RNA–Protein interactions for RNA: ENST00000583328.5

TOP3A-215, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-215ENST00000583328 SMCR8Q8TEV9 937 aaPredicted RBP15.39■□□□□ 0.05
TOP3A-215ENST00000583328 LPIN2Q92539 896 aa15.39■□□□□ 0.05
TOP3A-215ENST00000583328 PHF20L1A8MW92 1017 aa15.38■□□□□ 0.05
TOP3A-215ENST00000583328 PTPRAP18433 802 aa15.38■□□□□ 0.05
TOP3A-215ENST00000583328 ZSCAN29Q8IWY8 852 aaPredicted RBP15.38■□□□□ 0.05
TOP3A-215ENST00000583328 COA7Q96BR5 231 aa15.38■□□□□ 0.05
TOP3A-215ENST00000583328 PAWRQ96IZ0 340 aaKnown RBP15.38■□□□□ 0.05
TOP3A-215ENST00000583328 MRS2Q9HD23 443 aa15.38■□□□□ 0.05
TOP3A-215ENST00000583328 SLC45A1Q9Y2W3 748 aa15.38■□□□□ 0.05
TOP3A-215ENST00000583328 AFG3L2Q9Y4W6 797 aa15.38■□□□□ 0.05
TOP3A-215ENST00000583328 LRRFIP2Q9Y608 721 aaKnown RBP15.38■□□□□ 0.05
TOP3A-215ENST00000583328 EYA2O00167 538 aa15.37■□□□□ 0.05
TOP3A-215ENST00000583328 NECAB2Q7Z6G3 386 aa15.37■□□□□ 0.05
TOP3A-215ENST00000583328 PAK6Q9NQU5 681 aaPredicted RBP15.37■□□□□ 0.05
TOP3A-215ENST00000583328 GNL3LQ9NVN8 582 aaKnown RBP15.37■□□□□ 0.05
TOP3A-215ENST00000583328 RGS3P49796 1198 aa15.36■□□□□ 0.05
TOP3A-215ENST00000583328 CRISPLD2Q9H0B8 497 aa15.36■□□□□ 0.05
TOP3A-215ENST00000583328 TRIM75PA6NK02 468 aa15.35■□□□□ 0.05
TOP3A-215ENST00000583328 ENTPD3O75355 529 aa15.35■□□□□ 0.05
TOP3A-215ENST00000583328 DIEXFQ68CQ4 756 aaKnown RBP15.35■□□□□ 0.05
TOP3A-215ENST00000583328 ANKRD13CQ8N6S4 541 aa15.35■□□□□ 0.05
TOP3A-215ENST00000583328 IDI2Q9BXS1 227 aa15.35■□□□□ 0.05
TOP3A-215ENST00000583328 CTNND1O60716 968 aaKnown RBP15.34■□□□□ 0.05
TOP3A-215ENST00000583328 BMP8BP34820 402 aa15.34■□□□□ 0.05
TOP3A-215ENST00000583328 RFX5P48382 616 aaPredicted RBP15.34■□□□□ 0.05
TOP3A-215ENST00000583328 ATP2B3Q16720 1220 aa15.34■□□□□ 0.05
TOP3A-215ENST00000583328 C7orf61Q8IZ16 206 aa15.34■□□□□ 0.05
TOP3A-215ENST00000583328 MRPL50Q8N5N7 158 aaKnown RBP15.34■□□□□ 0.05
TOP3A-215ENST00000583328 DIS3LQ8TF46 1054 aaKnown RBP15.34■□□□□ 0.05
TOP3A-215ENST00000583328 GDF15Q99988 308 aa15.34■□□□□ 0.05
TOP3A-215ENST00000583328 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.34■□□□□ 0.05
TOP3A-215ENST00000583328 USP44Q9H0E7 712 aa15.34■□□□□ 0.05
TOP3A-215ENST00000583328 CEP126Q9P2H0 1117 aa15.34■□□□□ 0.05
TOP3A-215ENST00000583328 DENND2AQ9ULE3 1009 aa15.34■□□□□ 0.05
TOP3A-215ENST00000583328 ZMYND8Q9ULU4 1186 aaPredicted RBP15.34■□□□□ 0.05
TOP3A-215ENST00000583328 AGTPBP1Q9UPW5 1226 aa15.34■□□□□ 0.05
TOP3A-215ENST00000583328 RANBP2P49792 3224 aaKnown RBP15.34■□□□□ 0.05
TOP3A-215ENST00000583328 SLURP2P0DP57 97 aa15.33■□□□□ 0.04
TOP3A-215ENST00000583328 MNX1P50219 401 aaPredicted RBP15.33■□□□□ 0.04
TOP3A-215ENST00000583328 MAP3K10Q02779 954 aa15.33■□□□□ 0.04
TOP3A-215ENST00000583328 SH3BP5LQ7L8J4 393 aa15.33■□□□□ 0.04
TOP3A-215ENST00000583328 DEFB123Q8N688 67 aa15.33■□□□□ 0.04
TOP3A-215ENST00000583328 PNMA3Q9UL41 463 aa15.33■□□□□ 0.04
TOP3A-215ENST00000583328 SALL1Q9NSC2 1324 aa15.33■□□□□ 0.04
TOP3A-215ENST00000583328 ATRNL1Q5VV63 1379 aa15.33■□□□□ 0.04
TOP3A-215ENST00000583328 DDTLA6NHG4 134 aaPredicted RBP15.32■□□□□ 0.04
TOP3A-215ENST00000583328 SEMA3EO15041 775 aa15.32■□□□□ 0.04
TOP3A-215ENST00000583328 PICALMQ13492 652 aa15.32■□□□□ 0.04
TOP3A-215ENST00000583328 FAM110CQ1W6H9 321 aa15.32■□□□□ 0.04
TOP3A-215ENST00000583328 GPR153Q6NV75 609 aa15.32■□□□□ 0.04
TOP3A-215ENST00000583328 ATG9AQ7Z3C6 839 aa15.32■□□□□ 0.04
TOP3A-215ENST00000583328 CCDC84Q86UT8 332 aaPredicted RBP15.32■□□□□ 0.04
TOP3A-215ENST00000583328 ZGPATQ8N5A5 531 aaKnown RBP15.32■□□□□ 0.04
TOP3A-215ENST00000583328 ANKLE1Q8NAG6 615 aa15.32■□□□□ 0.04
TOP3A-215ENST00000583328 SIL1Q9H173 461 aa15.32■□□□□ 0.04
TOP3A-215ENST00000583328 AK9Q5TCS8 1911 aa15.32■□□□□ 0.04
TOP3A-215ENST00000583328 HMGCRP04035 888 aa15.31■□□□□ 0.04
TOP3A-215ENST00000583328 PHKA1P46020 1223 aa15.31■□□□□ 0.04
TOP3A-215ENST00000583328 TREML2Q5T2D2 321 aa15.31■□□□□ 0.04
TOP3A-215ENST00000583328 DZIP1Q86YF9 867 aaKnown RBP15.31■□□□□ 0.04
TOP3A-215ENST00000583328 SLF2Q8IX21 1173 aa15.31■□□□□ 0.04
TOP3A-215ENST00000583328 NBPF3Q9H094 633 aa15.31■□□□□ 0.04
TOP3A-215ENST00000583328 HMX1Q9NP08 348 aaPredicted RBP15.31■□□□□ 0.04
TOP3A-215ENST00000583328 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.31■□□□□ 0.04
TOP3A-215ENST00000583328 PTPRCP08575 1304 aa15.31■□□□□ 0.04
TOP3A-215ENST00000583328 GAKO14976 1311 aa15.3■□□□□ 0.04
TOP3A-215ENST00000583328 SYN1P17600 705 aa15.3■□□□□ 0.04
TOP3A-215ENST00000583328 Q7L0L9 218 aa15.3■□□□□ 0.04
TOP3A-215ENST00000583328 RPTORQ8N122 1335 aa15.3■□□□□ 0.04
TOP3A-215ENST00000583328 C11orf49Q9H6J7 331 aa15.3■□□□□ 0.04
TOP3A-215ENST00000583328 DDX4Q9NQI0 724 aaKnown RBP15.3■□□□□ 0.04
TOP3A-215ENST00000583328 ABCF2Q9UG63 623 aa15.3■□□□□ 0.04
TOP3A-215ENST00000583328 FBXO3Q9UK99 471 aa15.3■□□□□ 0.04
TOP3A-215ENST00000583328 CIAO1O76071 339 aa15.29■□□□□ 0.04
TOP3A-215ENST00000583328 BTDP43251 543 aa15.29■□□□□ 0.04
TOP3A-215ENST00000583328 GCLCP48506 637 aaPredicted RBP15.29■□□□□ 0.04
TOP3A-215ENST00000583328 SPP2Q13103 211 aa15.29■□□□□ 0.04
TOP3A-215ENST00000583328 PABPC4Q13310 644 aaKnown RBP eCLIP15.29■□□□□ 0.04
TOP3A-215ENST00000583328 LRIT3Q3SXY7 679 aa15.29■□□□□ 0.04
TOP3A-215ENST00000583328 PROCA1Q8NCQ7 364 aaPredicted RBP15.29■□□□□ 0.04
TOP3A-215ENST00000583328 FAM163AQ96GL9 167 aaPredicted RBP15.29■□□□□ 0.04
TOP3A-215ENST00000583328 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.29■□□□□ 0.04
TOP3A-215ENST00000583328 GJD2Q9UKL4 321 aa15.29■□□□□ 0.04
TOP3A-215ENST00000583328 TBC1D12O60347 775 aa15.28■□□□□ 0.04
TOP3A-215ENST00000583328 MAGEA10P43363 369 aaPredicted RBP15.28■□□□□ 0.04
TOP3A-215ENST00000583328 TRIM32Q13049 653 aa15.28■□□□□ 0.04
TOP3A-215ENST00000583328 SPTY2D1Q68D10 685 aaPredicted RBP15.28■□□□□ 0.04
TOP3A-215ENST00000583328 CCDC102BQ68D86 513 aa15.28■□□□□ 0.04
TOP3A-215ENST00000583328 STXBP5LQ9Y2K9 1186 aa15.28■□□□□ 0.04
TOP3A-215ENST00000583328 ADORA1P30542 326 aa15.27■□□□□ 0.04
TOP3A-215ENST00000583328 IL15P40933 162 aaPredicted RBP15.27■□□□□ 0.04
TOP3A-215ENST00000583328 HMGCS2P54868 508 aa15.27■□□□□ 0.04
TOP3A-215ENST00000583328 TDHQ8IZJ6 230 aa15.27■□□□□ 0.04
TOP3A-215ENST00000583328 ZNF280CQ8ND82 737 aa15.27■□□□□ 0.04
TOP3A-215ENST00000583328 UBE2OQ9C0C9 1292 aaKnown RBP15.27■□□□□ 0.04
TOP3A-215ENST00000583328 OSBPL5Q9H0X9 879 aaPredicted RBP15.27■□□□□ 0.04
TOP3A-215ENST00000583328 MGAMO43451 1857 aa15.27■□□□□ 0.03
TOP3A-215ENST00000583328 FAM196BA6NMK8 535 aa15.26■□□□□ 0.03
TOP3A-215ENST00000583328 UBTFL1P0CB47 393 aaPredicted RBP15.26■□□□□ 0.03
TOP3A-215ENST00000583328 CYP2B6P20813 491 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms