RNA–Protein interactions for RNA: ENST00000578240.1

CTC1-203, Transcript of CST telomere replication complex component 1, humanhuman

TSL 2

Gene CTC1, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-203ENST00000578240 MCM2P49736 904 aa15.56■□□□□ 0.08
CTC1-203ENST00000578240 ARHGAP27Q6ZUM4 889 aa15.56■□□□□ 0.08
CTC1-203ENST00000578240 CYB5R4Q7L1T6 521 aa15.56■□□□□ 0.08
CTC1-203ENST00000578240 STAG1Q8WVM7 1258 aa15.56■□□□□ 0.08
CTC1-203ENST00000578240 GMLQ99445 158 aa15.56■□□□□ 0.08
CTC1-203ENST00000578240 NACAP1Q9BZK3 213 aa15.56■□□□□ 0.08
CTC1-203ENST00000578240 ATP8A2Q9NTI2 1148 aa15.56■□□□□ 0.08
CTC1-203ENST00000578240 TPCN1Q9ULQ1 816 aa15.56■□□□□ 0.08
CTC1-203ENST00000578240 MYH4Q9Y623 1939 aa15.56■□□□□ 0.08
CTC1-203ENST00000578240 PSMD14O00487 310 aa15.55■□□□□ 0.08
CTC1-203ENST00000578240 HHIPL2Q6UWX4 724 aa15.55■□□□□ 0.08
CTC1-203ENST00000578240 DHX32Q7L7V1 743 aaKnown RBP15.55■□□□□ 0.08
CTC1-203ENST00000578240 CHST3Q7LGC8 479 aa15.55■□□□□ 0.08
CTC1-203ENST00000578240 GPHNQ9NQX3 736 aaPredicted RBP15.55■□□□□ 0.08
CTC1-203ENST00000578240 DAXXQ9UER7 740 aaPredicted RBP15.55■□□□□ 0.08
CTC1-203ENST00000578240 FLT1P17948 1338 aa15.55■□□□□ 0.08
CTC1-203ENST00000578240 USP17L12C9JPN9 530 aa15.54■□□□□ 0.08
CTC1-203ENST00000578240 USP17L21D6R901 530 aa15.54■□□□□ 0.08
CTC1-203ENST00000578240 RAD17O75943 681 aa15.54■□□□□ 0.08
CTC1-203ENST00000578240 BAG3O95817 575 aa15.54■□□□□ 0.08
CTC1-203ENST00000578240 CRKP46108 304 aa15.54■□□□□ 0.08
CTC1-203ENST00000578240 ME3Q16798 604 aa15.54■□□□□ 0.08
CTC1-203ENST00000578240 AKNAD1Q5T1N1 836 aa15.54■□□□□ 0.08
CTC1-203ENST00000578240 APOBEC3HQ6NTF7 200 aaKnown RBP15.54■□□□□ 0.08
CTC1-203ENST00000578240 Q6ZUG5 572 aa15.54■□□□□ 0.08
CTC1-203ENST00000578240 FOXD4L1Q9NU39 408 aa15.54■□□□□ 0.08
CTC1-203ENST00000578240 B4E1Z4 1266 aa15.54■□□□□ 0.08
CTC1-203ENST00000578240 VIL1P09327 827 aaKnown RBP15.54■□□□□ 0.08
CTC1-203ENST00000578240 HMGB1P09429 215 aaKnown RBP15.54■□□□□ 0.08
CTC1-203ENST00000578240 USP17L8P0C7I0 530 aa15.54■□□□□ 0.08
CTC1-203ENST00000578240 SBK1Q52WX2 424 aa15.54■□□□□ 0.08
CTC1-203ENST00000578240 SLF2Q8IX21 1173 aa15.54■□□□□ 0.08
CTC1-203ENST00000578240 NCOA7Q8NI08 942 aa15.54■□□□□ 0.08
CTC1-203ENST00000578240 TGFBRAP1Q8WUH2 860 aa15.54■□□□□ 0.08
CTC1-203ENST00000578240 TEKT1Q969V4 418 aa15.54■□□□□ 0.08
CTC1-203ENST00000578240 DDX4Q9NQI0 724 aaKnown RBP15.54■□□□□ 0.08
CTC1-203ENST00000578240 ZNRF3Q9ULT6 936 aa15.54■□□□□ 0.08
CTC1-203ENST00000578240 LIMCH1Q9UPQ0 1083 aa15.54■□□□□ 0.08
CTC1-203ENST00000578240 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.54■□□□□ 0.08
CTC1-203ENST00000578240 ATAD5Q96QE3 1844 aa15.53■□□□□ 0.08
CTC1-203ENST00000578240 WDHD1O75717 1129 aaPredicted RBP15.53■□□□□ 0.08
CTC1-203ENST00000578240 FGRP09769 529 aa15.53■□□□□ 0.08
CTC1-203ENST00000578240 POLR2AP24928 1970 aaKnown RBP15.53■□□□□ 0.08
CTC1-203ENST00000578240 RSBN1LQ6PCB5 846 aaPredicted RBP15.53■□□□□ 0.08
CTC1-203ENST00000578240 MAPKAPK5Q8IW41 473 aa15.53■□□□□ 0.08
CTC1-203ENST00000578240 NIM1KQ8IY84 436 aa15.53■□□□□ 0.08
CTC1-203ENST00000578240 TEX11Q8IYF3 940 aa15.53■□□□□ 0.08
CTC1-203ENST00000578240 FBXL16Q8N461 479 aa15.53■□□□□ 0.08
CTC1-203ENST00000578240 WDR19Q8NEZ3 1342 aa15.53■□□□□ 0.08
CTC1-203ENST00000578240 ZDHHC15Q96MV8 337 aa15.53■□□□□ 0.08
CTC1-203ENST00000578240 ARPP21Q9UBL0 812 aaPredicted RBP15.53■□□□□ 0.08
CTC1-203ENST00000578240 MINDY4BA8MYZ0 360 aa15.52■□□□□ 0.08
CTC1-203ENST00000578240 PRC1O43663 620 aa15.52■□□□□ 0.08
CTC1-203ENST00000578240 HDLBPQ00341 1268 aaKnown RBP15.52■□□□□ 0.08
CTC1-203ENST00000578240 CXCL9Q07325 125 aa15.52■□□□□ 0.08
CTC1-203ENST00000578240 SLC4A8Q2Y0W8 1093 aa15.52■□□□□ 0.08
CTC1-203ENST00000578240 CDC42EP5Q6NZY7 148 aa15.52■□□□□ 0.08
CTC1-203ENST00000578240 CERS3Q8IU89 383 aa15.52■□□□□ 0.08
CTC1-203ENST00000578240 BRF1Q92994 677 aa15.52■□□□□ 0.08
CTC1-203ENST00000578240 MYO3BQ8WXR4 1341 aa15.51■□□□□ 0.07
CTC1-203ENST00000578240 PLCG2P16885 1265 aa15.51■□□□□ 0.07
CTC1-203ENST00000578240 USP5P45974 858 aa15.51■□□□□ 0.07
CTC1-203ENST00000578240 C12orf60Q5U649 245 aa15.51■□□□□ 0.07
CTC1-203ENST00000578240 STK11IPQ8N1F8 1099 aa15.51■□□□□ 0.07
CTC1-203ENST00000578240 NOL10Q9BSC4 688 aaKnown RBP15.51■□□□□ 0.07
CTC1-203ENST00000578240 MRIQ9BWK5 157 aa15.51■□□□□ 0.07
CTC1-203ENST00000578240 MCM9Q9NXL9 1143 aa15.51■□□□□ 0.07
CTC1-203ENST00000578240 SERPINA10Q9UK55 444 aa15.51■□□□□ 0.07
CTC1-203ENST00000578240 ZBTB12Q9Y330 459 aaPredicted RBP15.51■□□□□ 0.07
CTC1-203ENST00000578240 KDM4AO75164 1064 aa15.51■□□□□ 0.07
CTC1-203ENST00000578240 MCM5P33992 734 aa15.51■□□□□ 0.07
CTC1-203ENST00000578240 NFIAQ12857 509 aa15.51■□□□□ 0.07
CTC1-203ENST00000578240 RALYLQ86SE5 291 aaKnown RBP15.51■□□□□ 0.07
CTC1-203ENST00000578240 GPBP1L1Q9HC44 474 aaPredicted RBP15.51■□□□□ 0.07
CTC1-203ENST00000578240 SENP2Q9HC62 589 aa15.51■□□□□ 0.07
CTC1-203ENST00000578240 DTNBO60941 627 aa15.5■□□□□ 0.07
CTC1-203ENST00000578240 PLCD1P51178 756 aa15.5■□□□□ 0.07
CTC1-203ENST00000578240 EVCP57679 992 aa15.5■□□□□ 0.07
CTC1-203ENST00000578240 APOBRQ0VD83 1088 aa15.5■□□□□ 0.07
CTC1-203ENST00000578240 MFSD6Q6ZSS7 791 aa15.5■□□□□ 0.07
CTC1-203ENST00000578240 ZNF526Q8TF50 670 aaPredicted RBP15.5■□□□□ 0.07
CTC1-203ENST00000578240 ZSWIM5Q9P217 1185 aa15.5■□□□□ 0.07
CTC1-203ENST00000578240 SAP30BPQ9UHR5 308 aaKnown RBP15.5■□□□□ 0.07
CTC1-203ENST00000578240 SHTN1A0MZ66 631 aa15.49■□□□□ 0.07
CTC1-203ENST00000578240 SH2B2O14492 632 aaPredicted RBP15.49■□□□□ 0.07
CTC1-203ENST00000578240 ANKRD1Q15327 319 aa15.49■□□□□ 0.07
CTC1-203ENST00000578240 NECAB1Q8N987 351 aa15.49■□□□□ 0.07
CTC1-203ENST00000578240 INTS4Q96HW7 963 aaKnown RBP15.49■□□□□ 0.07
CTC1-203ENST00000578240 CNNM2Q9H8M5 875 aa15.49■□□□□ 0.07
CTC1-203ENST00000578240 SH2B1Q9NRF2 756 aaPredicted RBP15.49■□□□□ 0.07
CTC1-203ENST00000578240 ZNF541Q9H0D2 1346 aa15.48■□□□□ 0.07
CTC1-203ENST00000578240 FZD9O00144 591 aa15.48■□□□□ 0.07
CTC1-203ENST00000578240 ORC4O43929 436 aa15.48■□□□□ 0.07
CTC1-203ENST00000578240 PRDM1O75626 825 aa15.48■□□□□ 0.07
CTC1-203ENST00000578240 CCDC83Q8IWF9 413 aa15.48■□□□□ 0.07
CTC1-203ENST00000578240 IGDCC4Q8TDY8 1250 aa15.48■□□□□ 0.07
CTC1-203ENST00000578240 DYNLL2Q96FJ2 89 aa15.48■□□□□ 0.07
CTC1-203ENST00000578240 KRT23Q9C075 422 aa15.48■□□□□ 0.07
CTC1-203ENST00000578240 USP40Q9NVE5 1235 aa15.48■□□□□ 0.07
CTC1-203ENST00000578240 BRPF3Q9ULD4 1205 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms