RNA–Protein interactions for RNA: ENST00000584755.1

UBBP4-202, Transcript of ubiquitin B pseudogene 4, humanhuman

TSL 1 (best) BASIC

Gene UBBP4, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-202ENST00000584755 MFSD6Q6ZSS7 791 aa16.54■□□□□ 0.24
UBBP4-202ENST00000584755 LARP6Q9BRS8 491 aaKnown RBP16.54■□□□□ 0.24
UBBP4-202ENST00000584755 KRT23Q9C075 422 aa16.54■□□□□ 0.24
UBBP4-202ENST00000584755 TAOK3Q9H2K8 898 aa16.54■□□□□ 0.24
UBBP4-202ENST00000584755 ROBO3Q96MS0 1386 aa16.53■□□□□ 0.24
UBBP4-202ENST00000584755 MYO3BQ8WXR4 1341 aa16.53■□□□□ 0.24
UBBP4-202ENST00000584755 PRC1O43663 620 aa16.53■□□□□ 0.24
UBBP4-202ENST00000584755 ST3GAL1Q11201 340 aa16.53■□□□□ 0.24
UBBP4-202ENST00000584755 KLHL34Q8N239 644 aa16.53■□□□□ 0.24
UBBP4-202ENST00000584755 NLGN2Q8NFZ4 835 aa16.53■□□□□ 0.24
UBBP4-202ENST00000584755 NKX2-3Q8TAU0 364 aa16.53■□□□□ 0.24
UBBP4-202ENST00000584755 TEKT1Q969V4 418 aa16.53■□□□□ 0.24
UBBP4-202ENST00000584755 ZDHHC15Q96MV8 337 aa16.53■□□□□ 0.24
UBBP4-202ENST00000584755 MTA3Q9BTC8 594 aa16.53■□□□□ 0.24
UBBP4-202ENST00000584755 FOXD4L1Q9NU39 408 aa16.53■□□□□ 0.24
UBBP4-202ENST00000584755 ADAMTSL1Q8N6G6 1762 aa16.52■□□□□ 0.24
UBBP4-202ENST00000584755 MINDY4BA8MYZ0 360 aa16.52■□□□□ 0.23
UBBP4-202ENST00000584755 B4E1Z4 1266 aa16.52■□□□□ 0.23
UBBP4-202ENST00000584755 VIL1P09327 827 aaKnown RBP16.52■□□□□ 0.23
UBBP4-202ENST00000584755 USP5P45974 858 aa16.52■□□□□ 0.23
UBBP4-202ENST00000584755 C12orf60Q5U649 245 aa16.52■□□□□ 0.23
UBBP4-202ENST00000584755 APOBEC3HQ6NTF7 200 aaKnown RBP16.52■□□□□ 0.23
UBBP4-202ENST00000584755 CYB5R4Q7L1T6 521 aa16.52■□□□□ 0.23
UBBP4-202ENST00000584755 TEX11Q8IYF3 940 aa16.52■□□□□ 0.23
UBBP4-202ENST00000584755 BRF1Q92994 677 aa16.52■□□□□ 0.23
UBBP4-202ENST00000584755 LRRC2Q9BYS8 371 aa16.52■□□□□ 0.23
UBBP4-202ENST00000584755 SERPINA10Q9UK55 444 aa16.52■□□□□ 0.23
UBBP4-202ENST00000584755 ZNRF3Q9ULT6 936 aa16.52■□□□□ 0.23
UBBP4-202ENST00000584755 BCS1LQ9Y276 419 aa16.52■□□□□ 0.23
UBBP4-202ENST00000584755 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.52■□□□□ 0.23
UBBP4-202ENST00000584755 CYP2D7A0A087X1C5 515 aa16.51■□□□□ 0.23
UBBP4-202ENST00000584755 F8W031 263 aaPredicted RBP16.51■□□□□ 0.23
UBBP4-202ENST00000584755 CRKP46108 304 aa16.51■□□□□ 0.23
UBBP4-202ENST00000584755 NT5C2P49902 561 aa16.51■□□□□ 0.23
UBBP4-202ENST00000584755 RSBN1LQ6PCB5 846 aaPredicted RBP16.51■□□□□ 0.23
UBBP4-202ENST00000584755 TGFBRAP1Q8WUH2 860 aa16.51■□□□□ 0.23
UBBP4-202ENST00000584755 TMEM87BQ96K49 555 aa16.51■□□□□ 0.23
UBBP4-202ENST00000584755 GMLQ99445 158 aa16.51■□□□□ 0.23
UBBP4-202ENST00000584755 INCENPQ9NQS7 918 aa16.51■□□□□ 0.23
UBBP4-202ENST00000584755 FLT1P17948 1338 aa16.5■□□□□ 0.23
UBBP4-202ENST00000584755 SMIM22K7EJ46 135 aa16.5■□□□□ 0.23
UBBP4-202ENST00000584755 ORC4O43929 436 aa16.5■□□□□ 0.23
UBBP4-202ENST00000584755 SCNN1DP51172 638 aa16.5■□□□□ 0.23
UBBP4-202ENST00000584755 CHST3Q7LGC8 479 aa16.5■□□□□ 0.23
UBBP4-202ENST00000584755 KIAA0825Q8IV33 1275 aa16.5■□□□□ 0.23
UBBP4-202ENST00000584755 NIM1KQ8IY84 436 aa16.5■□□□□ 0.23
UBBP4-202ENST00000584755 ZNF274Q96GC6 653 aaPredicted RBP16.5■□□□□ 0.23
UBBP4-202ENST00000584755 MCM9Q9NXL9 1143 aa16.5■□□□□ 0.23
UBBP4-202ENST00000584755 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.5■□□□□ 0.23
UBBP4-202ENST00000584755 SH2B2O14492 632 aaPredicted RBP16.49■□□□□ 0.23
UBBP4-202ENST00000584755 PFKFB2O60825 505 aa16.49■□□□□ 0.23
UBBP4-202ENST00000584755 KDM4AO75164 1064 aa16.49■□□□□ 0.23
UBBP4-202ENST00000584755 USP17L8P0C7I0 530 aa16.49■□□□□ 0.23
UBBP4-202ENST00000584755 FGD1P98174 961 aa16.49■□□□□ 0.23
UBBP4-202ENST00000584755 IGDCC4Q8TDY8 1250 aa16.49■□□□□ 0.23
UBBP4-202ENST00000584755 ZSWIM5Q9P217 1185 aa16.49■□□□□ 0.23
UBBP4-202ENST00000584755 ECM29Q5VYK3 1845 aa16.49■□□□□ 0.23
UBBP4-202ENST00000584755 PSMD14O00487 310 aa16.48■□□□□ 0.23
UBBP4-202ENST00000584755 WDHD1O75717 1129 aaPredicted RBP16.48■□□□□ 0.23
UBBP4-202ENST00000584755 SLC3A2P08195 630 aaKnown RBP16.48■□□□□ 0.23
UBBP4-202ENST00000584755 CYP2D6P10635 497 aa16.48■□□□□ 0.23
UBBP4-202ENST00000584755 APOBRQ0VD83 1088 aa16.48■□□□□ 0.23
UBBP4-202ENST00000584755 CDC42EP5Q6NZY7 148 aa16.48■□□□□ 0.23
UBBP4-202ENST00000584755 SGMS1Q86VZ5 419 aa16.48■□□□□ 0.23
UBBP4-202ENST00000584755 MAPKAPK5Q8IW41 473 aa16.48■□□□□ 0.23
UBBP4-202ENST00000584755 CCDC83Q8IWF9 413 aa16.48■□□□□ 0.23
UBBP4-202ENST00000584755 GTF3C6Q969F1 213 aa16.48■□□□□ 0.23
UBBP4-202ENST00000584755 GPHNQ9NQX3 736 aaPredicted RBP16.48■□□□□ 0.23
UBBP4-202ENST00000584755 ANGEL1Q9UNK9 670 aaKnown RBP16.48■□□□□ 0.23
UBBP4-202ENST00000584755 GOLGB1Q14789 3259 aaKnown RBP16.48■□□□□ 0.23
UBBP4-202ENST00000584755 RAD17O75943 681 aa16.48■□□□□ 0.23
UBBP4-202ENST00000584755 LIFRP42702 1097 aa16.48■□□□□ 0.23
UBBP4-202ENST00000584755 EVX2Q03828 476 aa16.48■□□□□ 0.23
UBBP4-202ENST00000584755 NECAB1Q8N987 351 aa16.48■□□□□ 0.23
UBBP4-202ENST00000584755 ESR2Q92731 530 aa16.48■□□□□ 0.23
UBBP4-202ENST00000584755 USP40Q9NVE5 1235 aa16.48■□□□□ 0.23
UBBP4-202ENST00000584755 MYH1P12882 1939 aa16.47■□□□□ 0.23
UBBP4-202ENST00000584755 NPM3O75607 178 aaKnown RBP16.47■□□□□ 0.23
UBBP4-202ENST00000584755 PDIA3P30101 505 aaKnown RBP16.47■□□□□ 0.23
UBBP4-202ENST00000584755 NUCB2P80303 420 aa16.47■□□□□ 0.23
UBBP4-202ENST00000584755 RAB3GAP1Q15042 981 aa16.47■□□□□ 0.23
UBBP4-202ENST00000584755 AMOTL1Q8IY63 956 aa16.47■□□□□ 0.23
UBBP4-202ENST00000584755 AGBL3Q8NEM8 1001 aa16.47■□□□□ 0.23
UBBP4-202ENST00000584755 JDP2Q8WYK2 163 aa16.47■□□□□ 0.23
UBBP4-202ENST00000584755 FHDC1Q9C0D6 1143 aaPredicted RBP16.47■□□□□ 0.23
UBBP4-202ENST00000584755 LY9Q9HBG7 655 aa16.47■□□□□ 0.23
UBBP4-202ENST00000584755 PRELPP51888 382 aa16.46■□□□□ 0.23
UBBP4-202ENST00000584755 CXCL9Q07325 125 aa16.46■□□□□ 0.23
UBBP4-202ENST00000584755 PDE4BQ07343 736 aa16.46■□□□□ 0.23
UBBP4-202ENST00000584755 RRP12Q5JTH9 1297 aaKnown RBP16.46■□□□□ 0.23
UBBP4-202ENST00000584755 BRPF3Q9ULD4 1205 aa16.46■□□□□ 0.23
UBBP4-202ENST00000584755 POLR3DP05423 398 aaPredicted RBP16.45■□□□□ 0.22
UBBP4-202ENST00000584755 PLCD1P51178 756 aa16.45■□□□□ 0.22
UBBP4-202ENST00000584755 SCRN1Q12765 414 aa16.45■□□□□ 0.22
UBBP4-202ENST00000584755 CHMP4CQ96CF2 233 aa16.45■□□□□ 0.22
UBBP4-202ENST00000584755 LLPHQ9BRT6 129 aaKnown RBP16.45■□□□□ 0.22
UBBP4-202ENST00000584755 IDI2Q9BXS1 227 aa16.45■□□□□ 0.22
UBBP4-202ENST00000584755 DDX4Q9NQI0 724 aaKnown RBP16.45■□□□□ 0.22
UBBP4-202ENST00000584755 TOMM22Q9NS69 142 aa16.45■□□□□ 0.22
UBBP4-202ENST00000584755 HPS5Q9UPZ3 1129 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms