RNA–Protein interactions for RNA: ENST00000584966.1

CDH8-213, Transcript of cadherin 8, humanhuman

TSL 2

Gene CDH8, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-213ENST00000584966 ADAMTS19Q8TE59 1207 aa7.23□□□□□ -1.25
CDH8-213ENST00000584966 XAGE3Q8WTP9 111 aa7.23□□□□□ -1.25
CDH8-213ENST00000584966 MTFR1LQ9H019 292 aa7.23□□□□□ -1.25
CDH8-213ENST00000584966 DDX60Q8IY21 1712 aaKnown RBP7.23□□□□□ -1.25
CDH8-213ENST00000584966 TAF1P21675 1872 aa7.23□□□□□ -1.25
CDH8-213ENST00000584966 MAP3K15Q6ZN16 1313 aa7.23□□□□□ -1.25
CDH8-213ENST00000584966 MYH3P11055 1940 aa7.23□□□□□ -1.25
CDH8-213ENST00000584966 ERVV-1B6SEH8 477 aa7.22□□□□□ -1.25
CDH8-213ENST00000584966 CT47B1P0C2W7 299 aaPredicted RBP7.22□□□□□ -1.25
CDH8-213ENST00000584966 GPC1P35052 558 aa7.22□□□□□ -1.25
CDH8-213ENST00000584966 DDR1Q08345 913 aa7.22□□□□□ -1.25
CDH8-213ENST00000584966 WASHC4Q2M389 1173 aa7.22□□□□□ -1.25
CDH8-213ENST00000584966 TBC1D9BQ66K14 1250 aa7.22□□□□□ -1.25
CDH8-213ENST00000584966 CLEC4GQ6UXB4 293 aa7.22□□□□□ -1.25
CDH8-213ENST00000584966 SSH1Q8WYL5 1049 aa7.22□□□□□ -1.25
CDH8-213ENST00000584966 HYPKQ9NX55 129 aa7.22□□□□□ -1.25
CDH8-213ENST00000584966 DLEC1Q9Y238 1755 aa7.22□□□□□ -1.25
CDH8-213ENST00000584966 ZC3H4Q9UPT8 1303 aaKnown RBP7.22□□□□□ -1.25
CDH8-213ENST00000584966 CACNA1SQ13698 1873 aa7.21□□□□□ -1.25
CDH8-213ENST00000584966 ADCY9O60503 1353 aa7.21□□□□□ -1.25
CDH8-213ENST00000584966 HOXB4P17483 251 aaPredicted RBP7.21□□□□□ -1.26
CDH8-213ENST00000584966 RARSP54136 660 aaKnown RBP7.21□□□□□ -1.26
CDH8-213ENST00000584966 AIMP1Q12904 312 aaKnown RBP7.21□□□□□ -1.26
CDH8-213ENST00000584966 NFIXQ14938 502 aa7.21□□□□□ -1.26
CDH8-213ENST00000584966 ALDH1L2Q3SY69 923 aa7.21□□□□□ -1.26
CDH8-213ENST00000584966 MSL1Q68DK7 614 aa7.21□□□□□ -1.26
CDH8-213ENST00000584966 ZNF34Q8IZ26 560 aa7.21□□□□□ -1.26
CDH8-213ENST00000584966 NLGN1Q8N2Q7 840 aa7.21□□□□□ -1.26
CDH8-213ENST00000584966 ZNF428Q96B54 188 aa7.21□□□□□ -1.26
CDH8-213ENST00000584966 KRTAP9-9Q9BYP9 154 aa7.21□□□□□ -1.26
CDH8-213ENST00000584966 KRTAP9-4Q9BYQ2 154 aa7.21□□□□□ -1.26
CDH8-213ENST00000584966 GDF2Q9UK05 429 aaPredicted RBP7.21□□□□□ -1.26
CDH8-213ENST00000584966 ATP10DQ9P241 1426 aa7.2□□□□□ -1.26
CDH8-213ENST00000584966 TNRC6CQ9HCJ0 1690 aaKnown RBP7.2□□□□□ -1.26
CDH8-213ENST00000584966 A0A1W2PRU2 124 aa7.2□□□□□ -1.26
CDH8-213ENST00000584966 POLRMTO00411 1230 aaKnown RBP7.2□□□□□ -1.26
CDH8-213ENST00000584966 GNB5O14775 395 aa7.2□□□□□ -1.26
CDH8-213ENST00000584966 TCIRG1Q13488 830 aa7.2□□□□□ -1.26
CDH8-213ENST00000584966 PLBD2Q8NHP8 589 aa7.2□□□□□ -1.26
CDH8-213ENST00000584966 YTHDC1Q96MU7 727 aaKnown RBP7.2□□□□□ -1.26
CDH8-213ENST00000584966 ISCA1Q9BUE6 129 aa7.2□□□□□ -1.26
CDH8-213ENST00000584966 CFHR5Q9BXR6 569 aa7.2□□□□□ -1.26
CDH8-213ENST00000584966 CHMP4AQ9BY43 222 aa7.2□□□□□ -1.26
CDH8-213ENST00000584966 SPON1Q9HCB6 807 aa7.2□□□□□ -1.26
CDH8-213ENST00000584966 TIMMDC1Q9NPL8 285 aa7.2□□□□□ -1.26
CDH8-213ENST00000584966 COL11A2P13942 1736 aaPredicted RBP7.2□□□□□ -1.26
CDH8-213ENST00000584966 UBN2Q6ZU65 1347 aa7.2□□□□□ -1.26
CDH8-213ENST00000584966 PI4KAP2A4QPH2 592 aa7.19□□□□□ -1.26
CDH8-213ENST00000584966 ESPNB1AK53 854 aa7.19□□□□□ -1.26
CDH8-213ENST00000584966 BCAR3O75815 825 aa7.19□□□□□ -1.26
CDH8-213ENST00000584966 F11P03951 625 aa7.19□□□□□ -1.26
CDH8-213ENST00000584966 MMP10P09238 476 aa7.19□□□□□ -1.26
CDH8-213ENST00000584966 TRIM28Q13263 835 aaKnown RBP7.19□□□□□ -1.26
CDH8-213ENST00000584966 KSR2Q6VAB6 950 aa7.19□□□□□ -1.26
CDH8-213ENST00000584966 KIF6Q6ZMV9 814 aa7.19□□□□□ -1.26
CDH8-213ENST00000584966 GOLGA6L1Q8N7Z2 621 aa7.19□□□□□ -1.26
CDH8-213ENST00000584966 PI4KAP1Q8N8J0 262 aa7.19□□□□□ -1.26
CDH8-213ENST00000584966 BCL2L13Q9BXK5 485 aa7.19□□□□□ -1.26
CDH8-213ENST00000584966 STK31Q9BXU1 1019 aa7.19□□□□□ -1.26
CDH8-213ENST00000584966 GPSM3Q9Y4H4 160 aa7.19□□□□□ -1.26
CDH8-213ENST00000584966 ARFGEF1Q9Y6D6 1849 aa7.18□□□□□ -1.26
CDH8-213ENST00000584966 CCDC88AQ3V6T2 1871 aa7.18□□□□□ -1.26
CDH8-213ENST00000584966 SERPINB2P05120 415 aa7.18□□□□□ -1.26
CDH8-213ENST00000584966 IGKV5-2P06315 115 aa7.18□□□□□ -1.26
CDH8-213ENST00000584966 THBS1P07996 1170 aa7.18□□□□□ -1.26
CDH8-213ENST00000584966 VAC14Q08AM6 782 aa7.18□□□□□ -1.26
CDH8-213ENST00000584966 SUSD4Q5VX71 490 aa7.18□□□□□ -1.26
CDH8-213ENST00000584966 NLRP10Q86W26 655 aa7.18□□□□□ -1.26
CDH8-213ENST00000584966 EPS8L1Q8TE68 723 aa7.18□□□□□ -1.26
CDH8-213ENST00000584966 NLRP3Q96P20 1036 aa7.18□□□□□ -1.26
CDH8-213ENST00000584966 METTL22Q9BUU2 404 aaPredicted RBP7.18□□□□□ -1.26
CDH8-213ENST00000584966 ALG2Q9H553 416 aa7.18□□□□□ -1.26
CDH8-213ENST00000584966 PHF24Q9UPV7 400 aa7.18□□□□□ -1.26
CDH8-213ENST00000584966 NIP7Q9Y221 180 aaKnown RBP eCLIP7.18□□□□□ -1.26
CDH8-213ENST00000584966 MAP3K2Q9Y2U5 619 aa7.18□□□□□ -1.26
CDH8-213ENST00000584966 CARMIL3Q8ND23 1372 aa7.18□□□□□ -1.26
CDH8-213ENST00000584966 C10orf71Q711Q0 1435 aa7.18□□□□□ -1.26
CDH8-213ENST00000584966 SLX4Q8IY92 1834 aa7.17□□□□□ -1.26
CDH8-213ENST00000584966 F6X3S4 739 aa7.17□□□□□ -1.26
CDH8-213ENST00000584966 PIK3R2O00459 728 aa7.17□□□□□ -1.26
CDH8-213ENST00000584966 NTSR2O95665 410 aa7.17□□□□□ -1.26
CDH8-213ENST00000584966 GPTP24298 496 aa7.17□□□□□ -1.26
CDH8-213ENST00000584966 FOXD4L6Q3SYB3 417 aaPredicted RBP7.17□□□□□ -1.26
CDH8-213ENST00000584966 BEND3Q5T5X7 828 aa7.17□□□□□ -1.26
CDH8-213ENST00000584966 PRR5LQ6MZQ0 368 aa7.17□□□□□ -1.26
CDH8-213ENST00000584966 FOXD4L3Q6VB84 417 aaPredicted RBP7.17□□□□□ -1.26
CDH8-213ENST00000584966 BICDL1Q6ZP65 573 aa7.17□□□□□ -1.26
CDH8-213ENST00000584966 SYNE4Q8N205 404 aa7.17□□□□□ -1.26
CDH8-213ENST00000584966 PBXIP1Q96AQ6 731 aa7.17□□□□□ -1.26
CDH8-213ENST00000584966 SETDB2Q96T68 719 aa7.17□□□□□ -1.26
CDH8-213ENST00000584966 GRIP2Q9C0E4 1043 aa7.17□□□□□ -1.26
CDH8-213ENST00000584966 GPAMQ9HCL2 828 aa7.17□□□□□ -1.26
CDH8-213ENST00000584966 NOB1Q9ULX3 412 aaKnown RBP7.17□□□□□ -1.26
CDH8-213ENST00000584966 TNNQ9UQP3 1299 aa7.17□□□□□ -1.26
CDH8-213ENST00000584966 ZNF652Q9Y2D9 606 aa7.17□□□□□ -1.26
CDH8-213ENST00000584966 SPEF2Q9C093 1822 aa7.17□□□□□ -1.26
CDH8-213ENST00000584966 SBF1O95248 1867 aa7.17□□□□□ -1.26
CDH8-213ENST00000584966 COL4A1P02462 1669 aa7.16□□□□□ -1.26
CDH8-213ENST00000584966 KLRG2A4D1S0 409 aaPredicted RBP7.16□□□□□ -1.26
CDH8-213ENST00000584966 NEURL1BA8MQ27 555 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms