RNA–Protein interactions for RNA: ENST00000588812.5

CDK3-204, Transcript of cyclin dependent kinase 3, humanhuman

TSL 3

Gene CDK3, Length 570 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3-204ENST00000588812 DDRGK1Q96HY6 314 aa13.34□□□□□ -0.27
CDK3-204ENST00000588812 SEC62Q99442 399 aaKnown RBP13.34□□□□□ -0.27
CDK3-204ENST00000588812 DDX4Q9NQI0 724 aaKnown RBP13.34□□□□□ -0.27
CDK3-204ENST00000588812 ATP8A2Q9NTI2 1148 aa13.34□□□□□ -0.27
CDK3-204ENST00000588812 SCAF8Q9UPN6 1271 aaKnown RBP13.34□□□□□ -0.27
CDK3-204ENST00000588812 POLR2AP24928 1970 aaKnown RBP13.34□□□□□ -0.27
CDK3-204ENST00000588812 TRAF5O00463 557 aa13.33□□□□□ -0.28
CDK3-204ENST00000588812 NF2P35240 595 aa13.33□□□□□ -0.28
CDK3-204ENST00000588812 MAPKAPK5Q8IW41 473 aa13.33□□□□□ -0.28
CDK3-204ENST00000588812 CDCA5Q96FF9 252 aa13.33□□□□□ -0.28
CDK3-204ENST00000588812 TMEM39BQ9GZU3 492 aa13.33□□□□□ -0.28
CDK3-204ENST00000588812 OSBPL5Q9H0X9 879 aaPredicted RBP13.33□□□□□ -0.28
CDK3-204ENST00000588812 DHX36Q9H2U1 1008 aaKnown RBP13.33□□□□□ -0.28
CDK3-204ENST00000588812 SLC4A4Q9Y6R1 1079 aa13.33□□□□□ -0.28
CDK3-204ENST00000588812 FLT1P17948 1338 aa13.33□□□□□ -0.28
CDK3-204ENST00000588812 RPAP1Q9BWH6 1393 aaPredicted RBP13.32□□□□□ -0.28
CDK3-204ENST00000588812 COL2A1P02458 1487 aaPredicted RBP13.32□□□□□ -0.28
CDK3-204ENST00000588812 PATL2C9JE40 543 aaKnown RBP13.32□□□□□ -0.28
CDK3-204ENST00000588812 PRAMEF18Q5VWM3 479 aa13.32□□□□□ -0.28
CDK3-204ENST00000588812 GIMAP6Q6P9H5 292 aa13.32□□□□□ -0.28
CDK3-204ENST00000588812 CASC1Q6TDU7 716 aa13.32□□□□□ -0.28
CDK3-204ENST00000588812 ZSCAN29Q8IWY8 852 aaPredicted RBP13.32□□□□□ -0.28
CDK3-204ENST00000588812 TEPSINQ96N21 525 aa13.32□□□□□ -0.28
CDK3-204ENST00000588812 MKRN1Q9UHC7 482 aaKnown RBP13.32□□□□□ -0.28
CDK3-204ENST00000588812 CCDC171Q6TFL3 1326 aa13.32□□□□□ -0.28
CDK3-204ENST00000588812 RAD50Q92878 1312 aa13.32□□□□□ -0.28
CDK3-204ENST00000588812 PASKQ96RG2 1323 aa13.32□□□□□ -0.28
CDK3-204ENST00000588812 ATRNL1Q5VV63 1379 aa13.32□□□□□ -0.28
CDK3-204ENST00000588812 PRKAB2O43741 272 aa13.31□□□□□ -0.28
CDK3-204ENST00000588812 CDC45O75419 566 aa13.31□□□□□ -0.28
CDK3-204ENST00000588812 APPP05067 770 aa13.31□□□□□ -0.28
CDK3-204ENST00000588812 NBPF12Q5TAG4 269 aaPredicted RBP13.31□□□□□ -0.28
CDK3-204ENST00000588812 DLK2Q6UY11 383 aa13.31□□□□□ -0.28
CDK3-204ENST00000588812 CCDC129Q6ZRS4 1044 aa13.31□□□□□ -0.28
CDK3-204ENST00000588812 ZFPM1Q8IX07 1006 aa13.31□□□□□ -0.28
CDK3-204ENST00000588812 SDR42E1Q8WUS8 393 aa13.31□□□□□ -0.28
CDK3-204ENST00000588812 CSRNP1Q96S65 589 aa13.31□□□□□ -0.28
CDK3-204ENST00000588812 NACAP1Q9BZK3 213 aa13.31□□□□□ -0.28
CDK3-204ENST00000588812 DCP1AQ9NPI6 582 aaPredicted RBP13.31□□□□□ -0.28
CDK3-204ENST00000588812 DDTLA6NHG4 134 aaPredicted RBP13.3□□□□□ -0.28
CDK3-204ENST00000588812 GSG1L2A8MUP6 293 aa13.3□□□□□ -0.28
CDK3-204ENST00000588812 CELF2O95319 508 aaKnown RBP13.3□□□□□ -0.28
CDK3-204ENST00000588812 HLA-DOAP06340 250 aa13.3□□□□□ -0.28
CDK3-204ENST00000588812 TTC6Q86TZ1 520 aa13.3□□□□□ -0.28
CDK3-204ENST00000588812 ZNF589Q86UQ0 364 aaPredicted RBP13.3□□□□□ -0.28
CDK3-204ENST00000588812 AMOTL1Q8IY63 956 aa13.3□□□□□ -0.28
CDK3-204ENST00000588812 MCM9Q9NXL9 1143 aa13.3□□□□□ -0.28
CDK3-204ENST00000588812 PI4KBQ9UBF8 816 aa13.3□□□□□ -0.28
CDK3-204ENST00000588812 SGSM2O43147 1006 aa13.29□□□□□ -0.28
CDK3-204ENST00000588812 PPP1R12BO60237 982 aaPredicted RBP13.29□□□□□ -0.28
CDK3-204ENST00000588812 POLR3DP05423 398 aaPredicted RBP13.29□□□□□ -0.28
CDK3-204ENST00000588812 FKBP1BP68106 108 aa13.29□□□□□ -0.28
CDK3-204ENST00000588812 FMR1Q06787 632 aaKnown RBP eCLIP13.29□□□□□ -0.28
CDK3-204ENST00000588812 DCAF15Q66K64 600 aa13.29□□□□□ -0.28
CDK3-204ENST00000588812 SH3BP5LQ7L8J4 393 aa13.29□□□□□ -0.28
CDK3-204ENST00000588812 ZNF408Q9H9D4 720 aa13.29□□□□□ -0.28
CDK3-204ENST00000588812 SAP30BPQ9UHR5 308 aaKnown RBP13.29□□□□□ -0.28
CDK3-204ENST00000588812 PALD1Q9ULE6 856 aa13.29□□□□□ -0.28
CDK3-204ENST00000588812 FOCADQ5VW36 1801 aa13.29□□□□□ -0.28
CDK3-204ENST00000588812 PCNTO95613 3336 aa13.28□□□□□ -0.28
CDK3-204ENST00000588812 CDK5RAP2Q96SN8 1893 aa13.28□□□□□ -0.28
CDK3-204ENST00000588812 HSPD1P10809 573 aaKnown RBP13.28□□□□□ -0.28
CDK3-204ENST00000588812 TDO2P48775 406 aa13.28□□□□□ -0.28
CDK3-204ENST00000588812 ALX1Q15699 326 aa13.28□□□□□ -0.28
CDK3-204ENST00000588812 CST9Q5W186 159 aa13.28□□□□□ -0.28
CDK3-204ENST00000588812 FOXP4Q8IVH2 680 aaPredicted RBP13.28□□□□□ -0.28
CDK3-204ENST00000588812 CDAN1Q8IWY9 1227 aa13.28□□□□□ -0.28
CDK3-204ENST00000588812 IFNL3Q8IZI9 196 aa13.28□□□□□ -0.28
CDK3-204ENST00000588812 C2orf69Q8N8R5 385 aa13.28□□□□□ -0.28
CDK3-204ENST00000588812 ESYT1Q9BSJ8 1104 aa13.28□□□□□ -0.28
CDK3-204ENST00000588812 NAPBQ9H115 298 aa13.28□□□□□ -0.28
CDK3-204ENST00000588812 GBA2Q9HCG7 927 aaPredicted RBP13.28□□□□□ -0.28
CDK3-204ENST00000588812 ARPP21Q9UBL0 812 aaPredicted RBP13.28□□□□□ -0.28
CDK3-204ENST00000588812 HERC5Q9UII4 1024 aaKnown RBP13.28□□□□□ -0.28
CDK3-204ENST00000588812 TAOK2Q9UL54 1235 aa13.28□□□□□ -0.28
CDK3-204ENST00000588812 TMEM88BA6NKF7 163 aa13.27□□□□□ -0.29
CDK3-204ENST00000588812 USP17L12C9JPN9 530 aa13.27□□□□□ -0.29
CDK3-204ENST00000588812 USP17L21D6R901 530 aa13.27□□□□□ -0.29
CDK3-204ENST00000588812 TBC1D12O60347 775 aa13.27□□□□□ -0.29
CDK3-204ENST00000588812 APLP1P51693 650 aa13.27□□□□□ -0.29
CDK3-204ENST00000588812 MAP3K10Q02779 954 aa13.27□□□□□ -0.29
CDK3-204ENST00000588812 TTLL12Q14166 644 aaPredicted RBP13.27□□□□□ -0.29
CDK3-204ENST00000588812 SBK1Q52WX2 424 aa13.27□□□□□ -0.29
CDK3-204ENST00000588812 VPS53Q5VIR6 699 aa13.27□□□□□ -0.29
CDK3-204ENST00000588812 CTR9Q6PD62 1173 aa13.27□□□□□ -0.29
CDK3-204ENST00000588812 KIAA1211Q6ZU35 1233 aa13.27□□□□□ -0.29
CDK3-204ENST00000588812 ARMC9Q7Z3E5 817 aa13.27□□□□□ -0.29
CDK3-204ENST00000588812 CRACR2BQ8N4Y2 399 aaPredicted RBP13.27□□□□□ -0.29
CDK3-204ENST00000588812 DNAJC5GQ8N7S2 189 aa13.27□□□□□ -0.29
CDK3-204ENST00000588812 DSCC1Q9BVC3 393 aa13.27□□□□□ -0.29
CDK3-204ENST00000588812 TRIM34Q9BYJ4 488 aa13.27□□□□□ -0.29
CDK3-204ENST00000588812 EHD4Q9H223 541 aa13.27□□□□□ -0.29
CDK3-204ENST00000588812 EPB41L4AQ9HCS5 686 aaPredicted RBP13.27□□□□□ -0.29
CDK3-204ENST00000588812 SSC5DA1L4H1 1573 aa13.26□□□□□ -0.29
CDK3-204ENST00000588812 FOXP2O15409 715 aa13.26□□□□□ -0.29
CDK3-204ENST00000588812 ZMYM6O95789 1325 aa13.26□□□□□ -0.29
CDK3-204ENST00000588812 IREB2P48200 963 aaKnown RBP13.26□□□□□ -0.29
CDK3-204ENST00000588812 C12orf60Q5U649 245 aa13.26□□□□□ -0.29
CDK3-204ENST00000588812 MIGA2Q7L4E1 593 aa13.26□□□□□ -0.29
CDK3-204ENST00000588812 METTL16Q86W50 562 aaKnown RBP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms