RNA–Protein interactions for RNA: ENST00000580573.1

KPNB1-210, Transcript of karyopherin subunit beta 1, humanhuman

TSL 3

Gene KPNB1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-210ENST00000580573 MROH7-TTC4A0A0A0MT08 1334 aa9.5□□□□□ -0.89
KPNB1-210ENST00000580573 GPR75-ASB3A0A0A6YYF3 556 aa9.49□□□□□ -0.89
KPNB1-210ENST00000580573 MAGEB6P1A0A0J9YX57 407 aa9.49□□□□□ -0.89
KPNB1-210ENST00000580573 PSMA5P28066 241 aa9.49□□□□□ -0.89
KPNB1-210ENST00000580573 NEK4P51957 841 aa9.49□□□□□ -0.89
KPNB1-210ENST00000580573 GSTO1P78417 241 aa9.49□□□□□ -0.89
KPNB1-210ENST00000580573 COL9A3Q14050 684 aaPredicted RBP9.49□□□□□ -0.89
KPNB1-210ENST00000580573 DALRD3Q5D0E6 543 aaKnown RBP9.49□□□□□ -0.89
KPNB1-210ENST00000580573 MFSD14BQ5SR56 506 aa9.49□□□□□ -0.89
KPNB1-210ENST00000580573 DACT2Q5SW24 774 aa9.49□□□□□ -0.89
KPNB1-210ENST00000580573 STRIP1Q5VSL9 837 aa9.49□□□□□ -0.89
KPNB1-210ENST00000580573 TTLL5Q6EMB2 1281 aa9.49□□□□□ -0.89
KPNB1-210ENST00000580573 RUFY3Q7L099 469 aa9.49□□□□□ -0.89
KPNB1-210ENST00000580573 HSCBQ8IWL3 235 aa9.49□□□□□ -0.89
KPNB1-210ENST00000580573 IFNL3Q8IZI9 196 aa9.49□□□□□ -0.89
KPNB1-210ENST00000580573 MRIQ9BWK5 157 aa9.49□□□□□ -0.89
KPNB1-210ENST00000580573 ARMT1Q9H993 441 aa9.49□□□□□ -0.89
KPNB1-210ENST00000580573 ANAPC4Q9UJX5 808 aa9.49□□□□□ -0.89
KPNB1-210ENST00000580573 WDR19Q8NEZ3 1342 aa9.49□□□□□ -0.89
KPNB1-210ENST00000580573 ROBO3Q96MS0 1386 aa9.49□□□□□ -0.89
KPNB1-210ENST00000580573 GREB1LQ9C091 1923 aaPredicted RBP9.48□□□□□ -0.89
KPNB1-210ENST00000580573 E7EWF7 191 aa9.48□□□□□ -0.89
KPNB1-210ENST00000580573 RIMBP2O15034 1052 aa9.48□□□□□ -0.89
KPNB1-210ENST00000580573 ECE2O60344 883 aa9.48□□□□□ -0.89
KPNB1-210ENST00000580573 LDHCP07864 332 aa9.48□□□□□ -0.89
KPNB1-210ENST00000580573 HMGB1P09429 215 aaKnown RBP9.48□□□□□ -0.89
KPNB1-210ENST00000580573 FGRP09769 529 aa9.48□□□□□ -0.89
KPNB1-210ENST00000580573 CASTP20810 708 aaKnown RBP9.48□□□□□ -0.89
KPNB1-210ENST00000580573 RPS6KB1P23443 525 aa9.48□□□□□ -0.89
KPNB1-210ENST00000580573 GTF2IP78347 998 aa9.48□□□□□ -0.89
KPNB1-210ENST00000580573 HDLBPQ00341 1268 aaKnown RBP9.48□□□□□ -0.89
KPNB1-210ENST00000580573 EXOSC10Q01780 885 aaKnown RBP9.48□□□□□ -0.89
KPNB1-210ENST00000580573 CUL4AQ13619 759 aa9.48□□□□□ -0.89
KPNB1-210ENST00000580573 IMMTQ16891 758 aaKnown RBP9.48□□□□□ -0.89
KPNB1-210ENST00000580573 DZIP1Q86YF9 867 aaKnown RBP9.48□□□□□ -0.89
KPNB1-210ENST00000580573 JAKMIP1Q96N16 626 aaKnown RBP9.48□□□□□ -0.89
KPNB1-210ENST00000580573 UPF3BQ9BZI7 483 aaKnown RBP9.48□□□□□ -0.89
KPNB1-210ENST00000580573 SPON1Q9HCB6 807 aa9.48□□□□□ -0.89
KPNB1-210ENST00000580573 BOLA1Q9Y3E2 137 aa9.48□□□□□ -0.89
KPNB1-210ENST00000580573 YDJCA8MPS7 323 aa9.47□□□□□ -0.89
KPNB1-210ENST00000580573 NFKBIEO00221 500 aa9.47□□□□□ -0.89
KPNB1-210ENST00000580573 TULP1O00294 542 aaPredicted RBP9.47□□□□□ -0.89
KPNB1-210ENST00000580573 PRKAB2O43741 272 aa9.47□□□□□ -0.89
KPNB1-210ENST00000580573 EVCP57679 992 aa9.47□□□□□ -0.89
KPNB1-210ENST00000580573 RHBDL3P58872 404 aa9.47□□□□□ -0.89
KPNB1-210ENST00000580573 DYNLL1P63167 89 aaKnown RBP9.47□□□□□ -0.89
KPNB1-210ENST00000580573 CAMK2BQ13554 666 aa9.47□□□□□ -0.89
KPNB1-210ENST00000580573 AOC3Q16853 763 aa9.47□□□□□ -0.89
KPNB1-210ENST00000580573 DOK7Q18PE1 504 aa9.47□□□□□ -0.89
KPNB1-210ENST00000580573 SBK1Q52WX2 424 aa9.47□□□□□ -0.89
KPNB1-210ENST00000580573 PPP1R15BQ5SWA1 713 aa9.47□□□□□ -0.89
KPNB1-210ENST00000580573 BLOC1S2Q6QNY1 142 aa9.47□□□□□ -0.89
KPNB1-210ENST00000580573 HHIPL2Q6UWX4 724 aa9.47□□□□□ -0.89
KPNB1-210ENST00000580573 TBC1D10CQ8IV04 446 aa9.47□□□□□ -0.89
KPNB1-210ENST00000580573 SLF2Q8IX21 1173 aa9.47□□□□□ -0.89
KPNB1-210ENST00000580573 MB21D2Q8IYB1 491 aaPredicted RBP9.47□□□□□ -0.89
KPNB1-210ENST00000580573 MIGA1Q8NAN2 632 aa9.47□□□□□ -0.89
KPNB1-210ENST00000580573 NEK1Q96PY6 1258 aa9.47□□□□□ -0.89
KPNB1-210ENST00000580573 TMEM121BQ9BXQ6 578 aaPredicted RBP9.47□□□□□ -0.89
KPNB1-210ENST00000580573 DBNDD1Q9H9R9 158 aa9.47□□□□□ -0.89
KPNB1-210ENST00000580573 ATP8A2Q9NTI2 1148 aa9.47□□□□□ -0.89
KPNB1-210ENST00000580573 JAG2Q9Y219 1238 aa9.47□□□□□ -0.89
KPNB1-210ENST00000580573 ARIH1Q9Y4X5 557 aaPredicted RBP9.47□□□□□ -0.89
KPNB1-210ENST00000580573 CYP46A1Q9Y6A2 500 aa9.47□□□□□ -0.89
KPNB1-210ENST00000580573 SLC4A4Q9Y6R1 1079 aa9.47□□□□□ -0.89
KPNB1-210ENST00000580573 USP17L3A6NCW0 530 aa9.46□□□□□ -0.9
KPNB1-210ENST00000580573 USP17L4A6NCW7 530 aa9.46□□□□□ -0.9
KPNB1-210ENST00000580573 ZNF213O14771 459 aa9.46□□□□□ -0.9
KPNB1-210ENST00000580573 PPIP5K2O43314 1243 aa9.46□□□□□ -0.9
KPNB1-210ENST00000580573 PCP11498 1178 aaKnown RBP9.46□□□□□ -0.9
KPNB1-210ENST00000580573 NT5C2P49902 561 aa9.46□□□□□ -0.9
KPNB1-210ENST00000580573 AK2P54819 239 aa9.46□□□□□ -0.9
KPNB1-210ENST00000580573 TOB2Q14106 344 aaPredicted RBP9.46□□□□□ -0.9
KPNB1-210ENST00000580573 DIXDC1Q155Q3 683 aa9.46□□□□□ -0.9
KPNB1-210ENST00000580573 DHX32Q7L7V1 743 aaKnown RBP9.46□□□□□ -0.9
KPNB1-210ENST00000580573 USP17L1Q7RTZ2 530 aa9.46□□□□□ -0.9
KPNB1-210ENST00000580573 TMC2Q8TDI7 906 aa9.46□□□□□ -0.9
KPNB1-210ENST00000580573 STAG1Q8WVM7 1258 aa9.46□□□□□ -0.9
KPNB1-210ENST00000580573 INTS4Q96HW7 963 aaKnown RBP9.46□□□□□ -0.9
KPNB1-210ENST00000580573 L3MBTL3Q96JM7 780 aaPredicted RBP9.46□□□□□ -0.9
KPNB1-210ENST00000580573 GMLQ99445 158 aa9.46□□□□□ -0.9
KPNB1-210ENST00000580573 CRNKL1Q9BZJ0 848 aaKnown RBP9.46□□□□□ -0.9
KPNB1-210ENST00000580573 NACAP1Q9BZK3 213 aa9.46□□□□□ -0.9
KPNB1-210ENST00000580573 NAPBQ9H115 298 aa9.46□□□□□ -0.9
KPNB1-210ENST00000580573 DCP1AQ9NPI6 582 aaPredicted RBP9.46□□□□□ -0.9
KPNB1-210ENST00000580573 AATFQ9NY61 560 aaKnown RBP eCLIP9.46□□□□□ -0.9
KPNB1-210ENST00000580573 DAGLAQ9Y4D2 1042 aa9.46□□□□□ -0.9
KPNB1-210ENST00000580573 MYO3BQ8WXR4 1341 aa9.46□□□□□ -0.9
KPNB1-210ENST00000580573 COL2A1P02458 1487 aaPredicted RBP9.46□□□□□ -0.9
KPNB1-210ENST00000580573 BAG3O95817 575 aa9.45□□□□□ -0.9
KPNB1-210ENST00000580573 IARSP41252 1262 aaKnown RBP9.45□□□□□ -0.9
KPNB1-210ENST00000580573 SLC4A3P48751 1232 aa9.45□□□□□ -0.9
KPNB1-210ENST00000580573 NLGN2Q8NFZ4 835 aa9.45□□□□□ -0.9
KPNB1-210ENST00000580573 SDR42E1Q8WUS8 393 aa9.45□□□□□ -0.9
KPNB1-210ENST00000580573 SLC39A7Q92504 469 aa9.45□□□□□ -0.9
KPNB1-210ENST00000580573 TMX3Q96JJ7 454 aa9.45□□□□□ -0.9
KPNB1-210ENST00000580573 MTA3Q9BTC8 594 aa9.45□□□□□ -0.9
KPNB1-210ENST00000580573 TAOK3Q9H2K8 898 aa9.45□□□□□ -0.9
KPNB1-210ENST00000580573 KCNQ5Q9NR82 932 aa9.45□□□□□ -0.9
KPNB1-210ENST00000580573 PDRG1Q9NUG6 133 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms