RNA–Protein interactions for RNA: ENST00000580237.5

NDEL1-208, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 4

Gene NDEL1, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-208ENST00000580237 OPTNQ96CV9 577 aa13.27□□□□□ -0.29
NDEL1-208ENST00000580237 OTUD5Q96G74 571 aa13.27□□□□□ -0.29
NDEL1-208ENST00000580237 CRBNQ96SW2 442 aa13.27□□□□□ -0.29
NDEL1-208ENST00000580237 IDI2Q9BXS1 227 aa13.27□□□□□ -0.29
NDEL1-208ENST00000580237 RNF186Q9NXI6 227 aa13.27□□□□□ -0.29
NDEL1-208ENST00000580237 AATFQ9NY61 560 aaKnown RBP eCLIP13.27□□□□□ -0.29
NDEL1-208ENST00000580237 NDUFB9Q9Y6M9 179 aa13.27□□□□□ -0.29
NDEL1-208ENST00000580237 WDHD1O75717 1129 aaPredicted RBP13.26□□□□□ -0.29
NDEL1-208ENST00000580237 MAP4K4O95819 1239 aaPredicted RBP13.26□□□□□ -0.29
NDEL1-208ENST00000580237 CYP7A1P22680 504 aa13.26□□□□□ -0.29
NDEL1-208ENST00000580237 TTF1Q15361 905 aaPredicted RBP13.26□□□□□ -0.29
NDEL1-208ENST00000580237 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.26□□□□□ -0.29
NDEL1-208ENST00000580237 GPATCH3Q96I76 525 aa13.26□□□□□ -0.29
NDEL1-208ENST00000580237 ZBTB47Q9UFB7 747 aaPredicted RBP13.26□□□□□ -0.29
NDEL1-208ENST00000580237 MYH8P13535 1937 aa13.25□□□□□ -0.29
NDEL1-208ENST00000580237 COL2A1P02458 1487 aaPredicted RBP13.25□□□□□ -0.29
NDEL1-208ENST00000580237 SMARCA5O60264 1052 aaPredicted RBP13.25□□□□□ -0.29
NDEL1-208ENST00000580237 IGSF3O75054 1194 aa13.25□□□□□ -0.29
NDEL1-208ENST00000580237 RHBDL3P58872 404 aa13.25□□□□□ -0.29
NDEL1-208ENST00000580237 MAGEB6Q8N7X4 407 aa13.25□□□□□ -0.29
NDEL1-208ENST00000580237 SH3RF3Q8TEJ3 882 aaPredicted RBP13.25□□□□□ -0.29
NDEL1-208ENST00000580237 ZKSCAN4Q969J2 545 aaPredicted RBP13.25□□□□□ -0.29
NDEL1-208ENST00000580237 DDX4Q9NQI0 724 aaKnown RBP13.25□□□□□ -0.29
NDEL1-208ENST00000580237 PTPRFP10586 1907 aa13.24□□□□□ -0.29
NDEL1-208ENST00000580237 SPDYE5A6NIY4 337 aa13.24□□□□□ -0.29
NDEL1-208ENST00000580237 GOLIM4O00461 696 aa13.24□□□□□ -0.29
NDEL1-208ENST00000580237 ALDH1A1P00352 501 aa13.24□□□□□ -0.29
NDEL1-208ENST00000580237 OTUD7BQ6GQQ9 843 aa13.24□□□□□ -0.29
NDEL1-208ENST00000580237 ZFPM1Q8IX07 1006 aa13.24□□□□□ -0.29
NDEL1-208ENST00000580237 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.24□□□□□ -0.29
NDEL1-208ENST00000580237 CNKSR2Q8WXI2 1034 aa13.24□□□□□ -0.29
NDEL1-208ENST00000580237 ANTXR1Q9H6X2 564 aa13.24□□□□□ -0.29
NDEL1-208ENST00000580237 SNCAIPQ9Y6H5 919 aa13.24□□□□□ -0.29
NDEL1-208ENST00000580237 SIPA1L1O43166 1804 aa13.24□□□□□ -0.29
NDEL1-208ENST00000580237 ATRNL1Q5VV63 1379 aa13.23□□□□□ -0.29
NDEL1-208ENST00000580237 DDTLA6NHG4 134 aaPredicted RBP13.23□□□□□ -0.29
NDEL1-208ENST00000580237 INPP5BP32019 993 aa13.23□□□□□ -0.29
NDEL1-208ENST00000580237 TM4SF4P48230 202 aa13.23□□□□□ -0.29
NDEL1-208ENST00000580237 INHBEP58166 350 aa13.23□□□□□ -0.29
NDEL1-208ENST00000580237 ADGRA1Q86SQ6 560 aa13.23□□□□□ -0.29
NDEL1-208ENST00000580237 ERO1BQ86YB8 467 aa13.23□□□□□ -0.29
NDEL1-208ENST00000580237 CERS3Q8IU89 383 aa13.23□□□□□ -0.29
NDEL1-208ENST00000580237 MIGA1Q8NAN2 632 aa13.23□□□□□ -0.29
NDEL1-208ENST00000580237 TRIM34Q9BYJ4 488 aa13.23□□□□□ -0.29
NDEL1-208ENST00000580237 OSBPL5Q9H0X9 879 aaPredicted RBP13.23□□□□□ -0.29
NDEL1-208ENST00000580237 BOLA2Q9H3K6 86 aa13.23□□□□□ -0.29
NDEL1-208ENST00000580237 DCTPP1Q9H773 170 aa13.23□□□□□ -0.29
NDEL1-208ENST00000580237 PICK1Q9NRD5 415 aa13.23□□□□□ -0.29
NDEL1-208ENST00000580237 PAG1Q9NWQ8 432 aa13.23□□□□□ -0.29
NDEL1-208ENST00000580237 PCDHB15Q9Y5E8 787 aa13.23□□□□□ -0.29
NDEL1-208ENST00000580237 CCL15-CCL14A0A0B4J2E2 113 aa13.22□□□□□ -0.29
NDEL1-208ENST00000580237 NPM3O75607 178 aaKnown RBP13.22□□□□□ -0.29
NDEL1-208ENST00000580237 TBC1D8O95759 1140 aa13.22□□□□□ -0.29
NDEL1-208ENST00000580237 GJA5P36382 358 aa13.22□□□□□ -0.29
NDEL1-208ENST00000580237 USP5P45974 858 aa13.22□□□□□ -0.29
NDEL1-208ENST00000580237 GTF2A2P52657 109 aa13.22□□□□□ -0.29
NDEL1-208ENST00000580237 CCL15Q16663 113 aa13.22□□□□□ -0.29
NDEL1-208ENST00000580237 TMED8Q6PL24 325 aaPredicted RBP13.22□□□□□ -0.29
NDEL1-208ENST00000580237 IFNL1Q8IU54 200 aa13.22□□□□□ -0.29
NDEL1-208ENST00000580237 MAPKAPK5Q8IW41 473 aa13.22□□□□□ -0.29
NDEL1-208ENST00000580237 TGFBRAP1Q8WUH2 860 aa13.22□□□□□ -0.29
NDEL1-208ENST00000580237 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.22□□□□□ -0.292e-7■□□□□ 9.3
NDEL1-208ENST00000580237 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.22□□□□□ -0.29
NDEL1-208ENST00000580237 DDX60LQ5H9U9 1706 aaKnown RBP13.22□□□□□ -0.29
NDEL1-208ENST00000580237 BAZ2AQ9UIF9 1905 aaKnown RBP13.21□□□□□ -0.29
NDEL1-208ENST00000580237 FLT1P17948 1338 aa13.21□□□□□ -0.29
NDEL1-208ENST00000580237 PHIPQ8WWQ0 1821 aa13.21□□□□□ -0.29
NDEL1-208ENST00000580237 CAPN15O75808 1086 aa13.21□□□□□ -0.29
NDEL1-208ENST00000580237 ATP5JP18859 108 aa13.21□□□□□ -0.29
NDEL1-208ENST00000580237 DYNLL1P63167 89 aaKnown RBP13.21□□□□□ -0.29
NDEL1-208ENST00000580237 PPIL2Q13356 520 aa13.21□□□□□ -0.29
NDEL1-208ENST00000580237 SNAPC2Q13487 334 aa13.21□□□□□ -0.29
NDEL1-208ENST00000580237 SLC9C2Q5TAH2 1124 aa13.21□□□□□ -0.29
NDEL1-208ENST00000580237 SH3BP5LQ7L8J4 393 aa13.21□□□□□ -0.29
NDEL1-208ENST00000580237 CRACR2BQ8N4Y2 399 aaPredicted RBP13.21□□□□□ -0.29
NDEL1-208ENST00000580237 ECHDC1Q9NTX5 307 aa13.21□□□□□ -0.29
NDEL1-208ENST00000580237 MAGEB6P1A0A0J9YX57 407 aa13.2□□□□□ -0.3
NDEL1-208ENST00000580237 FAM196BA6NMK8 535 aa13.2□□□□□ -0.3
NDEL1-208ENST00000580237 IGF2BP3O00425 579 aaKnown RBP eCLIP13.2□□□□□ -0.3
NDEL1-208ENST00000580237 HLA-DOAP06340 250 aa13.2□□□□□ -0.3
NDEL1-208ENST00000580237 CETPP11597 493 aa13.2□□□□□ -0.3
NDEL1-208ENST00000580237 PDE6AP16499 860 aa13.2□□□□□ -0.3
NDEL1-208ENST00000580237 PPP4CP60510 307 aa13.2□□□□□ -0.3
NDEL1-208ENST00000580237 PPATQ06203 517 aa13.2□□□□□ -0.3
NDEL1-208ENST00000580237 NOL9Q5SY16 702 aaKnown RBP13.2□□□□□ -0.3
NDEL1-208ENST00000580237 IFFO2Q5TF58 517 aa13.2□□□□□ -0.3
NDEL1-208ENST00000580237 SCYL3Q8IZE3 742 aa13.2□□□□□ -0.3
NDEL1-208ENST00000580237 EDC3Q96F86 508 aaKnown RBP13.2□□□□□ -0.3
NDEL1-208ENST00000580237 HAUS7Q99871 368 aa13.2□□□□□ -0.3
NDEL1-208ENST00000580237 DHX36Q9H2U1 1008 aaKnown RBP13.2□□□□□ -0.3
NDEL1-208ENST00000580237 SAP30BPQ9UHR5 308 aaKnown RBP13.2□□□□□ -0.3
NDEL1-208ENST00000580237 ZNF532Q9HCE3 1301 aa13.19□□□□□ -0.3
NDEL1-208ENST00000580237 IRF6O14896 467 aa13.19□□□□□ -0.3
NDEL1-208ENST00000580237 DGKZQ13574 1117 aa13.19□□□□□ -0.3
NDEL1-208ENST00000580237 AAMPQ13685 434 aa13.19□□□□□ -0.3
NDEL1-208ENST00000580237 TAF1CQ15572 869 aaPredicted RBP13.19□□□□□ -0.3
NDEL1-208ENST00000580237 SLC4A8Q2Y0W8 1093 aa13.19□□□□□ -0.3
NDEL1-208ENST00000580237 BRI3BPQ8WY22 251 aa13.19□□□□□ -0.3
NDEL1-208ENST00000580237 HERC5Q9UII4 1024 aaKnown RBP13.19□□□□□ -0.3
NDEL1-208ENST00000580237 ZNF112Q9UJU3 913 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms