RNA–Protein interactions for RNA: ENST00000579662.5

ITGB4-206, Transcript of integrin subunit beta 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ITGB4, Length 5,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-206ENST00000579662 POLR3GO15318 223 aaPredicted RBP17.1■□□□□ 0.33
ITGB4-206ENST00000579662 PTGS1P23219 599 aa17.1■□□□□ 0.33
ITGB4-206ENST00000579662 TTC38Q5R3I4 469 aa17.1■□□□□ 0.33
ITGB4-206ENST00000579662 ZCCHC11Q5TAX3 1644 aaKnown RBP17.1■□□□□ 0.33
ITGB4-206ENST00000579662 PCCAP05165 728 aaPredicted RBP17.1■□□□□ 0.33
ITGB4-206ENST00000579662 LMAN1P49257 510 aa17.1■□□□□ 0.33
ITGB4-206ENST00000579662 ADCY7P51828 1080 aa17.1■□□□□ 0.33
ITGB4-206ENST00000579662 ZBTB38Q8NAP3 1195 aaPredicted RBP17.1■□□□□ 0.33
ITGB4-206ENST00000579662 TSNARE1Q96NA8 513 aa17.1■□□□□ 0.33
ITGB4-206ENST00000579662 FRMD4BQ9Y2L6 1034 aa17.1■□□□□ 0.33
ITGB4-206ENST00000579662 BACH1O14867 736 aa17.1■□□□□ 0.33
ITGB4-206ENST00000579662 USP44Q9H0E7 712 aa17.1■□□□□ 0.33
ITGB4-206ENST00000579662 ZSWIM4Q9H7M6 989 aa17.1■□□□□ 0.33
ITGB4-206ENST00000579662 KIF1BO60333 1816 aa17.1■□□□□ 0.33
ITGB4-206ENST00000579662 EPB41P11171 864 aaKnown RBP17.1■□□□□ 0.33
ITGB4-206ENST00000579662 NONOQ15233 471 aaKnown RBP eCLIP17.1■□□□□ 0.33
ITGB4-206ENST00000579662 FLAD1Q8NFF5 587 aa17.1■□□□□ 0.33
ITGB4-206ENST00000579662 SLU7O95391 586 aaKnown RBP17.09■□□□□ 0.33
ITGB4-206ENST00000579662 BEND3Q5T5X7 828 aa17.09■□□□□ 0.33
ITGB4-206ENST00000579662 GOLGA1Q92805 767 aa17.09■□□□□ 0.33
ITGB4-206ENST00000579662 PLEKHF1Q96S99 279 aa17.09■□□□□ 0.33
ITGB4-206ENST00000579662 CTDSPL2Q05D32 466 aa17.09■□□□□ 0.33
ITGB4-206ENST00000579662 VWA3BQ502W6 1294 aa17.09■□□□□ 0.33
ITGB4-206ENST00000579662 SPECC1LQ69YQ0 1117 aa17.09■□□□□ 0.33
ITGB4-206ENST00000579662 ARFGAP3Q9NP61 516 aa17.09■□□□□ 0.33
ITGB4-206ENST00000579662 CEP83Q9Y592 693 aa17.09■□□□□ 0.33
ITGB4-206ENST00000579662 SPDYE4A6NLX3 237 aa17.09■□□□□ 0.33
ITGB4-206ENST00000579662 CCNT1O60563 726 aaKnown RBP17.09■□□□□ 0.33
ITGB4-206ENST00000579662 RPS8P62241 208 aaKnown RBP17.09■□□□□ 0.33
ITGB4-206ENST00000579662 EIF6P56537 245 aaKnown RBP17.08■□□□□ 0.33
ITGB4-206ENST00000579662 E7EWF7 191 aa17.08■□□□□ 0.33
ITGB4-206ENST00000579662 CCDC77Q9BR77 488 aa17.08■□□□□ 0.33
ITGB4-206ENST00000579662 NCOA5Q9HCD5 579 aaKnown RBP17.08■□□□□ 0.33
ITGB4-206ENST00000579662 AKR1B15C9JRZ8 316 aaPredicted RBP17.08■□□□□ 0.32
ITGB4-206ENST00000579662 AKNAD1Q5T1N1 836 aa17.08■□□□□ 0.32
ITGB4-206ENST00000579662 PLIN2Q99541 437 aa17.08■□□□□ 0.32
ITGB4-206ENST00000579662 STMN4Q9H169 189 aaPredicted RBP17.08■□□□□ 0.32
ITGB4-206ENST00000579662 HOMER2Q9NSB8 354 aa17.08■□□□□ 0.32
ITGB4-206ENST00000579662 CTNND2Q9UQB3 1225 aa17.08■□□□□ 0.32
ITGB4-206ENST00000579662 USP6P35125 1406 aa17.08■□□□□ 0.32
ITGB4-206ENST00000579662 IGSF1Q8N6C5 1336 aa17.08■□□□□ 0.32
ITGB4-206ENST00000579662 PDE4DQ08499 809 aa17.08■□□□□ 0.32
ITGB4-206ENST00000579662 LARGE2Q8N3Y3 721 aa17.08■□□□□ 0.32
ITGB4-206ENST00000579662 TMEM94Q12767 1356 aa17.08■□□□□ 0.32
ITGB4-206ENST00000579662 SMTNP53814 917 aa17.07■□□□□ 0.32
ITGB4-206ENST00000579662 ZBTB21Q9ULJ3 1066 aa17.07■□□□□ 0.32
ITGB4-206ENST00000579662 CALUO43852 315 aaPredicted RBP17.07■□□□□ 0.32
ITGB4-206ENST00000579662 TUBBP07437 444 aa17.07■□□□□ 0.32
ITGB4-206ENST00000579662 MLKLQ8NB16 471 aa17.07■□□□□ 0.32
ITGB4-206ENST00000579662 GJA3Q9Y6H8 435 aa17.07■□□□□ 0.32
ITGB4-206ENST00000579662 PRDM1O75626 825 aa17.07■□□□□ 0.32
ITGB4-206ENST00000579662 ARID5AQ03989 594 aa17.07■□□□□ 0.32
ITGB4-206ENST00000579662 PPARAQ07869 468 aa17.07■□□□□ 0.32
ITGB4-206ENST00000579662 ATP2A1O14983 1001 aa17.07■□□□□ 0.32
ITGB4-206ENST00000579662 SLC1A4P43007 532 aa17.07■□□□□ 0.32
ITGB4-206ENST00000579662 KRT40Q6A162 431 aa17.07■□□□□ 0.32
ITGB4-206ENST00000579662 PLCD4Q9BRC7 762 aa17.07■□□□□ 0.32
ITGB4-206ENST00000579662 EXOC7Q9UPT5 735 aa17.07■□□□□ 0.32
ITGB4-206ENST00000579662 TRAF5O00463 557 aa17.06■□□□□ 0.32
ITGB4-206ENST00000579662 OPA1O60313 960 aa17.06■□□□□ 0.32
ITGB4-206ENST00000579662 VTI1AQ96AJ9 217 aa17.06■□□□□ 0.32
ITGB4-206ENST00000579662 NOC4LQ9BVI4 516 aaKnown RBP17.06■□□□□ 0.32
ITGB4-206ENST00000579662 CALCOCO1Q9P1Z2 691 aa17.06■□□□□ 0.32
ITGB4-206ENST00000579662 UBE4AQ14139 1066 aa17.06■□□□□ 0.32
ITGB4-206ENST00000579662 LEO1Q8WVC0 666 aaPredicted RBP17.06■□□□□ 0.32
ITGB4-206ENST00000579662 SREK1Q8WXA9 508 aaKnown RBP17.06■□□□□ 0.32
ITGB4-206ENST00000579662 MAP3K15Q6ZN16 1313 aa17.06■□□□□ 0.32
ITGB4-206ENST00000579662 KCNQ3O43525 872 aa17.06■□□□□ 0.32
ITGB4-206ENST00000579662 CCDC97Q96F63 343 aaPredicted RBP17.06■□□□□ 0.32
ITGB4-206ENST00000579662 ZNF274Q96GC6 653 aaPredicted RBP17.06■□□□□ 0.32
ITGB4-206ENST00000579662 HAUS7Q99871 368 aa17.06■□□□□ 0.32
ITGB4-206ENST00000579662 CALRP27797 417 aaKnown RBP17.05■□□□□ 0.32
ITGB4-206ENST00000579662 CARD10Q9BWT7 1032 aa17.05■□□□□ 0.32
ITGB4-206ENST00000579662 ATP2B4P23634 1241 aa17.05■□□□□ 0.32
ITGB4-206ENST00000579662 BAG1Q99933 345 aaPredicted RBP17.05■□□□□ 0.32
ITGB4-206ENST00000579662 DCAF17Q5H9S7 520 aaPredicted RBP17.05■□□□□ 0.32
ITGB4-206ENST00000579662 CFAP65Q6ZU64 1925 aaKnown RBP17.05■□□□□ 0.32
ITGB4-206ENST00000579662 ZBED4O75132 1171 aa17.05■□□□□ 0.32
ITGB4-206ENST00000579662 EEF2P13639 858 aaKnown RBP17.05■□□□□ 0.32
ITGB4-206ENST00000579662 RNF187Q5TA31 235 aaPredicted RBP17.05■□□□□ 0.32
ITGB4-206ENST00000579662 MCTP2Q6DN12 878 aa17.05■□□□□ 0.32
ITGB4-206ENST00000579662 GUCA1BQ9UMX6 200 aa17.05■□□□□ 0.32
ITGB4-206ENST00000579662 SYNRGQ9UMZ2 1314 aa17.04■□□□□ 0.32
ITGB4-206ENST00000579662 MAPKAPK5Q8IW41 473 aa17.04■□□□□ 0.32
ITGB4-206ENST00000579662 KRT222Q8N1A0 295 aa17.04■□□□□ 0.32
ITGB4-206ENST00000579662 KIFAP3Q92845 792 aa17.04■□□□□ 0.32
ITGB4-206ENST00000579662 GTF3C6Q969F1 213 aa17.04■□□□□ 0.32
ITGB4-206ENST00000579662 CIAO1O76071 339 aa17.04■□□□□ 0.32
ITGB4-206ENST00000579662 FCHSD1Q86WN1 690 aa17.04■□□□□ 0.32
ITGB4-206ENST00000579662 RGS22Q8NE09 1264 aa17.04■□□□□ 0.32
ITGB4-206ENST00000579662 TGFBRAP1Q8WUH2 860 aa17.04■□□□□ 0.32
ITGB4-206ENST00000579662 GPR108Q9NPR9 543 aa17.04■□□□□ 0.32
ITGB4-206ENST00000579662 COMMD10Q9Y6G5 202 aa17.04■□□□□ 0.32
ITGB4-206ENST00000579662 PRDM15P57071 1507 aaPredicted RBP17.04■□□□□ 0.32
ITGB4-206ENST00000579662 NLRP12P59046 1061 aa17.04■□□□□ 0.32
ITGB4-206ENST00000579662 WDR44Q5JSH3 913 aa17.04■□□□□ 0.32
ITGB4-206ENST00000579662 ARHGEF25Q86VW2 580 aa17.04■□□□□ 0.32
ITGB4-206ENST00000579662 NIM1KQ8IY84 436 aa17.04■□□□□ 0.32
ITGB4-206ENST00000579662 LRWD1Q9UFC0 647 aa17.04■□□□□ 0.32
ITGB4-206ENST00000579662 ANKARQ7Z5J8 1434 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms