RNA–Protein interactions for RNA: ENST00000588477.5

IFT20-216, Transcript of intraflagellar transport 20, humanhuman

TSL 5 BASIC

Gene IFT20, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-216ENST00000588477 PHF20L1A8MW92 1017 aa19.11■□□□□ 0.65
IFT20-216ENST00000588477 EYA2O00167 538 aa19.11■□□□□ 0.65
IFT20-216ENST00000588477 INHAP05111 366 aa19.11■□□□□ 0.65
IFT20-216ENST00000588477 PTPRAP18433 802 aa19.11■□□□□ 0.65
IFT20-216ENST00000588477 SCYL3Q8IZE3 742 aa19.11■□□□□ 0.65
IFT20-216ENST00000588477 DEFB118Q96PH6 123 aa19.11■□□□□ 0.65
IFT20-216ENST00000588477 USP44Q9H0E7 712 aa19.11■□□□□ 0.65
IFT20-216ENST00000588477 PICK1Q9NRD5 415 aa19.11■□□□□ 0.65
IFT20-216ENST00000588477 A0A1W2PPC1 479 aa19.1■□□□□ 0.65
IFT20-216ENST00000588477 SOX1O00570 391 aaPredicted RBP19.1■□□□□ 0.65
IFT20-216ENST00000588477 TNPO2O14787 897 aaKnown RBP19.1■□□□□ 0.65
IFT20-216ENST00000588477 RFX5P48382 616 aaPredicted RBP19.1■□□□□ 0.65
IFT20-216ENST00000588477 MRPL50Q8N5N7 158 aaKnown RBP19.1■□□□□ 0.65
IFT20-216ENST00000588477 PXYLP1Q8TE99 480 aa19.1■□□□□ 0.65
IFT20-216ENST00000588477 STAP2Q9UGK3 403 aa19.1■□□□□ 0.65
IFT20-216ENST00000588477 TAOK2Q9UL54 1235 aa19.1■□□□□ 0.65
IFT20-216ENST00000588477 AFG3L2Q9Y4W6 797 aa19.1■□□□□ 0.65
IFT20-216ENST00000588477 ATRNL1Q5VV63 1379 aa19.09■□□□□ 0.65
IFT20-216ENST00000588477 RGS3P49796 1198 aa19.09■□□□□ 0.65
IFT20-216ENST00000588477 ATG9AQ7Z3C6 839 aa19.09■□□□□ 0.65
IFT20-216ENST00000588477 LRCH3Q96II8 777 aa19.09■□□□□ 0.65
IFT20-216ENST00000588477 SLURP2P0DP57 97 aa19.08■□□□□ 0.64
IFT20-216ENST00000588477 IRF5Q13568 498 aa19.08■□□□□ 0.64
IFT20-216ENST00000588477 ZSCAN29Q8IWY8 852 aaPredicted RBP19.08■□□□□ 0.64
IFT20-216ENST00000588477 SMCR8Q8TEV9 937 aaPredicted RBP19.08■□□□□ 0.64
IFT20-216ENST00000588477 PAWRQ96IZ0 340 aaKnown RBP19.08■□□□□ 0.64
IFT20-216ENST00000588477 GNL3LQ9NVN8 582 aaKnown RBP19.08■□□□□ 0.64
IFT20-216ENST00000588477 SLC45A1Q9Y2W3 748 aa19.08■□□□□ 0.64
IFT20-216ENST00000588477 LRRFIP2Q9Y608 721 aaKnown RBP19.08■□□□□ 0.64
IFT20-216ENST00000588477 PTPRCP08575 1304 aa19.07■□□□□ 0.64
IFT20-216ENST00000588477 ENTPD3O75355 529 aa19.07■□□□□ 0.64
IFT20-216ENST00000588477 CAPN2P17655 700 aa19.07■□□□□ 0.64
IFT20-216ENST00000588477 SH3BP5LQ7L8J4 393 aa19.07■□□□□ 0.64
IFT20-216ENST00000588477 IDI2Q9BXS1 227 aa19.07■□□□□ 0.64
IFT20-216ENST00000588477 SIL1Q9H173 461 aa19.07■□□□□ 0.64
IFT20-216ENST00000588477 PAK6Q9NQU5 681 aaPredicted RBP19.07■□□□□ 0.64
IFT20-216ENST00000588477 SALL1Q9NSC2 1324 aa19.06■□□□□ 0.64
IFT20-216ENST00000588477 LAMA3Q16787 3333 aa19.06■□□□□ 0.64
IFT20-216ENST00000588477 TRIM75PA6NK02 468 aa19.06■□□□□ 0.64
IFT20-216ENST00000588477 ATP2B3Q16720 1220 aa19.06■□□□□ 0.64
IFT20-216ENST00000588477 ANKRD13CQ8N6S4 541 aa19.06■□□□□ 0.64
IFT20-216ENST00000588477 COA7Q96BR5 231 aa19.06■□□□□ 0.64
IFT20-216ENST00000588477 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.06■□□□□ 0.64
IFT20-216ENST00000588477 DENND2AQ9ULE3 1009 aa19.06■□□□□ 0.64
IFT20-216ENST00000588477 LOC285556D6RIA3 1793 aa19.06■□□□□ 0.64
IFT20-216ENST00000588477 DDX60LQ5H9U9 1706 aaKnown RBP19.05■□□□□ 0.64
IFT20-216ENST00000588477 PLXNB2O15031 1838 aa19.05■□□□□ 0.64
IFT20-216ENST00000588477 DDTLA6NHG4 134 aaPredicted RBP19.05■□□□□ 0.64
IFT20-216ENST00000588477 CTNND1O60716 968 aaKnown RBP19.05■□□□□ 0.64
IFT20-216ENST00000588477 PHKA1P46020 1223 aa19.05■□□□□ 0.64
IFT20-216ENST00000588477 MAP3K10Q02779 954 aa19.05■□□□□ 0.64
IFT20-216ENST00000588477 CCDC84Q86UT8 332 aaPredicted RBP19.05■□□□□ 0.64
IFT20-216ENST00000588477 CRISPLD2Q9H0B8 497 aa19.05■□□□□ 0.64
IFT20-216ENST00000588477 CEP126Q9P2H0 1117 aa19.05■□□□□ 0.64
IFT20-216ENST00000588477 PICALMQ13492 652 aa19.04■□□□□ 0.64
IFT20-216ENST00000588477 NECAB2Q7Z6G3 386 aa19.04■□□□□ 0.64
IFT20-216ENST00000588477 FAM9BQ8IZU0 186 aa19.04■□□□□ 0.64
IFT20-216ENST00000588477 DIS3LQ8TF46 1054 aaKnown RBP19.04■□□□□ 0.64
IFT20-216ENST00000588477 DDX4Q9NQI0 724 aaKnown RBP19.04■□□□□ 0.64
IFT20-216ENST00000588477 AGTPBP1Q9UPW5 1226 aa19.04■□□□□ 0.64
IFT20-216ENST00000588477 A0A0C4DFX4 3053 aa19.03■□□□□ 0.64
IFT20-216ENST00000588477 SEMA3EO15041 775 aa19.03■□□□□ 0.64
IFT20-216ENST00000588477 TREML2Q5T2D2 321 aa19.03■□□□□ 0.64
IFT20-216ENST00000588477 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.03■□□□□ 0.64
IFT20-216ENST00000588477 RFX7Q2KHR2 1363 aa19.03■□□□□ 0.64
IFT20-216ENST00000588477 GAKO14976 1311 aa19.02■□□□□ 0.64
IFT20-216ENST00000588477 DZIP1Q86YF9 867 aaKnown RBP19.02■□□□□ 0.64
IFT20-216ENST00000588477 C7orf61Q8IZ16 206 aa19.02■□□□□ 0.64
IFT20-216ENST00000588477 ZGPATQ8N5A5 531 aaKnown RBP19.02■□□□□ 0.64
IFT20-216ENST00000588477 ABCF2Q9UG63 623 aa19.02■□□□□ 0.64
IFT20-216ENST00000588477 FBXO3Q9UK99 471 aa19.02■□□□□ 0.64
IFT20-216ENST00000588477 ANP32CO43423 234 aa19.01■□□□□ 0.63
IFT20-216ENST00000588477 CIAO1O76071 339 aa19.01■□□□□ 0.63
IFT20-216ENST00000588477 BMP8BP34820 402 aa19.01■□□□□ 0.63
IFT20-216ENST00000588477 BTDP43251 543 aa19.01■□□□□ 0.63
IFT20-216ENST00000588477 FAM110CQ1W6H9 321 aa19.01■□□□□ 0.63
IFT20-216ENST00000588477 SSH1Q8WYL5 1049 aa19.01■□□□□ 0.63
IFT20-216ENST00000588477 GDF15Q99988 308 aa19.01■□□□□ 0.63
IFT20-216ENST00000588477 PNMA3Q9UL41 463 aa19.01■□□□□ 0.63
IFT20-216ENST00000588477 ZMYND8Q9ULU4 1186 aaPredicted RBP19.01■□□□□ 0.63
IFT20-216ENST00000588477 ADORA1P30542 326 aa19■□□□□ 0.63
IFT20-216ENST00000588477 CCDC102BQ68D86 513 aa19■□□□□ 0.63
IFT20-216ENST00000588477 SLF2Q8IX21 1173 aa19■□□□□ 0.63
IFT20-216ENST00000588477 ANKLE1Q8NAG6 615 aa19■□□□□ 0.63
IFT20-216ENST00000588477 FAM196BA6NMK8 535 aa18.99■□□□□ 0.63
IFT20-216ENST00000588477 HMGCRP04035 888 aa18.99■□□□□ 0.63
IFT20-216ENST00000588477 PROCA1Q8NCQ7 364 aaPredicted RBP18.99■□□□□ 0.63
IFT20-216ENST00000588477 FAM163AQ96GL9 167 aaPredicted RBP18.99■□□□□ 0.63
IFT20-216ENST00000588477 UBTFL1P0CB47 393 aaPredicted RBP18.98■□□□□ 0.63
IFT20-216ENST00000588477 SYN1P17600 705 aa18.98■□□□□ 0.63
IFT20-216ENST00000588477 IL15P40933 162 aaPredicted RBP18.98■□□□□ 0.63
IFT20-216ENST00000588477 TRIM32Q13049 653 aa18.98■□□□□ 0.63
IFT20-216ENST00000588477 SPP2Q13103 211 aa18.98■□□□□ 0.63
IFT20-216ENST00000588477 RASGRF1Q13972 1273 aa18.98■□□□□ 0.63
IFT20-216ENST00000588477 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.98■□□□□ 0.63
IFT20-216ENST00000588477 HMX1Q9NP08 348 aaPredicted RBP18.98■□□□□ 0.63
IFT20-216ENST00000588477 PA2G4Q9UQ80 394 aaKnown RBP18.98■□□□□ 0.63
IFT20-216ENST00000588477 MROH7-TTC4A0A0A0MT08 1334 aa18.98■□□□□ 0.63
IFT20-216ENST00000588477 RPTORQ8N122 1335 aa18.98■□□□□ 0.63
IFT20-216ENST00000588477 ZNF521Q96K83 1311 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms