RNA–Protein interactions for RNA: ENST00000585031.2

TOP3A-220, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-220ENST00000585031 PHF20L1A8MW92 1017 aa22.81■■□□□ 1.24
TOP3A-220ENST00000585031 CXCL11O14625 94 aa22.81■■□□□ 1.24
TOP3A-220ENST00000585031 FGFR2P21802 821 aa22.81■■□□□ 1.24
TOP3A-220ENST00000585031 IRF5Q13568 498 aa22.81■■□□□ 1.24
TOP3A-220ENST00000585031 SLC4A10Q6U841 1118 aa22.81■■□□□ 1.24
TOP3A-220ENST00000585031 SUGT1Q9Y2Z0 365 aa22.81■■□□□ 1.24
TOP3A-220ENST00000585031 VCANP13611 3396 aa22.8■■□□□ 1.24
TOP3A-220ENST00000585031 RABL6Q3YEC7 729 aaPredicted RBP22.8■■□□□ 1.24
TOP3A-220ENST00000585031 SRCIN1Q9C0H9 1055 aa22.8■■□□□ 1.24
TOP3A-220ENST00000585031 DOCK2Q92608 1830 aa22.8■■□□□ 1.24
TOP3A-220ENST00000585031 UTYO14607 1347 aa22.8■■□□□ 1.24
TOP3A-220ENST00000585031 A0A0G2JLL6 359 aaPredicted RBP22.79■■□□□ 1.24
TOP3A-220ENST00000585031 NECAB2Q7Z6G3 386 aa22.79■■□□□ 1.24
TOP3A-220ENST00000585031 PRRT2Q7Z6L0 340 aaPredicted RBP22.79■■□□□ 1.24
TOP3A-220ENST00000585031 SALL2Q9Y467 1007 aaPredicted RBP22.79■■□□□ 1.24
TOP3A-220ENST00000585031 MAST3O60307 1309 aa22.79■■□□□ 1.24
TOP3A-220ENST00000585031 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.78■■□□□ 1.24
TOP3A-220ENST00000585031 AFG3L2Q9Y4W6 797 aa22.78■■□□□ 1.24
TOP3A-220ENST00000585031 ZHX2Q9Y6X8 837 aa22.78■■□□□ 1.24
TOP3A-220ENST00000585031 EYSQ5T1H1 3165 aa22.77■■□□□ 1.24
TOP3A-220ENST00000585031 ZMYND8Q9ULU4 1186 aaPredicted RBP22.77■■□□□ 1.24
TOP3A-220ENST00000585031 PTPRAP18433 802 aa22.76■■□□□ 1.23
TOP3A-220ENST00000585031 PRDX5P30044 214 aa22.76■■□□□ 1.23
TOP3A-220ENST00000585031 GADL1Q6ZQY3 521 aa22.76■■□□□ 1.23
TOP3A-220ENST00000585031 SH3BP5LQ7L8J4 393 aa22.76■■□□□ 1.23
TOP3A-220ENST00000585031 DNAH12Q6ZR08 3092 aa22.76■■□□□ 1.23
TOP3A-220ENST00000585031 MYH2Q9UKX2 1941 aa22.75■■□□□ 1.23
TOP3A-220ENST00000585031 CCDC84Q86UT8 332 aaPredicted RBP22.75■■□□□ 1.23
TOP3A-220ENST00000585031 C7orf61Q8IZ16 206 aa22.75■■□□□ 1.23
TOP3A-220ENST00000585031 USP40Q9NVE5 1235 aa22.75■■□□□ 1.23
TOP3A-220ENST00000585031 PLXNB2O15031 1838 aa22.74■■□□□ 1.23
TOP3A-220ENST00000585031 TNPO2O14787 897 aaKnown RBP22.74■■□□□ 1.23
TOP3A-220ENST00000585031 NCBP3Q53F19 620 aaKnown RBP22.74■■□□□ 1.23
TOP3A-220ENST00000585031 FASTKD5Q7L8L6 764 aaKnown RBP22.74■■□□□ 1.23
TOP3A-220ENST00000585031 SCYL3Q8IZE3 742 aa22.74■■□□□ 1.23
TOP3A-220ENST00000585031 TDHQ8IZJ6 230 aa22.74■■□□□ 1.23
TOP3A-220ENST00000585031 ANKLE1Q8NAG6 615 aa22.74■■□□□ 1.23
TOP3A-220ENST00000585031 DOCK1Q14185 1865 aa22.74■■□□□ 1.23
TOP3A-220ENST00000585031 KIF16BQ96L93 1317 aa22.74■■□□□ 1.23
TOP3A-220ENST00000585031 DDX60LQ5H9U9 1706 aaKnown RBP22.74■■□□□ 1.23
TOP3A-220ENST00000585031 TRIM32Q13049 653 aa22.73■■□□□ 1.23
TOP3A-220ENST00000585031 WDR63Q8IWG1 891 aa22.73■■□□□ 1.23
TOP3A-220ENST00000585031 WDR66Q8TBY9 1149 aa22.73■■□□□ 1.23
TOP3A-220ENST00000585031 TAOK2Q9UL54 1235 aa22.73■■□□□ 1.23
TOP3A-220ENST00000585031 SLC45A1Q9Y2W3 748 aa22.73■■□□□ 1.23
TOP3A-220ENST00000585031 SYN1P17600 705 aa22.72■■□□□ 1.23
TOP3A-220ENST00000585031 MAGEA10P43363 369 aaPredicted RBP22.72■■□□□ 1.23
TOP3A-220ENST00000585031 PUM3Q15397 648 aaKnown RBP22.72■■□□□ 1.23
TOP3A-220ENST00000585031 PHF6Q8IWS0 365 aaKnown RBP eCLIP22.72■■□□□ 1.23
TOP3A-220ENST00000585031 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.72■■□□□ 1.23
TOP3A-220ENST00000585031 SPTBN5Q9NRC6 3674 aaKnown RBP22.71■■□□□ 1.23
TOP3A-220ENST00000585031 IFIT1P09914 478 aaKnown RBP22.71■■□□□ 1.23
TOP3A-220ENST00000585031 RFX5P48382 616 aaPredicted RBP22.71■■□□□ 1.23
TOP3A-220ENST00000585031 RGS3P49796 1198 aa22.71■■□□□ 1.23
TOP3A-220ENST00000585031 MAP3K10Q02779 954 aa22.71■■□□□ 1.23
TOP3A-220ENST00000585031 TREML2Q5T2D2 321 aa22.71■■□□□ 1.23
TOP3A-220ENST00000585031 ANKRD13CQ8N6S4 541 aa22.71■■□□□ 1.23
TOP3A-220ENST00000585031 DDTLA6NHG4 134 aaPredicted RBP22.7■■□□□ 1.22
TOP3A-220ENST00000585031 RFX7Q2KHR2 1363 aa22.69■■□□□ 1.22
TOP3A-220ENST00000585031 TRIM75PA6NK02 468 aa22.69■■□□□ 1.22
TOP3A-220ENST00000585031 ATG9AQ7Z3C6 839 aa22.69■■□□□ 1.22
TOP3A-220ENST00000585031 NBPF3Q9H094 633 aa22.69■■□□□ 1.22
TOP3A-220ENST00000585031 DDX4Q9NQI0 724 aaKnown RBP22.69■■□□□ 1.22
TOP3A-220ENST00000585031 PICK1Q9NRD5 415 aa22.69■■□□□ 1.22
TOP3A-220ENST00000585031 GJD2Q9UKL4 321 aa22.69■■□□□ 1.22
TOP3A-220ENST00000585031 POTEB2H3BUK9 544 aa22.68■■□□□ 1.22
TOP3A-220ENST00000585031 SMCR8Q8TEV9 937 aaPredicted RBP22.68■■□□□ 1.22
TOP3A-220ENST00000585031 IDI2Q9BXS1 227 aa22.68■■□□□ 1.22
TOP3A-220ENST00000585031 PRUNE2Q8WUY3 3088 aa22.68■■□□□ 1.22
TOP3A-220ENST00000585031 FAM109BQ6ICB4 259 aaPredicted RBP22.67■■□□□ 1.22
TOP3A-220ENST00000585031 LPIN2Q92539 896 aa22.67■■□□□ 1.22
TOP3A-220ENST00000585031 COA7Q96BR5 231 aa22.67■■□□□ 1.22
TOP3A-220ENST00000585031 LOC285556D6RIA3 1793 aa22.66■■□□□ 1.22
TOP3A-220ENST00000585031 EYA2O00167 538 aa22.66■■□□□ 1.22
TOP3A-220ENST00000585031 LDHBP07195 334 aaKnown RBP22.66■■□□□ 1.22
TOP3A-220ENST00000585031 SLC5A1P13866 664 aa22.66■■□□□ 1.22
TOP3A-220ENST00000585031 UBE2OQ9C0C9 1292 aaKnown RBP22.66■■□□□ 1.22
TOP3A-220ENST00000585031 USP44Q9H0E7 712 aa22.66■■□□□ 1.22
TOP3A-220ENST00000585031 AGTPBP1Q9UPW5 1226 aa22.66■■□□□ 1.22
TOP3A-220ENST00000585031 RPTORQ8N122 1335 aa22.65■■□□□ 1.22
TOP3A-220ENST00000585031 ENTPD3O75355 529 aa22.65■■□□□ 1.22
TOP3A-220ENST00000585031 ATAD5Q96QE3 1844 aa22.64■■□□□ 1.22
TOP3A-220ENST00000585031 PFASO15067 1338 aa22.64■■□□□ 1.22
TOP3A-220ENST00000585031 CTNND1O60716 968 aaKnown RBP22.64■■□□□ 1.21
TOP3A-220ENST00000585031 HMGCRP04035 888 aa22.64■■□□□ 1.21
TOP3A-220ENST00000585031 FAM110CQ1W6H9 321 aa22.64■■□□□ 1.21
TOP3A-220ENST00000585031 DIEXFQ68CQ4 756 aaKnown RBP22.64■■□□□ 1.21
TOP3A-220ENST00000585031 GUCD1Q96NT3 240 aa22.64■■□□□ 1.21
TOP3A-220ENST00000585031 C11orf49Q9H6J7 331 aa22.64■■□□□ 1.21
TOP3A-220ENST00000585031 OGDHLQ9ULD0 1010 aa22.64■■□□□ 1.21
TOP3A-220ENST00000585031 LRRFIP2Q9Y608 721 aaKnown RBP22.64■■□□□ 1.21
TOP3A-220ENST00000585031 GAKO14976 1311 aa22.63■■□□□ 1.21
TOP3A-220ENST00000585031 SALL1Q9NSC2 1324 aa22.63■■□□□ 1.21
TOP3A-220ENST00000585031 FAM196BA6NMK8 535 aa22.63■■□□□ 1.21
TOP3A-220ENST00000585031 PHKA1P46020 1223 aa22.63■■□□□ 1.21
TOP3A-220ENST00000585031 HMX1Q9NP08 348 aaPredicted RBP22.63■■□□□ 1.21
TOP3A-220ENST00000585031 PEX10O60683 326 aa22.62■■□□□ 1.21
TOP3A-220ENST00000585031 RRP1BQ14684 758 aaKnown RBP22.62■■□□□ 1.21
TOP3A-220ENST00000585031 ZSCAN29Q8IWY8 852 aaPredicted RBP22.62■■□□□ 1.21
TOP3A-220ENST00000585031 MRPL50Q8N5N7 158 aaKnown RBP22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms