RNA–Protein interactions for RNA: ENST00000580751.5

SS18-216, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-216ENST00000580751 CELF2O95319 508 aaKnown RBP18.62■□□□□ 0.57
SS18-216ENST00000580751 APLP1P51693 650 aa18.62■□□□□ 0.57
SS18-216ENST00000580751 PRAMEF18Q5VWM3 479 aa18.62■□□□□ 0.57
SS18-216ENST00000580751 DLK2Q6UY11 383 aa18.62■□□□□ 0.57
SS18-216ENST00000580751 TGFBRAP1Q8WUH2 860 aa18.62■□□□□ 0.57
SS18-216ENST00000580751 TEPSINQ96N21 525 aa18.62■□□□□ 0.57
SS18-216ENST00000580751 OSBPL5Q9H0X9 879 aaPredicted RBP18.62■□□□□ 0.57
SS18-216ENST00000580751 HELLSQ9NRZ9 838 aa18.62■□□□□ 0.57
SS18-216ENST00000580751 ATRNL1Q5VV63 1379 aa18.62■□□□□ 0.57
SS18-216ENST00000580751 GPAA1O43292 621 aa18.61■□□□□ 0.57
SS18-216ENST00000580751 GNAT2P19087 354 aa18.61■□□□□ 0.57
SS18-216ENST00000580751 FMR1Q06787 632 aaKnown RBP eCLIP18.61■□□□□ 0.57
SS18-216ENST00000580751 CASC1Q6TDU7 716 aa18.61■□□□□ 0.57
SS18-216ENST00000580751 MAPKAPK5Q8IW41 473 aa18.61■□□□□ 0.57
SS18-216ENST00000580751 ZSCAN29Q8IWY8 852 aaPredicted RBP18.61■□□□□ 0.57
SS18-216ENST00000580751 TMEM88BA6NKF7 163 aa18.6■□□□□ 0.57
SS18-216ENST00000580751 M0R2C6 588 aa18.6■□□□□ 0.57
SS18-216ENST00000580751 CDC45O75419 566 aa18.6■□□□□ 0.57
SS18-216ENST00000580751 FKBP1BP68106 108 aa18.6■□□□□ 0.57
SS18-216ENST00000580751 NMIQ13287 307 aaPredicted RBP18.6■□□□□ 0.57
SS18-216ENST00000580751 NBPF12Q5TAG4 269 aaPredicted RBP18.6■□□□□ 0.57
SS18-216ENST00000580751 DDRGK1Q96HY6 314 aa18.6■□□□□ 0.57
SS18-216ENST00000580751 CSRNP1Q96S65 589 aa18.6■□□□□ 0.57
SS18-216ENST00000580751 STRBPQ96SI9 672 aaKnown RBP18.6■□□□□ 0.57
SS18-216ENST00000580751 BACH2Q9BYV9 841 aa18.6■□□□□ 0.57
SS18-216ENST00000580751 DHX36Q9H2U1 1008 aaKnown RBP18.6■□□□□ 0.57
SS18-216ENST00000580751 ATP8A2Q9NTI2 1148 aa18.6■□□□□ 0.57
SS18-216ENST00000580751 SLC4A4Q9Y6R1 1079 aa18.6■□□□□ 0.57
SS18-216ENST00000580751 PAPPA2Q9BXP8 1791 aa18.6■□□□□ 0.57
SS18-216ENST00000580751 SSC5DA1L4H1 1573 aa18.59■□□□□ 0.57
SS18-216ENST00000580751 NAV1Q8NEY1 1877 aa18.59■□□□□ 0.57
SS18-216ENST00000580751 A0A0D9SFI3 127 aa18.59■□□□□ 0.57
SS18-216ENST00000580751 PPP1R12BO60237 982 aaPredicted RBP18.59■□□□□ 0.57
SS18-216ENST00000580751 MCMDC2Q4G0Z9 681 aa18.59■□□□□ 0.57
SS18-216ENST00000580751 CST9Q5W186 159 aa18.59■□□□□ 0.57
SS18-216ENST00000580751 CDAN1Q8IWY9 1227 aa18.59■□□□□ 0.57
SS18-216ENST00000580751 ZFPM1Q8IX07 1006 aa18.59■□□□□ 0.57
SS18-216ENST00000580751 C2orf69Q8N8R5 385 aa18.59■□□□□ 0.57
SS18-216ENST00000580751 FAM227BQ96M60 508 aa18.59■□□□□ 0.57
SS18-216ENST00000580751 SEC62Q99442 399 aaKnown RBP18.59■□□□□ 0.57
SS18-216ENST00000580751 GBA2Q9HCG7 927 aaPredicted RBP18.59■□□□□ 0.57
SS18-216ENST00000580751 DDX60LQ5H9U9 1706 aaKnown RBP18.58■□□□□ 0.57
SS18-216ENST00000580751 MFAP1P55081 439 aaKnown RBP18.58■□□□□ 0.56
SS18-216ENST00000580751 C8orf34Q49A92 452 aa18.58■□□□□ 0.56
SS18-216ENST00000580751 DCAF15Q66K64 600 aa18.58■□□□□ 0.56
SS18-216ENST00000580751 SDR42E1Q8WUS8 393 aa18.58■□□□□ 0.56
SS18-216ENST00000580751 DCP1AQ9NPI6 582 aaPredicted RBP18.58■□□□□ 0.56
SS18-216ENST00000580751 CREBZFQ9NS37 354 aa18.58■□□□□ 0.56
SS18-216ENST00000580751 RAD50Q92878 1312 aa18.57■□□□□ 0.56
SS18-216ENST00000580751 DDTLA6NHG4 134 aaPredicted RBP18.57■□□□□ 0.56
SS18-216ENST00000580751 PRKAB2O43741 272 aa18.57■□□□□ 0.56
SS18-216ENST00000580751 HLA-DOAP06340 250 aa18.57■□□□□ 0.56
SS18-216ENST00000580751 HSPA6P17066 643 aa18.57■□□□□ 0.56
SS18-216ENST00000580751 TTLL12Q14166 644 aaPredicted RBP18.57■□□□□ 0.56
SS18-216ENST00000580751 CWC27Q6UX04 472 aaKnown RBP18.57■□□□□ 0.56
SS18-216ENST00000580751 SH3BP5LQ7L8J4 393 aa18.57■□□□□ 0.56
SS18-216ENST00000580751 ARMC9Q7Z3E5 817 aa18.57■□□□□ 0.56
SS18-216ENST00000580751 RUFY2Q8WXA3 655 aa18.57■□□□□ 0.56
SS18-216ENST00000580751 MKRN1Q9UHC7 482 aaKnown RBP18.57■□□□□ 0.56
SS18-216ENST00000580751 CCDC171Q6TFL3 1326 aa18.56■□□□□ 0.56
SS18-216ENST00000580751 GIMAP6Q6P9H5 292 aa18.56■□□□□ 0.56
SS18-216ENST00000580751 TTC6Q86TZ1 520 aa18.56■□□□□ 0.56
SS18-216ENST00000580751 AMOTL1Q8IY63 956 aa18.56■□□□□ 0.56
SS18-216ENST00000580751 NACAP1Q9BZK3 213 aa18.56■□□□□ 0.56
SS18-216ENST00000580751 MCM9Q9NXL9 1143 aa18.56■□□□□ 0.56
SS18-216ENST00000580751 PI4KBQ9UBF8 816 aa18.56■□□□□ 0.56
SS18-216ENST00000580751 SAP30BPQ9UHR5 308 aaKnown RBP18.56■□□□□ 0.56
SS18-216ENST00000580751 MYH1P12882 1939 aa18.56■□□□□ 0.56
SS18-216ENST00000580751 CHMLP26374 656 aa18.55■□□□□ 0.56
SS18-216ENST00000580751 IREB2P48200 963 aaKnown RBP18.55■□□□□ 0.56
SS18-216ENST00000580751 CCDC129Q6ZRS4 1044 aa18.55■□□□□ 0.56
SS18-216ENST00000580751 PALD1Q9ULE6 856 aa18.55■□□□□ 0.56
SS18-216ENST00000580751 ABT1Q9ULW3 272 aaKnown RBP18.55■□□□□ 0.56
SS18-216ENST00000580751 TLL2Q9Y6L7 1015 aa18.55■□□□□ 0.56
SS18-216ENST00000580751 GSG1L2A8MUP6 293 aa18.54■□□□□ 0.56
SS18-216ENST00000580751 PATL2C9JE40 543 aaKnown RBP18.54■□□□□ 0.56
SS18-216ENST00000580751 APPP05067 770 aa18.54■□□□□ 0.56
SS18-216ENST00000580751 POLR3DP05423 398 aaPredicted RBP18.54■□□□□ 0.56
SS18-216ENST00000580751 PRKG1Q13976 671 aa18.54■□□□□ 0.56
SS18-216ENST00000580751 MAP3K11Q16584 847 aa18.54■□□□□ 0.56
SS18-216ENST00000580751 SAPCD2Q86UD0 394 aa18.54■□□□□ 0.56
SS18-216ENST00000580751 ZNF341Q9BYN7 854 aa18.54■□□□□ 0.56
SS18-216ENST00000580751 ARPP21Q9UBL0 812 aaPredicted RBP18.54■□□□□ 0.56
SS18-216ENST00000580751 HERC5Q9UII4 1024 aaKnown RBP18.54■□□□□ 0.56
SS18-216ENST00000580751 ANGEL1Q9UNK9 670 aaKnown RBP18.54■□□□□ 0.56
SS18-216ENST00000580751 UNCXA6NJT0 531 aa18.53■□□□□ 0.56
SS18-216ENST00000580751 EPB41L2O43491 1005 aaKnown RBP18.53■□□□□ 0.56
SS18-216ENST00000580751 TBC1D12O60347 775 aa18.53■□□□□ 0.56
SS18-216ENST00000580751 TDO2P48775 406 aa18.53■□□□□ 0.56
SS18-216ENST00000580751 HUNKP57058 714 aa18.53■□□□□ 0.56
SS18-216ENST00000580751 MIGA2Q7L4E1 593 aa18.53■□□□□ 0.56
SS18-216ENST00000580751 ZNF589Q86UQ0 364 aaPredicted RBP18.53■□□□□ 0.56
SS18-216ENST00000580751 FOXP4Q8IVH2 680 aaPredicted RBP18.53■□□□□ 0.56
SS18-216ENST00000580751 TRIM34Q9BYJ4 488 aa18.53■□□□□ 0.56
SS18-216ENST00000580751 EHD4Q9H223 541 aa18.53■□□□□ 0.56
SS18-216ENST00000580751 TAOK2Q9UL54 1235 aa18.53■□□□□ 0.56
SS18-216ENST00000580751 USP2O75604 605 aaPredicted RBP18.52■□□□□ 0.56
SS18-216ENST00000580751 MAP3K10Q02779 954 aa18.52■□□□□ 0.56
SS18-216ENST00000580751 CRACR2BQ8N4Y2 399 aaPredicted RBP18.52■□□□□ 0.56
SS18-216ENST00000580751 HHIPL1Q96JK4 782 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms