RNA–Protein interactions for RNA: ENST00000581000.1

NEK8-205, Transcript of NIMA related kinase 8, humanhuman

TSL 3

Gene NEK8, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK8-205ENST00000581000 SCN9AQ15858 1988 aa16.36■□□□□ 0.21
NEK8-205ENST00000581000 TIAM2Q8IVF5 1701 aa16.36■□□□□ 0.21
NEK8-205ENST00000581000 RAD17O75943 681 aa16.35■□□□□ 0.21
NEK8-205ENST00000581000 USP17L8P0C7I0 530 aa16.35■□□□□ 0.21
NEK8-205ENST00000581000 APLP1P51693 650 aa16.35■□□□□ 0.21
NEK8-205ENST00000581000 PPARAQ07869 468 aa16.35■□□□□ 0.21
NEK8-205ENST00000581000 AKNAD1Q5T1N1 836 aa16.35■□□□□ 0.21
NEK8-205ENST00000581000 CTR9Q6PD62 1173 aa16.35■□□□□ 0.21
NEK8-205ENST00000581000 ARHGAP27Q6ZUM4 889 aa16.35■□□□□ 0.21
NEK8-205ENST00000581000 TEX11Q8IYF3 940 aa16.35■□□□□ 0.21
NEK8-205ENST00000581000 SH3RF3Q8TEJ3 882 aaPredicted RBP16.35■□□□□ 0.21
NEK8-205ENST00000581000 IDI2Q9BXS1 227 aa16.35■□□□□ 0.21
NEK8-205ENST00000581000 ROBO3Q96MS0 1386 aa16.35■□□□□ 0.21
NEK8-205ENST00000581000 MYH2Q9UKX2 1941 aa16.35■□□□□ 0.21
NEK8-205ENST00000581000 LAMA4Q16363 1823 aa16.34■□□□□ 0.21
NEK8-205ENST00000581000 ZNF280AP59817 542 aaPredicted RBP16.34■□□□□ 0.21
NEK8-205ENST00000581000 EXOSC10Q01780 885 aaKnown RBP16.34■□□□□ 0.21
NEK8-205ENST00000581000 RASSF7Q02833 373 aa16.34■□□□□ 0.21
NEK8-205ENST00000581000 FKBP1CQ5VVH2 108 aa16.34■□□□□ 0.21
NEK8-205ENST00000581000 MFSD6Q6ZSS7 791 aa16.34■□□□□ 0.21
NEK8-205ENST00000581000 RALYLQ86SE5 291 aaKnown RBP16.34■□□□□ 0.21
NEK8-205ENST00000581000 CHMP4CQ96CF2 233 aa16.34■□□□□ 0.21
NEK8-205ENST00000581000 ZSCAN31Q96LW9 406 aaPredicted RBP16.34■□□□□ 0.21
NEK8-205ENST00000581000 MXD3Q9BW11 206 aa16.34■□□□□ 0.21
NEK8-205ENST00000581000 ZNF287Q9HBT7 754 aa16.34■□□□□ 0.21
NEK8-205ENST00000581000 PDRG1Q9NUG6 133 aa16.34■□□□□ 0.21
NEK8-205ENST00000581000 ZC3H4Q9UPT8 1303 aaKnown RBP16.34■□□□□ 0.21
NEK8-205ENST00000581000 COL2A1P02458 1487 aaPredicted RBP16.34■□□□□ 0.21
NEK8-205ENST00000581000 USP17L12C9JPN9 530 aa16.33■□□□□ 0.2
NEK8-205ENST00000581000 USP17L21D6R901 530 aa16.33■□□□□ 0.2
NEK8-205ENST00000581000 F8W031 263 aaPredicted RBP16.33■□□□□ 0.2
NEK8-205ENST00000581000 MCM5P33992 734 aa16.33■□□□□ 0.2
NEK8-205ENST00000581000 C12orf60Q5U649 245 aa16.33■□□□□ 0.2
NEK8-205ENST00000581000 STOX1Q6ZVD7 989 aa16.33■□□□□ 0.2
NEK8-205ENST00000581000 TTC6Q86TZ1 520 aa16.33■□□□□ 0.2
NEK8-205ENST00000581000 MB21D2Q8IYB1 491 aaPredicted RBP16.33■□□□□ 0.2
NEK8-205ENST00000581000 UPF3BQ9BZI7 483 aaKnown RBP16.33■□□□□ 0.2
NEK8-205ENST00000581000 DHX36Q9H2U1 1008 aaKnown RBP16.33■□□□□ 0.2
NEK8-205ENST00000581000 USP40Q9NVE5 1235 aa16.33■□□□□ 0.2
NEK8-205ENST00000581000 ORC4O43929 436 aa16.32■□□□□ 0.2
NEK8-205ENST00000581000 ENTPD3O75355 529 aa16.32■□□□□ 0.2
NEK8-205ENST00000581000 WDHD1O75717 1129 aaPredicted RBP16.32■□□□□ 0.2
NEK8-205ENST00000581000 FLT1P17948 1338 aa16.32■□□□□ 0.2
NEK8-205ENST00000581000 SCNN1DP51172 638 aa16.32■□□□□ 0.2
NEK8-205ENST00000581000 PRELPP51888 382 aa16.32■□□□□ 0.2
NEK8-205ENST00000581000 PDE4BQ07343 736 aa16.32■□□□□ 0.2
NEK8-205ENST00000581000 CFAP100Q494V2 611 aa16.32■□□□□ 0.2
NEK8-205ENST00000581000 CDC42EP5Q6NZY7 148 aa16.32■□□□□ 0.2
NEK8-205ENST00000581000 GPC2Q8N158 579 aa16.32■□□□□ 0.2
NEK8-205ENST00000581000 TGFBRAP1Q8WUH2 860 aa16.32■□□□□ 0.2
NEK8-205ENST00000581000 TMEM87BQ96K49 555 aa16.32■□□□□ 0.2
NEK8-205ENST00000581000 NBPF3Q9H094 633 aa16.32■□□□□ 0.2
NEK8-205ENST00000581000 SH2B1Q9NRF2 756 aaPredicted RBP16.32■□□□□ 0.2
NEK8-205ENST00000581000 MCM9Q9NXL9 1143 aa16.32■□□□□ 0.2
NEK8-205ENST00000581000 SPDYE2BA6NHP3 402 aa16.31■□□□□ 0.2
NEK8-205ENST00000581000 SPDYE6P0CI01 402 aa16.31■□□□□ 0.2
NEK8-205ENST00000581000 EVCP57679 992 aa16.31■□□□□ 0.2
NEK8-205ENST00000581000 HAND2P61296 217 aa16.31■□□□□ 0.2
NEK8-205ENST00000581000 DLGAP5Q15398 846 aa16.31■□□□□ 0.2
NEK8-205ENST00000581000 TBC1D10CQ8IV04 446 aa16.31■□□□□ 0.2
NEK8-205ENST00000581000 DNAJC5GQ8N7S2 189 aa16.31■□□□□ 0.2
NEK8-205ENST00000581000 ESR2Q92731 530 aa16.31■□□□□ 0.2
NEK8-205ENST00000581000 ZBED3Q96IU2 234 aaPredicted RBP16.31■□□□□ 0.2
NEK8-205ENST00000581000 LIMCH1Q9UPQ0 1083 aa16.31■□□□□ 0.2
NEK8-205ENST00000581000 TAF6LQ9Y6J9 622 aa16.31■□□□□ 0.2
NEK8-205ENST00000581000 RBM5P52756 815 aaKnown RBP eCLIP16.3■□□□□ 0.2
NEK8-205ENST00000581000 AK2P54819 239 aa16.3■□□□□ 0.2
NEK8-205ENST00000581000 TMTC2Q8N394 836 aa16.3■□□□□ 0.2
NEK8-205ENST00000581000 INTS4Q96HW7 963 aaKnown RBP16.3■□□□□ 0.2
NEK8-205ENST00000581000 OSBPL5Q9H0X9 879 aaPredicted RBP16.3■□□□□ 0.2
NEK8-205ENST00000581000 EHD4Q9H223 541 aa16.3■□□□□ 0.2
NEK8-205ENST00000581000 TMOD2Q9NZR1 351 aa16.3■□□□□ 0.2
NEK8-205ENST00000581000 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.3■□□□□ 0.2
NEK8-205ENST00000581000 DICER1Q9UPY3 1922 aaKnown RBP16.29■□□□□ 0.2
NEK8-205ENST00000581000 MINDY4BA8MYZ0 360 aa16.29■□□□□ 0.2
NEK8-205ENST00000581000 MYO1BO43795 1136 aa16.29■□□□□ 0.2
NEK8-205ENST00000581000 TOMM70O94826 608 aa16.29■□□□□ 0.2
NEK8-205ENST00000581000 CD2BP2O95400 341 aaKnown RBP16.29■□□□□ 0.2
NEK8-205ENST00000581000 POLR3DP05423 398 aaPredicted RBP16.29■□□□□ 0.2
NEK8-205ENST00000581000 CUL4AQ13619 759 aa16.29■□□□□ 0.2
NEK8-205ENST00000581000 CCDC178Q5BJE1 867 aa16.29■□□□□ 0.2
NEK8-205ENST00000581000 ZBTB12Q9Y330 459 aaPredicted RBP16.29■□□□□ 0.2
NEK8-205ENST00000581000 DDX60LQ5H9U9 1706 aaKnown RBP16.28■□□□□ 0.2
NEK8-205ENST00000581000 ATRNL1Q5VV63 1379 aa16.28■□□□□ 0.2
NEK8-205ENST00000581000 HLA-DOAP06340 250 aa16.28■□□□□ 0.2
NEK8-205ENST00000581000 LIFRP42702 1097 aa16.28■□□□□ 0.2
NEK8-205ENST00000581000 CTDSPL2Q05D32 466 aa16.28■□□□□ 0.2
NEK8-205ENST00000581000 SART3Q15020 963 aaKnown RBP16.28■□□□□ 0.2
NEK8-205ENST00000581000 FAM83AQ86UY5 434 aa16.28■□□□□ 0.2
NEK8-205ENST00000581000 MAPKAPK5Q8IW41 473 aa16.28■□□□□ 0.2
NEK8-205ENST00000581000 TMX3Q96JJ7 454 aa16.28■□□□□ 0.2
NEK8-205ENST00000581000 PRMT6Q96LA8 375 aaPredicted RBP16.28■□□□□ 0.2
NEK8-205ENST00000581000 SWAP70Q9UH65 585 aa16.28■□□□□ 0.2
NEK8-205ENST00000581000 FOCADQ5VW36 1801 aa16.28■□□□□ 0.2
NEK8-205ENST00000581000 RCAN1P53805 252 aa16.27■□□□□ 0.2
NEK8-205ENST00000581000 TOB2Q14106 344 aaPredicted RBP16.27■□□□□ 0.2
NEK8-205ENST00000581000 SPDYE2Q495Y8 402 aa16.27■□□□□ 0.2
NEK8-205ENST00000581000 C16orf86Q6ZW13 317 aa16.27■□□□□ 0.2
NEK8-205ENST00000581000 ZNF274Q96GC6 653 aaPredicted RBP16.27■□□□□ 0.2
NEK8-205ENST00000581000 MYOZ2Q9NPC6 264 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms