43
MBD1-217ENST00000588937 PPP2R5BQ15173 497 aa17.74■□□□□ 0.43
MBD1-217ENST00000588937 SPTY2D1Q68D10 685 aaPredicted RBP17.74■□□□□ 0.43
MBD1-217ENST00000588937 OTUD7BQ6GQQ9 843 aa17.74■□□□□ 0.43
MBD1-217ENST00000588937 CKAP2LQ8IYA6 745 aa17.74■□□□□ 0.43
MBD1-217ENST00000588937 CNBD1Q8NA66 436 aa17.74■□□□□ 0.43
MBD1-217ENST00000588937 LINC00301Q8NCQ3 95 aa17.74■□□□□ 0.43
MBD1-217ENST00000588937 SDR42E1Q8WUS8 393 aa17.74■□□□□ 0.43
MBD1-217ENST00000588937 UBAC1Q9BSL1 405 aa17.74■□□□□ 0.43
MBD1-217ENST00000588937 FTOQ9C0B1 505 aaKnown RBP eCLIP17.74■□□□□ 0.43
MBD1-217ENST00000588937 SENP2Q9HC62 589 aa17.74■□□□□ 0.43
MBD1-217ENST00000588937 USP25Q9UHP3 1055 aa17.74■□□□□ 0.43
MBD1-217ENST00000588937 LEMD3Q9Y2U8 911 aa17.74■□□□□ 0.43
MBD1-217ENST00000588937 MRVI1Q9Y6F6 885 aa17.74■□□□□ 0.43
MBD1-217ENST00000588937 CCDC88AQ3V6T2 1871 aa17.74■□□□□ 0.43
MBD1-217ENST00000588937 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.74■□□□□ 0.43
MBD1-217ENST00000588937 WTIPA6NIX2 430 aaPredicted RBP17.74■□□□□ 0.43
MBD1-217ENST00000588937 FMNL1O95466 1100 aaPredicted RBP17.74■□□□□ 0.43
MBD1-217ENST00000588937 IFNAR1P17181 557 aa17.74■□□□□ 0.43
MBD1-217ENST00000588937 RXRAP19793 462 aa17.74■□□□□ 0.43
MBD1-217ENST00000588937 GRAPQ13588 217 aa17.74■□□□□ 0.43
MBD1-217ENST00000588937 TRIM22Q8IYM9 498 aa17.74■□□□□ 0.43
MBD1-217ENST00000588937 GRAPLQ8TC17 118 aaPredicted RBP17.74■□□□□ 0.43
MBD1-217ENST00000588937 AKT1S1Q96B36 256 aa17.74■□□□□ 0.43
MBD1-217ENST00000588937 NSUN4Q96CB9 384 aaKnown RBP17.74■□□□□ 0.43
MBD1-217ENST00000588937 TACC3Q9Y6A5 838 aa17.74■□□□□ 0.43
MBD1-217ENST00000588937 ADCY5O95622 1261 aa17.73■□□□□ 0.43
MBD1-217ENST00000588937 POLR3DP05423 398 aaPredicted RBP17.73■□□□□ 0.43
MBD1-217ENST00000588937 GNL2Q13823 731 aaKnown RBP17.73■□□□□ 0.43
MBD1-217ENST00000588937 NFIXQ14938 502 aa17.73■□□□□ 0.43
MBD1-217ENST00000588937 RTN1Q16799 776 aa17.73■□□□□ 0.43
MBD1-217ENST00000588937 KRT40Q6A162 431 aa17.73■□□□□ 0.43
MBD1-217ENST00000588937 MRPS27Q92552 414 aaKnown RBP17.73■□□□□ 0.43
MBD1-217ENST00000588937 FAM217BQ9NTX9 383 aaPredicted RBP17.73■□□□□ 0.43
MBD1-217ENST00000588937 PCDHA7Q9UN72 937 aa17.73■□□□□ 0.43
MBD1-217ENST00000588937 ZKSCAN5Q9Y2L8 839 aa17.73■□□□□ 0.43
MBD1-217ENST00000588937 TNRC6CQ9HCJ0 1690 aaKnown RBP17.73■□□□□ 0.43
MBD1-217ENST00000588937 ECM29Q5VYK3 1845 aa17.72■□□□□ 0.43
MBD1-217ENST00000588937 SPTLC2O15270 562 aa17.72■□□□□ 0.43
MBD1-217ENST00000588937 ANO1Q5XXA6 986 aa17.72■□□□□ 0.43
MBD1-217ENST00000588937 CCDC144CPQ8IYA2 1237 aa17.72■□□□□ 0.43
MBD1-217ENST00000588937 CCDC24Q8N4L8 307 aa17.72■□□□□ 0.43
MBD1-217ENST00000588937 FSIP1Q8NA03 581 aa17.72■□□□□ 0.43
MBD1-217ENST00000588937 PHKBQ93100 1093 aa17.72■□□□□ 0.43
MBD1-217ENST00000588937 CRNKL1Q9BZJ0 848 aaKnown RBP17.72■□□□□ 0.43
MBD1-217ENST00000588937 TFCP2L1Q9NZI6 479 aa17.72■□□□□ 0.43
MBD1-217ENST00000588937 KLRK1P26718 216 aa17.71■□□□□ 0.43
MBD1-217ENST00000588937 MECOMQ03112 1051 aa17.71■□□□□ 0.43
MBD1-217ENST00000588937 SLC26A6Q9BXS9 759 aa17.71■□□□□ 0.43
MBD1-217ENST00000588937 ATP8A2Q9NTI2 1148 aa17.71■□□□□ 0.43
MBD1-217ENST00000588937 CLIC4Q9Y696 253 aa17.71■□□□□ 0.43
MBD1-217ENST00000588937 SLC3A2P08195 630 aaKnown RBP17.71■□□□□ 0.43
MBD1-217ENST00000588937 DYNLL1P63167 89 aaKnown RBP17.71■□□□□ 0.43
MBD1-217ENST00000588937 SNW1Q13573 536 aaKnown RBP17.71■□□□□ 0.43
MBD1-217ENST00000588937 ANO6Q4KMQ2 910 aa17.71■□□□□ 0.43
MBD1-217ENST00000588937 FLAD1Q8NFF5 587 aa17.71■□□□□ 0.43
MBD1-217ENST00000588937 ENGASEQ8NFI3 743 aa17.71■□□□□ 0.43
MBD1-217ENST00000588937 MYL10Q9BUA6 226 aa17.71■□□□□ 0.43
MBD1-217ENST00000588937 KIAA1551Q9HCM1 1747 aa17.71■□□□□ 0.43
MBD1-217ENST00000588937 DUOX1Q9NRD9 1551 aa17.71■□□□□ 0.43
MBD1-217ENST00000588937 ANKIB1Q9P2G1 1089 aa17.71■□□□□ 0.43
MBD1-217ENST00000588937 KIF28PB7ZC32 967 aa17.7■□□□□ 0.42
MBD1-217ENST00000588937 RANBP6O60518 1105 aaKnown RBP17.7■□□□□ 0.42
MBD1-217ENST00000588937 FGRP09769 529 aa17.7■□□□□ 0.42
MBD1-217ENST00000588937 GYS1P13807 737 aa17.7■□□□□ 0.42
MBD1-217ENST00000588937 ST5P78524 1137 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms