RNA–Protein interactions for RNA: ENST00000581570.5

SS18-219, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-219ENST00000581570 FGFR2P21802 821 aa15.99■□□□□ 0.15
SS18-219ENST00000581570 PUM3Q15397 648 aaKnown RBP15.99■□□□□ 0.15
SS18-219ENST00000581570 DIXDC1Q155Q3 683 aa15.99■□□□□ 0.15
SS18-219ENST00000581570 NECAB2Q7Z6G3 386 aa15.99■□□□□ 0.15
SS18-219ENST00000581570 ZFPM1Q8IX07 1006 aa15.99■□□□□ 0.15
SS18-219ENST00000581570 SCYL3Q8IZE3 742 aa15.99■□□□□ 0.15
SS18-219ENST00000581570 ANKRD44Q8N8A2 993 aa15.99■□□□□ 0.15
SS18-219ENST00000581570 KLHDC4Q8TBB5 520 aa15.99■□□□□ 0.15
SS18-219ENST00000581570 CRISPLD2Q9H0B8 497 aa15.99■□□□□ 0.15
SS18-219ENST00000581570 PAK6Q9NQU5 681 aaPredicted RBP15.99■□□□□ 0.15
SS18-219ENST00000581570 PICK1Q9NRD5 415 aa15.99■□□□□ 0.15
SS18-219ENST00000581570 TAOK2Q9UL54 1235 aa15.99■□□□□ 0.15
SS18-219ENST00000581570 SLC45A1Q9Y2W3 748 aa15.99■□□□□ 0.15
SS18-219ENST00000581570 CACNA1FO60840 1977 aa15.98■□□□□ 0.15
SS18-219ENST00000581570 PHF20L1A8MW92 1017 aa15.98■□□□□ 0.15
SS18-219ENST00000581570 PTPRAP18433 802 aa15.98■□□□□ 0.15
SS18-219ENST00000581570 BMP8BP34820 402 aa15.98■□□□□ 0.15
SS18-219ENST00000581570 SMCR8Q8TEV9 937 aaPredicted RBP15.98■□□□□ 0.15
SS18-219ENST00000581570 GDF15Q99988 308 aa15.98■□□□□ 0.15
SS18-219ENST00000581570 AFG3L2Q9Y4W6 797 aa15.98■□□□□ 0.15
SS18-219ENST00000581570 SLC5A1P13866 664 aa15.97■□□□□ 0.15
SS18-219ENST00000581570 PRDX5P30044 214 aa15.97■□□□□ 0.15
SS18-219ENST00000581570 GPR153Q6NV75 609 aa15.97■□□□□ 0.15
SS18-219ENST00000581570 COA7Q96BR5 231 aa15.97■□□□□ 0.15
SS18-219ENST00000581570 SPINK5Q9NQ38 1064 aaPredicted RBP15.97■□□□□ 0.15
SS18-219ENST00000581570 LDHBP07195 334 aaKnown RBP15.96■□□□□ 0.15
SS18-219ENST00000581570 C7orf61Q8IZ16 206 aa15.96■□□□□ 0.15
SS18-219ENST00000581570 DEFB123Q8N688 67 aa15.96■□□□□ 0.15
SS18-219ENST00000581570 DIS3LQ8TF46 1054 aaKnown RBP15.96■□□□□ 0.15
SS18-219ENST00000581570 LPIN2Q92539 896 aa15.96■□□□□ 0.15
SS18-219ENST00000581570 ZMYND8Q9ULU4 1186 aaPredicted RBP15.96■□□□□ 0.15
SS18-219ENST00000581570 LRRFIP2Q9Y608 721 aaKnown RBP15.96■□□□□ 0.15
SS18-219ENST00000581570 RGS3P49796 1198 aa15.95■□□□□ 0.14
SS18-219ENST00000581570 ZSCAN29Q8IWY8 852 aaPredicted RBP15.95■□□□□ 0.14
SS18-219ENST00000581570 ANKRD13CQ8N6S4 541 aa15.95■□□□□ 0.14
SS18-219ENST00000581570 ANKLE1Q8NAG6 615 aa15.95■□□□□ 0.14
SS18-219ENST00000581570 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.95■□□□□ 0.14
SS18-219ENST00000581570 COL6A3P12111 3177 aa15.95■□□□□ 0.14
SS18-219ENST00000581570 ENTPD3O75355 529 aa15.94■□□□□ 0.14
SS18-219ENST00000581570 IDI2Q9BXS1 227 aa15.94■□□□□ 0.14
SS18-219ENST00000581570 STXBP5LQ9Y2K9 1186 aa15.94■□□□□ 0.14
SS18-219ENST00000581570 ATRNL1Q5VV63 1379 aa15.94■□□□□ 0.14
SS18-219ENST00000581570 TRIM75PA6NK02 468 aa15.93■□□□□ 0.14
SS18-219ENST00000581570 EYA2O00167 538 aa15.93■□□□□ 0.14
SS18-219ENST00000581570 MAP3K10Q02779 954 aa15.93■□□□□ 0.14
SS18-219ENST00000581570 LRIT3Q3SXY7 679 aa15.93■□□□□ 0.14
SS18-219ENST00000581570 Q7L0L9 218 aa15.93■□□□□ 0.14
SS18-219ENST00000581570 NBPF3Q9H094 633 aa15.93■□□□□ 0.14
SS18-219ENST00000581570 GNL3LQ9NVN8 582 aaKnown RBP15.93■□□□□ 0.14
SS18-219ENST00000581570 AGTPBP1Q9UPW5 1226 aa15.93■□□□□ 0.14
SS18-219ENST00000581570 CTNND1O60716 968 aaKnown RBP15.92■□□□□ 0.14
SS18-219ENST00000581570 SLURP2P0DP57 97 aa15.92■□□□□ 0.14
SS18-219ENST00000581570 SYN1P17600 705 aa15.92■□□□□ 0.14
SS18-219ENST00000581570 FAM110CQ1W6H9 321 aa15.92■□□□□ 0.14
SS18-219ENST00000581570 SH3BP5LQ7L8J4 393 aa15.92■□□□□ 0.14
SS18-219ENST00000581570 PNMA3Q9UL41 463 aa15.92■□□□□ 0.14
SS18-219ENST00000581570 MGAMO43451 1857 aa15.91■□□□□ 0.14
SS18-219ENST00000581570 DDTLA6NHG4 134 aaPredicted RBP15.91■□□□□ 0.14
SS18-219ENST00000581570 HMGCRP04035 888 aa15.91■□□□□ 0.14
SS18-219ENST00000581570 MYCNP04198 464 aaPredicted RBP15.91■□□□□ 0.14
SS18-219ENST00000581570 MAGEA10P43363 369 aaPredicted RBP15.91■□□□□ 0.14
SS18-219ENST00000581570 RFX5P48382 616 aaPredicted RBP15.91■□□□□ 0.14
SS18-219ENST00000581570 TREML2Q5T2D2 321 aa15.91■□□□□ 0.14
SS18-219ENST00000581570 CCDC84Q86UT8 332 aaPredicted RBP15.91■□□□□ 0.14
SS18-219ENST00000581570 HMX1Q9NP08 348 aaPredicted RBP15.91■□□□□ 0.14
SS18-219ENST00000581570 MTMR10Q9NXD2 777 aa15.91■□□□□ 0.14
SS18-219ENST00000581570 DENND2AQ9ULE3 1009 aa15.91■□□□□ 0.14
SS18-219ENST00000581570 RPTORQ8N122 1335 aa15.91■□□□□ 0.14
SS18-219ENST00000581570 SALL1Q9NSC2 1324 aa15.91■□□□□ 0.14
SS18-219ENST00000581570 AK9Q5TCS8 1911 aa15.9■□□□□ 0.14
SS18-219ENST00000581570 A0A0C4DFX4 3053 aa15.9■□□□□ 0.14
SS18-219ENST00000581570 TDHQ8IZJ6 230 aa15.9■□□□□ 0.14
SS18-219ENST00000581570 USP44Q9H0E7 712 aa15.9■□□□□ 0.14
SS18-219ENST00000581570 C11orf49Q9H6J7 331 aa15.9■□□□□ 0.14
SS18-219ENST00000581570 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.9■□□□□ 0.14
SS18-219ENST00000581570 LAMA3Q16787 3333 aa15.89■□□□□ 0.13
SS18-219ENST00000581570 GCLCP48506 637 aaPredicted RBP15.89■□□□□ 0.13
SS18-219ENST00000581570 TRIM32Q13049 653 aa15.89■□□□□ 0.13
SS18-219ENST00000581570 ATP2B3Q16720 1220 aa15.89■□□□□ 0.13
SS18-219ENST00000581570 ATG9AQ7Z3C6 839 aa15.89■□□□□ 0.13
SS18-219ENST00000581570 UBE2OQ9C0C9 1292 aaKnown RBP15.89■□□□□ 0.13
SS18-219ENST00000581570 DDX4Q9NQI0 724 aaKnown RBP15.89■□□□□ 0.13
SS18-219ENST00000581570 CEP126Q9P2H0 1117 aa15.89■□□□□ 0.13
SS18-219ENST00000581570 GJD2Q9UKL4 321 aa15.89■□□□□ 0.13
SS18-219ENST00000581570 GAKO14976 1311 aa15.89■□□□□ 0.13
SS18-219ENST00000581570 SEMA3EO15041 775 aa15.88■□□□□ 0.13
SS18-219ENST00000581570 PHKA1P46020 1223 aa15.88■□□□□ 0.13
SS18-219ENST00000581570 PICALMQ13492 652 aa15.88■□□□□ 0.13
SS18-219ENST00000581570 SLF2Q8IX21 1173 aa15.88■□□□□ 0.13
SS18-219ENST00000581570 ZGPATQ8N5A5 531 aaKnown RBP15.88■□□□□ 0.13
SS18-219ENST00000581570 MRPL50Q8N5N7 158 aaKnown RBP15.88■□□□□ 0.13
SS18-219ENST00000581570 PROCA1Q8NCQ7 364 aaPredicted RBP15.88■□□□□ 0.13
SS18-219ENST00000581570 MRS2Q9HD23 443 aa15.88■□□□□ 0.13
SS18-219ENST00000581570 OGDHLQ9ULD0 1010 aa15.88■□□□□ 0.13
SS18-219ENST00000581570 ZBTB22O15209 634 aa15.87■□□□□ 0.13
SS18-219ENST00000581570 SPP2Q13103 211 aa15.87■□□□□ 0.13
SS18-219ENST00000581570 PABPC4Q13310 644 aaKnown RBP eCLIP15.87■□□□□ 0.13
SS18-219ENST00000581570 DZIP1Q86YF9 867 aaKnown RBP15.87■□□□□ 0.13
SS18-219ENST00000581570 FAM163AQ96GL9 167 aaPredicted RBP15.87■□□□□ 0.13
SS18-219ENST00000581570 SIL1Q9H173 461 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 143.5 ms