RNA–Protein interactions for RNA: ENST00000583289.5

PTPRM-215, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5

Gene PTPRM, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-215ENST00000583289 CCDC39Q9UFE4 941 aa6.46□□□□□ -1.38
PTPRM-215ENST00000583289 DCTN4Q9UJW0 460 aa6.46□□□□□ -1.38
PTPRM-215ENST00000583289 CTTNBP2Q8WZ74 1663 aa6.45□□□□□ -1.38
PTPRM-215ENST00000583289 FAM170BA6NMN3 283 aa6.45□□□□□ -1.38
PTPRM-215ENST00000583289 SLFN14P0C7P3 912 aa6.45□□□□□ -1.38
PTPRM-215ENST00000583289 TXKP42681 527 aa6.45□□□□□ -1.38
PTPRM-215ENST00000583289 FAAP100Q0VG06 881 aa6.45□□□□□ -1.38
PTPRM-215ENST00000583289 TMC7Q7Z402 723 aa6.45□□□□□ -1.38
PTPRM-215ENST00000583289 SHISA5Q8N114 240 aa6.45□□□□□ -1.38
PTPRM-215ENST00000583289 KRTAP4-12Q9BQ66 201 aa6.45□□□□□ -1.38
PTPRM-215ENST00000583289 ATXN3LQ9H3M9 355 aa6.45□□□□□ -1.38
PTPRM-215ENST00000583289 KRT82Q9NSB4 513 aa6.45□□□□□ -1.38
PTPRM-215ENST00000583289 BIN2Q9UBW5 565 aaPredicted RBP6.45□□□□□ -1.38
PTPRM-215ENST00000583289 DAGLAQ9Y4D2 1042 aa6.45□□□□□ -1.38
PTPRM-215ENST00000583289 WDR97A6NE52 1622 aa6.45□□□□□ -1.38
PTPRM-215ENST00000583289 RAD54L2Q9Y4B4 1467 aa6.45□□□□□ -1.38
PTPRM-215ENST00000583289 URB2Q14146 1524 aaKnown RBP6.45□□□□□ -1.38
PTPRM-215ENST00000583289 DHX57Q6P158 1386 aaKnown RBP6.44□□□□□ -1.38
PTPRM-215ENST00000583289 SETD5Q9C0A6 1442 aa6.44□□□□□ -1.38
PTPRM-215ENST00000583289 NESP48681 1621 aa6.44□□□□□ -1.38
PTPRM-215ENST00000583289 TMPRSS2O15393 492 aa6.44□□□□□ -1.38
PTPRM-215ENST00000583289 GSTP1P09211 210 aaKnown RBP6.44□□□□□ -1.38
PTPRM-215ENST00000583289 FCGRTP55899 365 aa6.44□□□□□ -1.38
PTPRM-215ENST00000583289 SEZ6L2Q6UXD5 910 aa6.44□□□□□ -1.38
PTPRM-215ENST00000583289 ZNF765Q7L2R6 523 aa6.44□□□□□ -1.38
PTPRM-215ENST00000583289 FMNL2Q96PY5 1086 aa6.44□□□□□ -1.38
PTPRM-215ENST00000583289 CCDC86Q9H6F5 360 aaKnown RBP6.44□□□□□ -1.38
PTPRM-215ENST00000583289 PIDD1Q9HB75 910 aa6.44□□□□□ -1.38
PTPRM-215ENST00000583289 TMEM39AQ9NV64 488 aa6.44□□□□□ -1.38
PTPRM-215ENST00000583289 GPN3Q9UHW5 284 aaPredicted RBP6.44□□□□□ -1.38
PTPRM-215ENST00000583289 ABCA5Q8WWZ7 1642 aa6.43□□□□□ -1.38
PTPRM-215ENST00000583289 CFAP43Q8NDM7 1665 aa6.43□□□□□ -1.38
PTPRM-215ENST00000583289 ID3Q02535 119 aa6.43□□□□□ -1.38
PTPRM-215ENST00000583289 GOLGA2P5Q9HBQ8 144 aa6.43□□□□□ -1.38
PTPRM-215ENST00000583289 C1GALT1Q9NS00 363 aa6.43□□□□□ -1.38
PTPRM-215ENST00000583289 CRIM1Q9NZV1 1036 aa6.43□□□□□ -1.38
PTPRM-215ENST00000583289 ADGRE2Q9UHX3 823 aa6.43□□□□□ -1.38
PTPRM-215ENST00000583289 PPP1R9AQ9ULJ8 1098 aa6.43□□□□□ -1.38
PTPRM-215ENST00000583289 THOC2Q8NI27 1593 aaKnown RBP6.43□□□□□ -1.38
PTPRM-215ENST00000583289 LIG1P18858 919 aa6.42□□□□□ -1.38
PTPRM-215ENST00000583289 MAPK1P28482 360 aa6.42□□□□□ -1.38
PTPRM-215ENST00000583289 ZNF157P51786 506 aaPredicted RBP6.42□□□□□ -1.38
PTPRM-215ENST00000583289 KIF4BQ2VIQ3 1234 aa6.42□□□□□ -1.38
PTPRM-215ENST00000583289 CYP27C1Q4G0S4 372 aa6.42□□□□□ -1.38
PTPRM-215ENST00000583289 OGFOD3Q6PK18 319 aa6.42□□□□□ -1.38
PTPRM-215ENST00000583289 TP53INP2Q8IXH6 220 aa6.42□□□□□ -1.38
PTPRM-215ENST00000583289 ABI1Q8IZP0 508 aa6.42□□□□□ -1.38
PTPRM-215ENST00000583289 FANCD2OSQ96PS1 177 aa6.42□□□□□ -1.38
PTPRM-215ENST00000583289 BCO2Q9BYV7 579 aa6.42□□□□□ -1.38
PTPRM-215ENST00000583289 LRRC4CQ9HCJ2 640 aa6.42□□□□□ -1.38
PTPRM-215ENST00000583289 TDRD9Q8NDG6 1382 aaKnown RBP6.42□□□□□ -1.38
PTPRM-215ENST00000583289 PNMA6FA0A0J9YX94 578 aa6.41□□□□□ -1.38
PTPRM-215ENST00000583289 DYNC1LI2O43237 492 aaPredicted RBP6.41□□□□□ -1.38
PTPRM-215ENST00000583289 TREHO43280 583 aa6.41□□□□□ -1.38
PTPRM-215ENST00000583289 ZNF862O60290 1169 aa6.41□□□□□ -1.38
PTPRM-215ENST00000583289 DSC3Q14574 896 aa6.41□□□□□ -1.38
PTPRM-215ENST00000583289 ENOX2Q16206 610 aaKnown RBP6.41□□□□□ -1.38
PTPRM-215ENST00000583289 AGBL5Q8NDL9 886 aa6.41□□□□□ -1.38
PTPRM-215ENST00000583289 WDR89Q96FK6 387 aaPredicted RBP6.41□□□□□ -1.38
PTPRM-215ENST00000583289 ZC3H12CQ9C0D7 883 aaKnown RBP6.41□□□□□ -1.38
PTPRM-215ENST00000583289 ZC3H7BQ9UGR2 993 aaKnown RBP6.41□□□□□ -1.38
PTPRM-215ENST00000583289 KIF21AQ7Z4S6 1674 aa6.41□□□□□ -1.38
PTPRM-215ENST00000583289 MTUS2Q5JR59 1369 aa6.41□□□□□ -1.38
PTPRM-215ENST00000583289 CCDC18Q5T9S5 1454 aa6.41□□□□□ -1.38
PTPRM-215ENST00000583289 MRC2Q9UBG0 1479 aa6.41□□□□□ -1.38
PTPRM-215ENST00000583289 PLCB3Q01970 1234 aa6.4□□□□□ -1.38
PTPRM-215ENST00000583289 FAM50AQ14320 339 aaKnown RBP6.4□□□□□ -1.38
PTPRM-215ENST00000583289 PI16Q6UXB8 463 aa6.4□□□□□ -1.38
PTPRM-215ENST00000583289 SULF2Q8IWU5 870 aa6.4□□□□□ -1.38
PTPRM-215ENST00000583289 SMYD4Q8IYR2 804 aaPredicted RBP6.4□□□□□ -1.38
PTPRM-215ENST00000583289 FLCNQ8NFG4 579 aa6.4□□□□□ -1.38
PTPRM-215ENST00000583289 FBF1Q8TES7 1133 aa6.4□□□□□ -1.38
PTPRM-215ENST00000583289 EMILIN2Q9BXX0 1053 aa6.4□□□□□ -1.38
PTPRM-215ENST00000583289 SRCIN1Q9C0H9 1055 aa6.4□□□□□ -1.38
PTPRM-215ENST00000583289 RNF114Q9Y508 228 aa6.4□□□□□ -1.38
PTPRM-215ENST00000583289 PCDHGC5Q9Y5F6 944 aa6.4□□□□□ -1.38
PTPRM-215ENST00000583289 GRIN2BQ13224 1484 aa6.4□□□□□ -1.39
PTPRM-215ENST00000583289 IFT140Q96RY7 1462 aa6.4□□□□□ -1.39
PTPRM-215ENST00000583289 SAMD9Q5K651 1589 aa6.4□□□□□ -1.39
PTPRM-215ENST00000583289 TARBP1Q13395 1621 aaKnown RBP6.39□□□□□ -1.39
PTPRM-215ENST00000583289 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.39□□□□□ -1.39
PTPRM-215ENST00000583289 LCE3BQ5TA77 95 aa6.39□□□□□ -1.39
PTPRM-215ENST00000583289 NFXL1Q6ZNB6 911 aa6.39□□□□□ -1.39
PTPRM-215ENST00000583289 PDZD3Q86UT5 571 aa6.39□□□□□ -1.39
PTPRM-215ENST00000583289 STK11IPQ8N1F8 1099 aa6.39□□□□□ -1.39
PTPRM-215ENST00000583289 KCNB2Q92953 911 aa6.39□□□□□ -1.39
PTPRM-215ENST00000583289 LGR6Q9HBX8 967 aa6.39□□□□□ -1.39
PTPRM-215ENST00000583289 CDK11AQ9UQ88 783 aaPredicted RBP6.39□□□□□ -1.39
PTPRM-215ENST00000583289 AKAP2Q9Y2D5 859 aa6.39□□□□□ -1.39
PTPRM-215ENST00000583289 RAB3GAP2Q9H2M9 1393 aa6.39□□□□□ -1.39
PTPRM-215ENST00000583289 FHOD3Q2V2M9 1422 aa6.39□□□□□ -1.39
PTPRM-215ENST00000583289 NME2P22392 152 aa6.38□□□□□ -1.39
PTPRM-215ENST00000583289 GSTT1P30711 240 aa6.38□□□□□ -1.39
PTPRM-215ENST00000583289 ITGAEP38570 1179 aa6.38□□□□□ -1.39
PTPRM-215ENST00000583289 NXPE4Q6UWF7 544 aa6.38□□□□□ -1.39
PTPRM-215ENST00000583289 CBLL1Q75N03 491 aa6.38□□□□□ -1.39
PTPRM-215ENST00000583289 KRTAP1-3Q8IUG1 177 aa6.38□□□□□ -1.39
PTPRM-215ENST00000583289 ZSCAN29Q8IWY8 852 aaPredicted RBP6.38□□□□□ -1.39
PTPRM-215ENST00000583289 MISP3Q96FF7 219 aa6.38□□□□□ -1.39
PTPRM-215ENST00000583289 DISC1Q9NRI5 854 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms