RNA–Protein interactions for RNA: ENST00000588555.1

SCAMP4-210, Transcript of secretory carrier membrane protein 4, humanhuman

Gene SCAMP4, Length 1,785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-210ENST00000588555 HSP90AA1P07900 732 aaKnown RBP30.8■■■□□ 2.52
SCAMP4-210ENST00000588555 ANTXR2P58335 489 aa30.8■■■□□ 2.52
SCAMP4-210ENST00000588555 TRDNQ13061 729 aa30.8■■■□□ 2.52
SCAMP4-210ENST00000588555 FBXL16Q8N461 479 aa30.8■■■□□ 2.52
SCAMP4-210ENST00000588555 LRRC2Q9BYS8 371 aa30.8■■■□□ 2.52
SCAMP4-210ENST00000588555 ARPP21Q9UBL0 812 aaPredicted RBP30.8■■■□□ 2.52
SCAMP4-210ENST00000588555 TPCN1Q9ULQ1 816 aa30.8■■■□□ 2.52
SCAMP4-210ENST00000588555 VIL1P09327 827 aaKnown RBP30.79■■■□□ 2.52
SCAMP4-210ENST00000588555 MCM5P33992 734 aa30.79■■■□□ 2.52
SCAMP4-210ENST00000588555 USP5P45974 858 aa30.79■■■□□ 2.52
SCAMP4-210ENST00000588555 CRKP46108 304 aa30.79■■■□□ 2.52
SCAMP4-210ENST00000588555 TEX11Q8IYF3 940 aa30.79■■■□□ 2.52
SCAMP4-210ENST00000588555 TGFBRAP1Q8WUH2 860 aa30.79■■■□□ 2.52
SCAMP4-210ENST00000588555 FOXD4L1Q9NU39 408 aa30.79■■■□□ 2.52
SCAMP4-210ENST00000588555 WDR19Q8NEZ3 1342 aa30.79■■■□□ 2.52
SCAMP4-210ENST00000588555 RAD17O75943 681 aa30.79■■■□□ 2.52
SCAMP4-210ENST00000588555 APOBEC3HQ6NTF7 200 aaKnown RBP30.79■■■□□ 2.52
SCAMP4-210ENST00000588555 RSBN1LQ6PCB5 846 aaPredicted RBP30.79■■■□□ 2.52
SCAMP4-210ENST00000588555 CHST3Q7LGC8 479 aa30.79■■■□□ 2.52
SCAMP4-210ENST00000588555 PSMD14O00487 310 aa30.78■■■□□ 2.52
SCAMP4-210ENST00000588555 MFSD6Q6ZSS7 791 aa30.78■■■□□ 2.52
SCAMP4-210ENST00000588555 ZSCAN31Q96LW9 406 aaPredicted RBP30.78■■■□□ 2.52
SCAMP4-210ENST00000588555 ZDHHC15Q96MV8 337 aa30.78■■■□□ 2.52
SCAMP4-210ENST00000588555 CNNM2Q9H8M5 875 aa30.78■■■□□ 2.52
SCAMP4-210ENST00000588555 MYO3BQ8WXR4 1341 aa30.78■■■□□ 2.52
SCAMP4-210ENST00000588555 B4E1Z4 1266 aa30.77■■■□□ 2.52
SCAMP4-210ENST00000588555 EVX2Q03828 476 aa30.77■■■□□ 2.52
SCAMP4-210ENST00000588555 ME3Q16798 604 aa30.77■■■□□ 2.52
SCAMP4-210ENST00000588555 GMLQ99445 158 aa30.77■■■□□ 2.52
SCAMP4-210ENST00000588555 MCM9Q9NXL9 1143 aa30.77■■■□□ 2.52
SCAMP4-210ENST00000588555 PRC1O43663 620 aa30.77■■■□□ 2.52
SCAMP4-210ENST00000588555 RNF41Q9H4P4 317 aaPredicted RBP30.77■■■□□ 2.52
SCAMP4-210ENST00000588555 SH2B1Q9NRF2 756 aaPredicted RBP30.77■■■□□ 2.52
SCAMP4-210ENST00000588555 SERPINA10Q9UK55 444 aa30.77■■■□□ 2.52
SCAMP4-210ENST00000588555 UTRNP46939 3433 aa30.76■■■□□ 2.51
SCAMP4-210ENST00000588555 FLT1P17948 1338 aa30.76■■■□□ 2.51
SCAMP4-210ENST00000588555 FGRP09769 529 aa30.76■■■□□ 2.51
SCAMP4-210ENST00000588555 USP17L8P0C7I0 530 aa30.76■■■□□ 2.51
SCAMP4-210ENST00000588555 PRELPP51888 382 aa30.76■■■□□ 2.51
SCAMP4-210ENST00000588555 RASSF7Q02833 373 aa30.76■■■□□ 2.51
SCAMP4-210ENST00000588555 CYB5R4Q7L1T6 521 aa30.76■■■□□ 2.51
SCAMP4-210ENST00000588555 MAPKAPK5Q8IW41 473 aa30.76■■■□□ 2.51
SCAMP4-210ENST00000588555 BRF1Q92994 677 aa30.76■■■□□ 2.51
SCAMP4-210ENST00000588555 INTS4Q96HW7 963 aaKnown RBP30.76■■■□□ 2.51
SCAMP4-210ENST00000588555 CYP2D6P10635 497 aa30.75■■■□□ 2.51
SCAMP4-210ENST00000588555 KRT23Q9C075 422 aa30.75■■■□□ 2.51
SCAMP4-210ENST00000588555 ECM29Q5VYK3 1845 aa30.75■■■□□ 2.51
SCAMP4-210ENST00000588555 C12orf60Q5U649 245 aa30.74■■■□□ 2.51
SCAMP4-210ENST00000588555 JDP2Q8WYK2 163 aa30.74■■■□□ 2.51
SCAMP4-210ENST00000588555 CXCL9Q07325 125 aa30.74■■■□□ 2.51
SCAMP4-210ENST00000588555 CDC42EP5Q6NZY7 148 aa30.74■■■□□ 2.51
SCAMP4-210ENST00000588555 SYT17Q9BSW7 474 aa30.74■■■□□ 2.51
SCAMP4-210ENST00000588555 PCDHAC2Q9Y5I4 1007 aa30.74■■■□□ 2.51
SCAMP4-210ENST00000588555 WDHD1O75717 1129 aaPredicted RBP30.73■■■□□ 2.51
SCAMP4-210ENST00000588555 FGD1P98174 961 aa30.73■■■□□ 2.51
SCAMP4-210ENST00000588555 ST3GAL1Q11201 340 aa30.73■■■□□ 2.51
SCAMP4-210ENST00000588555 ROBO3Q96MS0 1386 aa30.73■■■□□ 2.51
SCAMP4-210ENST00000588555 KDM4AO75164 1064 aa30.72■■■□□ 2.51
SCAMP4-210ENST00000588555 PCP11498 1178 aaKnown RBP30.72■■■□□ 2.51
SCAMP4-210ENST00000588555 STK11IPQ8N1F8 1099 aa30.72■■■□□ 2.51
SCAMP4-210ENST00000588555 GPHNQ9NQX3 736 aaPredicted RBP30.72■■■□□ 2.51
SCAMP4-210ENST00000588555 USP40Q9NVE5 1235 aa30.72■■■□□ 2.51
SCAMP4-210ENST00000588555 ZSWIM5Q9P217 1185 aa30.72■■■□□ 2.51
SCAMP4-210ENST00000588555 DDX52Q9Y2R4 599 aaKnown RBP eCLIP30.72■■■□□ 2.51
SCAMP4-210ENST00000588555 MYH1P12882 1939 aa30.71■■■□□ 2.51
SCAMP4-210ENST00000588555 EVCP57679 992 aa30.71■■■□□ 2.51
SCAMP4-210ENST00000588555 ZBTB12Q9Y330 459 aaPredicted RBP30.7■■■□□ 2.51
SCAMP4-210ENST00000588555 APOBRQ0VD83 1088 aa30.69■■■□□ 2.5
SCAMP4-210ENST00000588555 RRP12Q5JTH9 1297 aaKnown RBP30.69■■■□□ 2.5
SCAMP4-210ENST00000588555 AGBL3Q8NEM8 1001 aa30.69■■■□□ 2.5
SCAMP4-210ENST00000588555 DDX4Q9NQI0 724 aaKnown RBP30.69■■■□□ 2.5
SCAMP4-210ENST00000588555 SAP30BPQ9UHR5 308 aaKnown RBP30.69■■■□□ 2.5
SCAMP4-210ENST00000588555 ORC4O43929 436 aa30.69■■■□□ 2.5
SCAMP4-210ENST00000588555 CIAPIN1Q6FI81 312 aa30.69■■■□□ 2.5
SCAMP4-210ENST00000588555 NECAB1Q8N987 351 aa30.69■■■□□ 2.5
SCAMP4-210ENST00000588555 TMEM87BQ96K49 555 aa30.69■■■□□ 2.5
SCAMP4-210ENST00000588555 CWC22Q9HCG8 908 aaKnown RBP30.69■■■□□ 2.5
SCAMP4-210ENST00000588555 TOMM22Q9NS69 142 aa30.69■■■□□ 2.5
SCAMP4-210ENST00000588555 CHMP5Q9NZZ3 219 aa30.69■■■□□ 2.5
SCAMP4-210ENST00000588555 PLCD1P51178 756 aa30.68■■■□□ 2.5
SCAMP4-210ENST00000588555 RBM5P52756 815 aaKnown RBP eCLIP30.68■■■□□ 2.5
SCAMP4-210ENST00000588555 SLC4A8Q2Y0W8 1093 aa30.68■■■□□ 2.5
SCAMP4-210ENST00000588555 CCDC83Q8IWF9 413 aa30.68■■■□□ 2.5
SCAMP4-210ENST00000588555 IGDCC4Q8TDY8 1250 aa30.68■■■□□ 2.5
SCAMP4-210ENST00000588555 CIZ1Q9ULV3 898 aaPredicted RBP30.68■■■□□ 2.5
SCAMP4-210ENST00000588555 SH2B2O14492 632 aaPredicted RBP30.67■■■□□ 2.5
SCAMP4-210ENST00000588555 SLC3A2P08195 630 aaKnown RBP30.67■■■□□ 2.5
SCAMP4-210ENST00000588555 CFAP100Q494V2 611 aa30.67■■■□□ 2.5
SCAMP4-210ENST00000588555 AMOTL1Q8IY63 956 aa30.67■■■□□ 2.5
SCAMP4-210ENST00000588555 ESR2Q92731 530 aa30.67■■■□□ 2.5
SCAMP4-210ENST00000588555 ANGEL1Q9UNK9 670 aaKnown RBP30.67■■■□□ 2.5
SCAMP4-210ENST00000588555 MTA3Q9BTC8 594 aa30.66■■■□□ 2.5
SCAMP4-210ENST00000588555 FZD9O00144 591 aa30.66■■■□□ 2.5
SCAMP4-210ENST00000588555 PRDM1O75626 825 aa30.66■■■□□ 2.5
SCAMP4-210ENST00000588555 POLR3DP05423 398 aaPredicted RBP30.66■■■□□ 2.5
SCAMP4-210ENST00000588555 ZNF274Q96GC6 653 aaPredicted RBP30.66■■■□□ 2.5
SCAMP4-210ENST00000588555 NFIAQ12857 509 aa30.65■■■□□ 2.5
SCAMP4-210ENST00000588555 PICALMQ13492 652 aa30.65■■■□□ 2.5
SCAMP4-210ENST00000588555 GTF3C6Q969F1 213 aa30.65■■■□□ 2.5
SCAMP4-210ENST00000588555 PFKFB2O60825 505 aa30.64■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms