RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 COA1Q9GZY4 146 aa12.99□□□□□ -0.33
SKA2-204ENST00000578519 GRPEL1Q9HAV7 217 aa12.99□□□□□ -0.33
SKA2-204ENST00000578519 EPB41L4AQ9HCS5 686 aaPredicted RBP12.99□□□□□ -0.33
SKA2-204ENST00000578519 STK32BQ9NY57 414 aa12.99□□□□□ -0.33
SKA2-204ENST00000578519 ORC3Q9UBD5 711 aaPredicted RBP12.99□□□□□ -0.33
SKA2-204ENST00000578519 UBR3Q6ZT12 1888 aa12.99□□□□□ -0.33
SKA2-204ENST00000578519 DUOX1Q9NRD9 1551 aa12.98□□□□□ -0.33
SKA2-204ENST00000578519 A0A0G2JLW4 131 aa12.98□□□□□ -0.33
SKA2-204ENST00000578519 GOLGA8AA7E2F4 631 aa12.98□□□□□ -0.33
SKA2-204ENST00000578519 PRKAB2O43741 272 aa12.98□□□□□ -0.33
SKA2-204ENST00000578519 JAK2O60674 1132 aa12.98□□□□□ -0.33
SKA2-204ENST00000578519 IL1R1P14778 569 aa12.98□□□□□ -0.33
SKA2-204ENST00000578519 USP5P45974 858 aa12.98□□□□□ -0.33
SKA2-204ENST00000578519 PPP4CP60510 307 aa12.98□□□□□ -0.33
SKA2-204ENST00000578519 CTDSPL2Q05D32 466 aa12.98□□□□□ -0.33
SKA2-204ENST00000578519 DDR1Q08345 913 aa12.98□□□□□ -0.33
SKA2-204ENST00000578519 SSRP1Q08945 709 aaKnown RBP12.98□□□□□ -0.33
SKA2-204ENST00000578519 ZSCAN23Q3MJ62 389 aa12.98□□□□□ -0.33
SKA2-204ENST00000578519 FOXD4L6Q3SYB3 417 aaPredicted RBP12.98□□□□□ -0.33
SKA2-204ENST00000578519 FOXD4L3Q6VB84 417 aaPredicted RBP12.98□□□□□ -0.33
SKA2-204ENST00000578519 CYB5R4Q7L1T6 521 aa12.98□□□□□ -0.33
SKA2-204ENST00000578519 CDC37L1Q7L3B6 337 aa12.98□□□□□ -0.33
SKA2-204ENST00000578519 BRAPQ7Z569 592 aa12.98□□□□□ -0.33
SKA2-204ENST00000578519 COL23A1Q86Y22 540 aaPredicted RBP12.98□□□□□ -0.33
SKA2-204ENST00000578519 GPT2Q8TD30 523 aa12.98□□□□□ -0.33
SKA2-204ENST00000578519 ZC3H12CQ9C0D7 883 aaKnown RBP12.98□□□□□ -0.33
SKA2-204ENST00000578519 CD209Q9NNX6 404 aa12.98□□□□□ -0.33
SKA2-204ENST00000578519 ZSWIM5Q9P217 1185 aa12.98□□□□□ -0.33
SKA2-204ENST00000578519 ATP6V0A2Q9Y487 856 aa12.98□□□□□ -0.33
SKA2-204ENST00000578519 XBP1P17861 261 aa12.97□□□□□ -0.33
SKA2-204ENST00000578519 IARSP41252 1262 aaKnown RBP12.97□□□□□ -0.33
SKA2-204ENST00000578519 AKAP17AQ02040 695 aaKnown RBP12.97□□□□□ -0.33
SKA2-204ENST00000578519 RESTQ13127 1097 aa12.97□□□□□ -0.33
SKA2-204ENST00000578519 APOA5Q6Q788 366 aa12.97□□□□□ -0.33
SKA2-204ENST00000578519 LRSAM1Q6UWE0 723 aa12.97□□□□□ -0.33
SKA2-204ENST00000578519 MPNDQ8N594 471 aa12.97□□□□□ -0.33
SKA2-204ENST00000578519 LY9Q9HBG7 655 aa12.97□□□□□ -0.33
SKA2-204ENST00000578519 BRPF3Q9ULD4 1205 aa12.97□□□□□ -0.33
SKA2-204ENST00000578519 BRWD3Q6RI45 1802 aa12.97□□□□□ -0.33
SKA2-204ENST00000578519 STK36Q9NRP7 1315 aa12.96□□□□□ -0.33
SKA2-204ENST00000578519 IRS2Q9Y4H2 1338 aa12.96□□□□□ -0.33
SKA2-204ENST00000578519 ORC4O43929 436 aa12.96□□□□□ -0.33
SKA2-204ENST00000578519 CTDNEP1O95476 244 aa12.96□□□□□ -0.33
SKA2-204ENST00000578519 DYNLL1P63167 89 aaKnown RBP12.96□□□□□ -0.33
SKA2-204ENST00000578519 GNL2Q13823 731 aaKnown RBP12.96□□□□□ -0.33
SKA2-204ENST00000578519 SAFBQ15424 915 aaKnown RBP eCLIP12.96□□□□□ -0.33
SKA2-204ENST00000578519 GRIPAP1Q4V328 841 aa12.96□□□□□ -0.33
SKA2-204ENST00000578519 CATIPQ7Z7H3 387 aa12.96□□□□□ -0.33
SKA2-204ENST00000578519 FERMT3Q86UX7 667 aa12.96□□□□□ -0.33
SKA2-204ENST00000578519 TBC1D16Q8TBP0 767 aa12.96□□□□□ -0.33
SKA2-204ENST00000578519 SDR42E1Q8WUS8 393 aa12.96□□□□□ -0.33
SKA2-204ENST00000578519 NBPF3Q9H094 633 aa12.96□□□□□ -0.33
SKA2-204ENST00000578519 NCOA5Q9HCD5 579 aaKnown RBP12.96□□□□□ -0.33
SKA2-204ENST00000578519 RBM28Q9NW13 759 aaKnown RBP12.96□□□□□ -0.33
SKA2-204ENST00000578519 AATFQ9NY61 560 aaKnown RBP eCLIP12.96□□□□□ -0.33
SKA2-204ENST00000578519 NEDD4P46934 1319 aa12.95□□□□□ -0.34
SKA2-204ENST00000578519 FAM205AQ6ZU69 1335 aa12.95□□□□□ -0.34
SKA2-204ENST00000578519 USP17L12C9JPN9 530 aa12.95□□□□□ -0.34
SKA2-204ENST00000578519 USP17L21D6R901 530 aa12.95□□□□□ -0.34
SKA2-204ENST00000578519 H0YIN7 160 aa12.95□□□□□ -0.34
SKA2-204ENST00000578519 MMP10P09238 476 aa12.95□□□□□ -0.34
SKA2-204ENST00000578519 FGRP09769 529 aa12.95□□□□□ -0.34
SKA2-204ENST00000578519 SRGNP10124 158 aa12.95□□□□□ -0.34
SKA2-204ENST00000578519 PRDX5P30044 214 aa12.95□□□□□ -0.34
SKA2-204ENST00000578519 COL9A3Q14050 684 aaPredicted RBP12.95□□□□□ -0.34
SKA2-204ENST00000578519 RTN1Q16799 776 aa12.95□□□□□ -0.34
SKA2-204ENST00000578519 ZNF827Q17R98 1081 aa12.95□□□□□ -0.34
SKA2-204ENST00000578519 CC2D2BQ6DHV5 1058 aa12.95□□□□□ -0.34
SKA2-204ENST00000578519 STYK1Q6J9G0 422 aa12.95□□□□□ -0.34
SKA2-204ENST00000578519 CTR9Q6PD62 1173 aa12.95□□□□□ -0.34
SKA2-204ENST00000578519 FBXO18Q8NFZ0 1043 aa12.95□□□□□ -0.34
SKA2-204ENST00000578519 CNKSR1Q969H4 720 aa12.95□□□□□ -0.34
SKA2-204ENST00000578519 FAM163AQ96GL9 167 aaPredicted RBP12.95□□□□□ -0.34
SKA2-204ENST00000578519 HPS5Q9UPZ3 1129 aa12.95□□□□□ -0.34
SKA2-204ENST00000578519 NID2Q14112 1375 aa12.94□□□□□ -0.34
SKA2-204ENST00000578519 MROH7-TTC4A0A0A0MT08 1334 aa12.94□□□□□ -0.34
SKA2-204ENST00000578519 RANBP6O60518 1105 aaKnown RBP12.94□□□□□ -0.34
SKA2-204ENST00000578519 IFNAR1P17181 557 aa12.94□□□□□ -0.34
SKA2-204ENST00000578519 KLRK1P26718 216 aa12.94□□□□□ -0.34
SKA2-204ENST00000578519 IFIT1BQ5T764 474 aaKnown RBP12.94□□□□□ -0.34
SKA2-204ENST00000578519 DPP8Q6V1X1 898 aaPredicted RBP12.94□□□□□ -0.34
SKA2-204ENST00000578519 TXNRD3Q86VQ6 643 aa12.94□□□□□ -0.34
SKA2-204ENST00000578519 MICU3Q86XE3 530 aa12.94□□□□□ -0.34
SKA2-204ENST00000578519 ZSCAN10Q96SZ4 725 aaPredicted RBP12.94□□□□□ -0.34
SKA2-204ENST00000578519 ALG1Q9BT22 464 aa12.94□□□□□ -0.34
SKA2-204ENST00000578519 TSPY26PQ9H489 355 aa12.94□□□□□ -0.34
SKA2-204ENST00000578519 GDPD2Q9HCC8 539 aa12.94□□□□□ -0.34
SKA2-204ENST00000578519 DCP1AQ9NPI6 582 aaPredicted RBP12.94□□□□□ -0.34
SKA2-204ENST00000578519 DDX19AQ9NUU7 478 aaKnown RBP12.94□□□□□ -0.34
SKA2-204ENST00000578519 TIAM2Q8IVF5 1701 aa12.93□□□□□ -0.34
SKA2-204ENST00000578519 COL1A1P02452 1464 aaPredicted RBP12.93□□□□□ -0.34
SKA2-204ENST00000578519 DDAH1O94760 285 aa12.93□□□□□ -0.34
SKA2-204ENST00000578519 BAG6P46379 1132 aa12.93□□□□□ -0.34
SKA2-204ENST00000578519 ADGRA1Q86SQ6 560 aa12.93□□□□□ -0.34
SKA2-204ENST00000578519 JMYQ8N9B5 988 aa12.93□□□□□ -0.34
SKA2-204ENST00000578519 SUPT20HQ8NEM7 779 aa12.93□□□□□ -0.34
SKA2-204ENST00000578519 LEO1Q8WVC0 666 aaPredicted RBP12.93□□□□□ -0.34
SKA2-204ENST00000578519 MKNK2Q9HBH9 465 aa12.93□□□□□ -0.34
SKA2-204ENST00000578519 MCM9Q9NXL9 1143 aa12.93□□□□□ -0.34
SKA2-204ENST00000578519 TMEM63CQ9P1W3 806 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms