RNA–Protein interactions for RNA: ENST00000584541.1

RFFL-211, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-211ENST00000584541 TCP10L2B9ZVM9 353 aa21.86■■□□□ 1.09
RFFL-211ENST00000584541 EPB41L2O43491 1005 aaKnown RBP21.86■■□□□ 1.09
RFFL-211ENST00000584541 ENTPD3O75355 529 aa21.86■■□□□ 1.09
RFFL-211ENST00000584541 PTH1RQ03431 593 aa21.86■■□□□ 1.09
RFFL-211ENST00000584541 ANGEL2Q5VTE6 544 aaKnown RBP21.86■■□□□ 1.09
RFFL-211ENST00000584541 ZC3H15Q8WU90 426 aaKnown RBP21.86■■□□□ 1.09
RFFL-211ENST00000584541 BACH2Q9BYV9 841 aa21.86■■□□□ 1.09
RFFL-211ENST00000584541 LSG1Q9H089 658 aaKnown RBP21.86■■□□□ 1.09
RFFL-211ENST00000584541 DCP1AQ9NPI6 582 aaPredicted RBP21.86■■□□□ 1.09
RFFL-211ENST00000584541 GGA3Q9NZ52 723 aa21.86■■□□□ 1.09
RFFL-211ENST00000584541 U3KPZ7 1027 aaPredicted RBP21.86■■□□□ 1.09
RFFL-211ENST00000584541 ZMYM6O95789 1325 aa21.85■■□□□ 1.09
RFFL-211ENST00000584541 PITPNM2Q9BZ72 1349 aa21.85■■□□□ 1.09
RFFL-211ENST00000584541 NFIAQ12857 509 aa21.85■■□□□ 1.09
RFFL-211ENST00000584541 ALX1Q15699 326 aa21.85■■□□□ 1.09
RFFL-211ENST00000584541 FAM83AQ86UY5 434 aa21.85■■□□□ 1.09
RFFL-211ENST00000584541 MAP4K1Q92918 833 aa21.85■■□□□ 1.09
RFFL-211ENST00000584541 DCPSQ96C86 337 aaKnown RBP21.85■■□□□ 1.09
RFFL-211ENST00000584541 UPF2Q9HAU5 1272 aaKnown RBP21.85■■□□□ 1.09
RFFL-211ENST00000584541 MCM9Q9NXL9 1143 aa21.85■■□□□ 1.09
RFFL-211ENST00000584541 DDX60LQ5H9U9 1706 aaKnown RBP21.85■■□□□ 1.09
RFFL-211ENST00000584541 LAMA4Q16363 1823 aa21.85■■□□□ 1.09
RFFL-211ENST00000584541 TCP10Q12799 353 aa21.84■■□□□ 1.09
RFFL-211ENST00000584541 OSBPL5Q9H0X9 879 aaPredicted RBP21.84■■□□□ 1.09
RFFL-211ENST00000584541 EPB41L4AQ9HCS5 686 aaPredicted RBP21.84■■□□□ 1.09
RFFL-211ENST00000584541 NMRK2Q9NPI5 230 aa21.84■■□□□ 1.09
RFFL-211ENST00000584541 DDX4Q9NQI0 724 aaKnown RBP21.84■■□□□ 1.09
RFFL-211ENST00000584541 ARPP21Q9UBL0 812 aaPredicted RBP21.84■■□□□ 1.09
RFFL-211ENST00000584541 CLEC11AQ9Y240 323 aa21.84■■□□□ 1.09
RFFL-211ENST00000584541 ASTN2O75129 1339 aaPredicted RBP21.83■■□□□ 1.09
RFFL-211ENST00000584541 FOXP2O15409 715 aa21.83■■□□□ 1.09
RFFL-211ENST00000584541 FGAP02671 866 aa21.83■■□□□ 1.09
RFFL-211ENST00000584541 POLR3DP05423 398 aaPredicted RBP21.83■■□□□ 1.09
RFFL-211ENST00000584541 ZSCAN29Q8IWY8 852 aaPredicted RBP21.83■■□□□ 1.09
RFFL-211ENST00000584541 FAM151AQ8WW52 585 aa21.83■■□□□ 1.09
RFFL-211ENST00000584541 GPBP1L1Q9HC44 474 aaPredicted RBP21.83■■□□□ 1.09
RFFL-211ENST00000584541 FAM198AQ9UFP1 575 aa21.83■■□□□ 1.09
RFFL-211ENST00000584541 MKRN1Q9UHC7 482 aaKnown RBP21.83■■□□□ 1.09
RFFL-211ENST00000584541 SEC24BO95487 1268 aa21.82■■□□□ 1.08
RFFL-211ENST00000584541 MCCP23508 829 aa21.82■■□□□ 1.08
RFFL-211ENST00000584541 DHX36Q9H2U1 1008 aaKnown RBP21.82■■□□□ 1.08
RFFL-211ENST00000584541 SAP30BPQ9UHR5 308 aaKnown RBP21.82■■□□□ 1.08
RFFL-211ENST00000584541 RBM8AQ9Y5S9 174 aaKnown RBP21.82■■□□□ 1.08
RFFL-211ENST00000584541 COL2A1P02458 1487 aaPredicted RBP21.82■■□□□ 1.08
RFFL-211ENST00000584541 USP17L12C9JPN9 530 aa21.81■■□□□ 1.08
RFFL-211ENST00000584541 USP17L21D6R901 530 aa21.81■■□□□ 1.08
RFFL-211ENST00000584541 HLA-DOAP06340 250 aa21.81■■□□□ 1.08
RFFL-211ENST00000584541 IMMTQ16891 758 aaKnown RBP21.81■■□□□ 1.08
RFFL-211ENST00000584541 SBK1Q52WX2 424 aa21.81■■□□□ 1.08
RFFL-211ENST00000584541 RNF20Q5VTR2 975 aa21.81■■□□□ 1.08
RFFL-211ENST00000584541 TTC6Q86TZ1 520 aa21.81■■□□□ 1.08
RFFL-211ENST00000584541 SULF1Q8IWU6 871 aa21.81■■□□□ 1.08
RFFL-211ENST00000584541 USP26Q9BXU7 913 aa21.81■■□□□ 1.08
RFFL-211ENST00000584541 PGAP2Q9UHJ9 254 aa21.81■■□□□ 1.08
RFFL-211ENST00000584541 PPP2R3BQ9Y5P8 575 aa21.81■■□□□ 1.08
RFFL-211ENST00000584541 CNTNAP1P78357 1384 aa21.8■■□□□ 1.08
RFFL-211ENST00000584541 MINDY4BA8MYZ0 360 aa21.8■■□□□ 1.08
RFFL-211ENST00000584541 ZNF213O14771 459 aa21.8■■□□□ 1.08
RFFL-211ENST00000584541 RASA3Q14644 834 aa21.8■■□□□ 1.08
RFFL-211ENST00000584541 CTR9Q6PD62 1173 aa21.8■■□□□ 1.08
RFFL-211ENST00000584541 LDHDQ86WU2 507 aa21.8■■□□□ 1.08
RFFL-211ENST00000584541 DEFB129Q9H1M3 183 aa21.8■■□□□ 1.08
RFFL-211ENST00000584541 PALD1Q9ULE6 856 aa21.8■■□□□ 1.08
RFFL-211ENST00000584541 MYH8P13535 1937 aa21.79■■□□□ 1.08
RFFL-211ENST00000584541 SLC3A2P08195 630 aaKnown RBP21.79■■□□□ 1.08
RFFL-211ENST00000584541 ATRNL1Q5VV63 1379 aa21.78■■□□□ 1.08
RFFL-211ENST00000584541 C12orf60Q5U649 245 aa21.78■■□□□ 1.08
RFFL-211ENST00000584541 ZFPM1Q8IX07 1006 aa21.78■■□□□ 1.08
RFFL-211ENST00000584541 TMEM39BQ9GZU3 492 aa21.78■■□□□ 1.08
RFFL-211ENST00000584541 PPARAQ07869 468 aa21.77■■□□□ 1.08
RFFL-211ENST00000584541 NECTIN1Q15223 517 aa21.77■■□□□ 1.08
RFFL-211ENST00000584541 SLC4A8Q2Y0W8 1093 aa21.77■■□□□ 1.08
RFFL-211ENST00000584541 KRT26Q7Z3Y9 468 aa21.77■■□□□ 1.08
RFFL-211ENST00000584541 ZNF784Q8NCA9 323 aaPredicted RBP21.77■■□□□ 1.08
RFFL-211ENST00000584541 HOOK2Q96ED9 719 aa21.77■■□□□ 1.08
RFFL-211ENST00000584541 CSRNP1Q96S65 589 aa21.77■■□□□ 1.08
RFFL-211ENST00000584541 TRIM34Q9BYJ4 488 aa21.77■■□□□ 1.08
RFFL-211ENST00000584541 PI4KBQ9UBF8 816 aa21.77■■□□□ 1.08
RFFL-211ENST00000584541 SCAF8Q9UPN6 1271 aaKnown RBP21.77■■□□□ 1.08
RFFL-211ENST00000584541 DDTLA6NHG4 134 aaPredicted RBP21.76■■□□□ 1.07
RFFL-211ENST00000584541 CYP2D6P10635 497 aa21.76■■□□□ 1.07
RFFL-211ENST00000584541 ZKSCAN1P17029 563 aaPredicted RBP21.76■■□□□ 1.07
RFFL-211ENST00000584541 HSPA4P34932 840 aa21.76■■□□□ 1.07
RFFL-211ENST00000584541 HAND2P61296 217 aa21.76■■□□□ 1.07
RFFL-211ENST00000584541 CREB3L3Q68CJ9 461 aa21.76■■□□□ 1.07
RFFL-211ENST00000584541 CDC37L1Q7L3B6 337 aa21.76■■□□□ 1.07
RFFL-211ENST00000584541 CYP2D7A0A087X1C5 515 aa21.75■■□□□ 1.07
RFFL-211ENST00000584541 SLC27A2O14975 620 aa21.75■■□□□ 1.07
RFFL-211ENST00000584541 POTEIP0CG38 1075 aa21.75■■□□□ 1.07
RFFL-211ENST00000584541 POTEJP0CG39 1038 aa21.75■■□□□ 1.07
RFFL-211ENST00000584541 CRACR2BQ8N4Y2 399 aaPredicted RBP21.75■■□□□ 1.07
RFFL-211ENST00000584541 ANAPC4Q9UJX5 808 aa21.75■■□□□ 1.07
RFFL-211ENST00000584541 TAOK2Q9UL54 1235 aa21.75■■□□□ 1.07
RFFL-211ENST00000584541 SIPA1L1O43166 1804 aa21.75■■□□□ 1.07
RFFL-211ENST00000584541 CYP21A2P08686 494 aa21.74■■□□□ 1.07
RFFL-211ENST00000584541 PLCD1P51178 756 aa21.74■■□□□ 1.07
RFFL-211ENST00000584541 SUPT20HL1Q3ZLR7 823 aa21.74■■□□□ 1.07
RFFL-211ENST00000584541 SH3BP5LQ7L8J4 393 aa21.74■■□□□ 1.07
RFFL-211ENST00000584541 USP48Q86UV5 1035 aa21.74■■□□□ 1.07
RFFL-211ENST00000584541 FOXP4Q8IVH2 680 aaPredicted RBP21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms