RNA–Protein interactions for RNA: ENST00000588781.1

SPIDR-228, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 164 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-228ENST00000588781 MAGEB6Q8N7X4 407 aa8.28□□□□□ -1.08
SPIDR-228ENST00000588781 ZNF784Q8NCA9 323 aaPredicted RBP8.28□□□□□ -1.08
SPIDR-228ENST00000588781 GOLPH3LQ9H4A5 285 aa8.28□□□□□ -1.08
SPIDR-228ENST00000588781 FAM13BQ9NYF5 915 aa8.28□□□□□ -1.08
SPIDR-228ENST00000588781 MORC2Q9Y6X9 1032 aaPredicted RBP8.28□□□□□ -1.08
SPIDR-228ENST00000588781 DDX60Q8IY21 1712 aaKnown RBP8.28□□□□□ -1.08
SPIDR-228ENST00000588781 LAMB2P55268 1798 aa8.27□□□□□ -1.08
SPIDR-228ENST00000588781 AKAP11Q9UKA4 1901 aa8.27□□□□□ -1.09
SPIDR-228ENST00000588781 FAM237AA0A1B0GTK4 181 aa8.27□□□□□ -1.09
SPIDR-228ENST00000588781 IKBKBO14920 756 aa8.27□□□□□ -1.09
SPIDR-228ENST00000588781 ZBTB22O15209 634 aa8.27□□□□□ -1.09
SPIDR-228ENST00000588781 FOXP2O15409 715 aa8.27□□□□□ -1.09
SPIDR-228ENST00000588781 ZNF202O95125 648 aa8.27□□□□□ -1.09
SPIDR-228ENST00000588781 MBD4O95243 580 aa8.27□□□□□ -1.09
SPIDR-228ENST00000588781 DEXIO95424 95 aa8.27□□□□□ -1.09
SPIDR-228ENST00000588781 FMNL1O95466 1100 aaPredicted RBP8.27□□□□□ -1.09
SPIDR-228ENST00000588781 U2AF2P26368 475 aaKnown RBP eCLIP8.27□□□□□ -1.09
SPIDR-228ENST00000588781 ATP6V1AP38606 617 aa8.27□□□□□ -1.09
SPIDR-228ENST00000588781 SYKP43405 635 aa8.27□□□□□ -1.09
SPIDR-228ENST00000588781 CRKLP46109 303 aaKnown RBP8.27□□□□□ -1.09
SPIDR-228ENST00000588781 EZH2Q15910 746 aaKnown RBP8.27□□□□□ -1.09
SPIDR-228ENST00000588781 RTN1Q16799 776 aa8.27□□□□□ -1.09
SPIDR-228ENST00000588781 SLFNL1Q499Z3 407 aa8.27□□□□□ -1.09
SPIDR-228ENST00000588781 CAVIN4Q5BKX8 364 aa8.27□□□□□ -1.09
SPIDR-228ENST00000588781 RILPL1Q5EBL4 403 aa8.27□□□□□ -1.09
SPIDR-228ENST00000588781 KRT40Q6A162 431 aa8.27□□□□□ -1.09
SPIDR-228ENST00000588781 TBC1D10CQ8IV04 446 aa8.27□□□□□ -1.09
SPIDR-228ENST00000588781 ANKRD18AQ8IVF6 992 aa8.27□□□□□ -1.09
SPIDR-228ENST00000588781 IGDCC4Q8TDY8 1250 aa8.27□□□□□ -1.09
SPIDR-228ENST00000588781 ESR2Q92731 530 aa8.27□□□□□ -1.09
SPIDR-228ENST00000588781 ZNF830Q96NB3 372 aaPredicted RBP8.27□□□□□ -1.09
SPIDR-228ENST00000588781 CAMKK2Q96RR4 588 aa8.27□□□□□ -1.09
SPIDR-228ENST00000588781 PYM1Q9BRP8 204 aaKnown RBP8.27□□□□□ -1.09
SPIDR-228ENST00000588781 UBAC1Q9BSL1 405 aa8.27□□□□□ -1.09
SPIDR-228ENST00000588781 NYXQ9GZU5 481 aa8.27□□□□□ -1.09
SPIDR-228ENST00000588781 LY9Q9HBG7 655 aa8.27□□□□□ -1.09
SPIDR-228ENST00000588781 BRMS1Q9HCU9 246 aa8.27□□□□□ -1.09
SPIDR-228ENST00000588781 RBM28Q9NW13 759 aaKnown RBP8.27□□□□□ -1.09
SPIDR-228ENST00000588781 LRP2BPQ9P2M1 347 aa8.27□□□□□ -1.09
SPIDR-228ENST00000588781 DENND2AQ9ULE3 1009 aa8.27□□□□□ -1.09
SPIDR-228ENST00000588781 SLC4A4Q9Y6R1 1079 aa8.27□□□□□ -1.09
SPIDR-228ENST00000588781 PDS5AQ29RF7 1337 aaKnown RBP8.27□□□□□ -1.09
SPIDR-228ENST00000588781 SPATA31A1Q5TZJ5 1347 aa8.27□□□□□ -1.09
SPIDR-228ENST00000588781 UBN2Q6ZU65 1347 aa8.27□□□□□ -1.09
SPIDR-228ENST00000588781 DOCK2Q92608 1830 aa8.26□□□□□ -1.09
SPIDR-228ENST00000588781 C4AP0C0L4 1744 aa8.26□□□□□ -1.09
SPIDR-228ENST00000588781 C4BP0C0L5 1744 aa8.26□□□□□ -1.09
SPIDR-228ENST00000588781 NRAPQ86VF7 1730 aa8.26□□□□□ -1.09
SPIDR-228ENST00000588781 DOT1LQ8TEK3 1739 aa8.26□□□□□ -1.09
SPIDR-228ENST00000588781 LOC102724428A0A0B4J2F2 783 aa8.26□□□□□ -1.09
SPIDR-228ENST00000588781 DCAF8L1A6NGE4 600 aa8.26□□□□□ -1.09
SPIDR-228ENST00000588781 B4E1Z4 1266 aa8.26□□□□□ -1.09
SPIDR-228ENST00000588781 AP5Z1O43299 807 aa8.26□□□□□ -1.09
SPIDR-228ENST00000588781 CAMTA2O94983 1202 aa8.26□□□□□ -1.09
SPIDR-228ENST00000588781 POLR3DP05423 398 aaPredicted RBP8.26□□□□□ -1.09
SPIDR-228ENST00000588781 KCNJ6P48051 423 aa8.26□□□□□ -1.09
SPIDR-228ENST00000588781 NDUFA8P51970 172 aa8.26□□□□□ -1.09
SPIDR-228ENST00000588781 SIK1P57059 783 aa8.26□□□□□ -1.09
SPIDR-228ENST00000588781 C1QTNF8P60827 252 aa8.26□□□□□ -1.09
SPIDR-228ENST00000588781 RASGRF1Q13972 1273 aa8.26□□□□□ -1.09
SPIDR-228ENST00000588781 TPD52L1Q16890 204 aaPredicted RBP8.26□□□□□ -1.09
SPIDR-228ENST00000588781 CT47A1Q5JQC4 288 aaPredicted RBP8.26□□□□□ -1.09
SPIDR-228ENST00000588781 SUSD4Q5VX71 490 aa8.26□□□□□ -1.09
SPIDR-228ENST00000588781 BARGINQ6ZT62 677 aa8.26□□□□□ -1.09
SPIDR-228ENST00000588781 C11orf57Q6ZUT1 292 aaPredicted RBP8.26□□□□□ -1.09
SPIDR-228ENST00000588781 CYB5R4Q7L1T6 521 aa8.26□□□□□ -1.09
SPIDR-228ENST00000588781 MICU3Q86XE3 530 aa8.26□□□□□ -1.09
SPIDR-228ENST00000588781 VPS37DQ86XT2 251 aa8.26□□□□□ -1.09
SPIDR-228ENST00000588781 AOPEPQ8N6M6 819 aa8.26□□□□□ -1.09
SPIDR-228ENST00000588781 KRI1Q8N9T8 703 aaKnown RBP8.26□□□□□ -1.09
SPIDR-228ENST00000588781 CCDC112Q8NEF3 446 aa8.26□□□□□ -1.09
SPIDR-228ENST00000588781 SLC4A9Q96Q91 983 aa8.26□□□□□ -1.09
SPIDR-228ENST00000588781 FOXP1Q9H334 677 aaPredicted RBP8.26□□□□□ -1.09
SPIDR-228ENST00000588781 KCNF1Q9H3M0 494 aa8.26□□□□□ -1.09
SPIDR-228ENST00000588781 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.26□□□□□ -1.09
SPIDR-228ENST00000588781 KCND1Q9NSA2 647 aa8.26□□□□□ -1.09
SPIDR-228ENST00000588781 ANAPC4Q9UJX5 808 aa8.26□□□□□ -1.09
SPIDR-228ENST00000588781 WWC3Q9ULE0 1092 aa8.26□□□□□ -1.09
SPIDR-228ENST00000588781 NIP7Q9Y221 180 aaKnown RBP eCLIP8.26□□□□□ -1.09
SPIDR-228ENST00000588781 CLIC4Q9Y696 253 aa8.26□□□□□ -1.09
SPIDR-228ENST00000588781 CHD4Q14839 1912 aa8.26□□□□□ -1.09
SPIDR-228ENST00000588781 ZNF831Q5JPB2 1677 aa8.26□□□□□ -1.09
SPIDR-228ENST00000588781 THSD7AQ9UPZ6 1657 aa8.25□□□□□ -1.09
SPIDR-228ENST00000588781 A0A0G2JLW4 131 aa8.25□□□□□ -1.09
SPIDR-228ENST00000588781 MAGEB6P1A0A0J9YX57 407 aa8.25□□□□□ -1.09
SPIDR-228ENST00000588781 A0A1B0GVL5 298 aa8.25□□□□□ -1.09
SPIDR-228ENST00000588781 GSG1L2A8MUP6 293 aa8.25□□□□□ -1.09
SPIDR-228ENST00000588781 DTNBO60941 627 aa8.25□□□□□ -1.09
SPIDR-228ENST00000588781 NTSR2O95665 410 aa8.25□□□□□ -1.09
SPIDR-228ENST00000588781 PFKFB1P16118 471 aa8.25□□□□□ -1.09
SPIDR-228ENST00000588781 SF3B3Q15393 1217 aaKnown RBP8.25□□□□□ -1.09
SPIDR-228ENST00000588781 CCDC178Q5BJE1 867 aa8.25□□□□□ -1.09
SPIDR-228ENST00000588781 RESP18Q5W5W9 173 aa8.25□□□□□ -1.09
SPIDR-228ENST00000588781 INTS5Q6P9B9 1019 aaKnown RBP8.25□□□□□ -1.09
SPIDR-228ENST00000588781 PI16Q6UXB8 463 aa8.25□□□□□ -1.09
SPIDR-228ENST00000588781 NOSTRINQ8IVI9 506 aa8.25□□□□□ -1.09
SPIDR-228ENST00000588781 TRIML1Q8N9V2 468 aa8.25□□□□□ -1.09
SPIDR-228ENST00000588781 ZNF579Q8NAF0 562 aaKnown RBP8.25□□□□□ -1.09
SPIDR-228ENST00000588781 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.25□□□□□ -1.09
SPIDR-228ENST00000588781 SLC26A6Q9BXS9 759 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms