RNA–Protein interactions for RNA: ENST00000578706.5

UBB-208, Transcript of ubiquitin B, humanhuman

TSL 3

Gene UBB, Length 500 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBB-208ENST00000578706 KCNJ4P48050 445 aa7.96□□□□□ -1.14
UBB-208ENST00000578706 TNNI2P48788 182 aa7.96□□□□□ -1.14
UBB-208ENST00000578706 MFSD14BQ5SR56 506 aa7.96□□□□□ -1.14
UBB-208ENST00000578706 POTEEQ6S8J3 1075 aa7.96□□□□□ -1.14
UBB-208ENST00000578706 LOC285556D6RIA3 1793 aa7.95□□□□□ -1.14
UBB-208ENST00000578706 TRANK1O15050 2925 aa7.95□□□□□ -1.14
UBB-208ENST00000578706 A0A0G2JLL6 359 aaPredicted RBP7.95□□□□□ -1.14
UBB-208ENST00000578706 DDX58O95786 925 aaKnown RBP7.95□□□□□ -1.14
UBB-208ENST00000578706 IGKV5-2P06315 115 aa7.95□□□□□ -1.14
UBB-208ENST00000578706 NOL9Q5SY16 702 aaKnown RBP7.95□□□□□ -1.14
UBB-208ENST00000578706 DUSP27Q5VZP5 1158 aa7.95□□□□□ -1.14
UBB-208ENST00000578706 PRRT2Q7Z6L0 340 aaPredicted RBP7.95□□□□□ -1.14
UBB-208ENST00000578706 ANKRD13CQ8N6S4 541 aa7.95□□□□□ -1.14
UBB-208ENST00000578706 PPM1EQ8WY54 764 aa7.95□□□□□ -1.14
UBB-208ENST00000578706 COA7Q96BR5 231 aa7.95□□□□□ -1.14
UBB-208ENST00000578706 MPHOSPH8Q99549 860 aa7.95□□□□□ -1.14
UBB-208ENST00000578706 ZNF341Q9BYN7 854 aa7.95□□□□□ -1.14
UBB-208ENST00000578706 DOCK2Q92608 1830 aa7.94□□□□□ -1.14
UBB-208ENST00000578706 DOCK1Q14185 1865 aa7.94□□□□□ -1.14
UBB-208ENST00000578706 CXCL11O14625 94 aa7.94□□□□□ -1.14
UBB-208ENST00000578706 BMP1P13497 986 aa7.94□□□□□ -1.14
UBB-208ENST00000578706 ITGA6P23229 1130 aa7.94□□□□□ -1.14
UBB-208ENST00000578706 CCND3P30281 292 aaPredicted RBP7.94□□□□□ -1.14
UBB-208ENST00000578706 MRE11P49959 708 aa7.94□□□□□ -1.14
UBB-208ENST00000578706 EPHB4P54760 987 aa7.94□□□□□ -1.14
UBB-208ENST00000578706 MRPS5P82675 430 aaKnown RBP7.94□□□□□ -1.14
UBB-208ENST00000578706 FAM110CQ1W6H9 321 aa7.94□□□□□ -1.14
UBB-208ENST00000578706 ZNF804AQ7Z570 1209 aa7.94□□□□□ -1.14
UBB-208ENST00000578706 FAM83AQ86UY5 434 aa7.94□□□□□ -1.14
UBB-208ENST00000578706 KHSRPQ92945 711 aaKnown RBP eCLIP7.94□□□□□ -1.141e-8■□□□□ 11.3
UBB-208ENST00000578706 METTL22Q9BUU2 404 aaPredicted RBP7.94□□□□□ -1.14
UBB-208ENST00000578706 RNF216Q9NWF9 866 aaPredicted RBP7.94□□□□□ -1.14
UBB-208ENST00000578706 SLC45A1Q9Y2W3 748 aa7.94□□□□□ -1.14
UBB-208ENST00000578706 DAGLAQ9Y4D2 1042 aa7.94□□□□□ -1.14
UBB-208ENST00000578706 ATRNL1Q5VV63 1379 aa7.94□□□□□ -1.14
UBB-208ENST00000578706 PLXNA1Q9UIW2 1896 aa7.94□□□□□ -1.14
UBB-208ENST00000578706 CFAP54Q96N23 3096 aa7.93□□□□□ -1.14
UBB-208ENST00000578706 DNAJB2P25686 324 aa7.93□□□□□ -1.14
UBB-208ENST00000578706 ATN1P54259 1190 aaPredicted RBP7.93□□□□□ -1.14
UBB-208ENST00000578706 ADGRE1Q14246 886 aa7.93□□□□□ -1.14
UBB-208ENST00000578706 WDR43Q15061 677 aaKnown RBP eCLIP7.93□□□□□ -1.14
UBB-208ENST00000578706 FKBP1CQ5VVH2 108 aa7.93□□□□□ -1.14
UBB-208ENST00000578706 DCAF15Q66K64 600 aa7.93□□□□□ -1.14
UBB-208ENST00000578706 APOBEC3HQ6NTF7 200 aaKnown RBP7.93□□□□□ -1.14
UBB-208ENST00000578706 TDRD7Q8NHU6 1098 aaKnown RBP7.93□□□□□ -1.14
UBB-208ENST00000578706 SMCR8Q8TEV9 937 aaPredicted RBP7.93□□□□□ -1.14
UBB-208ENST00000578706 BADQ92934 168 aa7.93□□□□□ -1.14
UBB-208ENST00000578706 CHMP4AQ9BY43 222 aa7.93□□□□□ -1.14
UBB-208ENST00000578706 USP34Q70CQ2 3546 aa7.92□□□□□ -1.14
UBB-208ENST00000578706 FAM86C2PA6NEL3 165 aa7.92□□□□□ -1.14
UBB-208ENST00000578706 ELL2O00472 640 aaPredicted RBP7.92□□□□□ -1.14
UBB-208ENST00000578706 CYP2B6P20813 491 aa7.92□□□□□ -1.14
UBB-208ENST00000578706 ITGB8P26012 769 aa7.92□□□□□ -1.14
UBB-208ENST00000578706 CASP7P55210 303 aa7.92□□□□□ -1.14
UBB-208ENST00000578706 RTP1P59025 263 aa7.92□□□□□ -1.14
UBB-208ENST00000578706 CACNB2Q08289 660 aaPredicted RBP7.92□□□□□ -1.14
UBB-208ENST00000578706 NEXNQ0ZGT2 675 aa7.92□□□□□ -1.14
UBB-208ENST00000578706 PDE3AQ14432 1141 aa7.92□□□□□ -1.14
UBB-208ENST00000578706 TMEM31Q5JXX7 168 aa7.92□□□□□ -1.14
UBB-208ENST00000578706 AKNAD1Q5T1N1 836 aa7.92□□□□□ -1.14
UBB-208ENST00000578706 TREML2Q5T2D2 321 aa7.92□□□□□ -1.14
UBB-208ENST00000578706 GADL1Q6ZQY3 521 aa7.92□□□□□ -1.14
UBB-208ENST00000578706 SH3RF1Q7Z6J0 888 aa7.92□□□□□ -1.14
UBB-208ENST00000578706 P2RX7Q99572 595 aaKnown RBP7.92□□□□□ -1.14
UBB-208ENST00000578706 SENP6Q9GZR1 1112 aaPredicted RBP7.92□□□□□ -1.14
UBB-208ENST00000578706 ZNF576Q9H609 170 aa7.92□□□□□ -1.14
UBB-208ENST00000578706 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.92□□□□□ -1.14
UBB-208ENST00000578706 TRIM35Q9UPQ4 493 aa7.92□□□□□ -1.14
UBB-208ENST00000578706 MAP3K2Q9Y2U5 619 aa7.92□□□□□ -1.14
UBB-208ENST00000578706 AFG3L2Q9Y4W6 797 aa7.92□□□□□ -1.14
UBB-208ENST00000578706 ZDBF2Q9HCK1 2354 aa7.92□□□□□ -1.14
UBB-208ENST00000578706 LRRC37A2A6NM11 1700 aa7.92□□□□□ -1.14
UBB-208ENST00000578706 SPTBN4Q9H254 2564 aa7.91□□□□□ -1.14
UBB-208ENST00000578706 TRIM43BA6NCK2 446 aa7.91□□□□□ -1.14
UBB-208ENST00000578706 PHF20L1A8MW92 1017 aa7.91□□□□□ -1.14
UBB-208ENST00000578706 PEX10O60683 326 aa7.91□□□□□ -1.14
UBB-208ENST00000578706 CSF1RP07333 972 aa7.91□□□□□ -1.14
UBB-208ENST00000578706 SLURP2P0DP57 97 aa7.91□□□□□ -1.14
UBB-208ENST00000578706 PTPRAP18433 802 aa7.91□□□□□ -1.14
UBB-208ENST00000578706 KCNQ1P51787 676 aa7.91□□□□□ -1.14
UBB-208ENST00000578706 TFF2Q03403 129 aa7.91□□□□□ -1.14
UBB-208ENST00000578706 CCDC85BQ15834 202 aaPredicted RBP7.91□□□□□ -1.14
UBB-208ENST00000578706 CCL14Q16627 93 aa7.91□□□□□ -1.14
UBB-208ENST00000578706 CWF19L2Q2TBE0 894 aaKnown RBP7.91□□□□□ -1.14
UBB-208ENST00000578706 KSR2Q6VAB6 950 aa7.91□□□□□ -1.14
UBB-208ENST00000578706 FASTKD5Q7L8L6 764 aaKnown RBP7.91□□□□□ -1.14
UBB-208ENST00000578706 UBE3BQ7Z3V4 1068 aa7.91□□□□□ -1.14
UBB-208ENST00000578706 CCDC84Q86UT8 332 aaPredicted RBP7.91□□□□□ -1.14
UBB-208ENST00000578706 CCDC146Q8IYE0 955 aa7.91□□□□□ -1.14
UBB-208ENST00000578706 TRIM43Q96BQ3 446 aaPredicted RBP7.91□□□□□ -1.14
UBB-208ENST00000578706 ZDHHC15Q96MV8 337 aa7.91□□□□□ -1.14
UBB-208ENST00000578706 PLA2G12BQ9BX93 195 aa7.91□□□□□ -1.14
UBB-208ENST00000578706 PDLIM7Q9NR12 457 aa7.91□□□□□ -1.14
UBB-208ENST00000578706 PPP4R2Q9NY27 417 aa7.91□□□□□ -1.14
UBB-208ENST00000578706 ZHX2Q9Y6X8 837 aa7.91□□□□□ -1.14
UBB-208ENST00000578706 GBF1Q92538 1859 aa7.91□□□□□ -1.14
UBB-208ENST00000578706 PI4KAP2A4QPH2 592 aa7.9□□□□□ -1.14
UBB-208ENST00000578706 H7C1W4 665 aa7.9□□□□□ -1.14
UBB-208ENST00000578706 GPR37L1O60883 481 aa7.9□□□□□ -1.14
UBB-208ENST00000578706 GYG1P46976 350 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms