RNA–Protein interactions for RNA: ENST00000578134.5

CDK5RAP3-207, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 831 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-207ENST00000578134 USP17L21D6R901 530 aa20.12■□□□□ 0.81
CDK5RAP3-207ENST00000578134 ENTPD3O75355 529 aa20.12■□□□□ 0.81
CDK5RAP3-207ENST00000578134 WDHD1O75717 1129 aaPredicted RBP20.12■□□□□ 0.81
CDK5RAP3-207ENST00000578134 LMOD1P29536 600 aaPredicted RBP20.12■□□□□ 0.81
CDK5RAP3-207ENST00000578134 ANP32AP39687 249 aaKnown RBP20.12■□□□□ 0.81
CDK5RAP3-207ENST00000578134 PPARAQ07869 468 aa20.12■□□□□ 0.81
CDK5RAP3-207ENST00000578134 TRDNQ13061 729 aa20.12■□□□□ 0.81
CDK5RAP3-207ENST00000578134 TTC6Q86TZ1 520 aa20.12■□□□□ 0.81
CDK5RAP3-207ENST00000578134 DHX36Q9H2U1 1008 aaKnown RBP20.12■□□□□ 0.81
CDK5RAP3-207ENST00000578134 CNNM2Q9H8M5 875 aa20.12■□□□□ 0.81
CDK5RAP3-207ENST00000578134 FLT1P17948 1338 aa20.11■□□□□ 0.81
CDK5RAP3-207ENST00000578134 SPDYE2Q495Y8 402 aa20.11■□□□□ 0.81
CDK5RAP3-207ENST00000578134 C12orf60Q5U649 245 aa20.11■□□□□ 0.81
CDK5RAP3-207ENST00000578134 MAPKAPK5Q8IW41 473 aa20.11■□□□□ 0.81
CDK5RAP3-207ENST00000578134 NEK1Q96PY6 1258 aa20.11■□□□□ 0.81
CDK5RAP3-207ENST00000578134 TDRD3Q9H7E2 651 aaKnown RBP20.11■□□□□ 0.81
CDK5RAP3-207ENST00000578134 ZNF287Q9HBT7 754 aa20.11■□□□□ 0.81
CDK5RAP3-207ENST00000578134 ZSWIM6Q9HCJ5 1215 aa20.11■□□□□ 0.81
CDK5RAP3-207ENST00000578134 GLTPD2A6NH11 291 aa20.1■□□□□ 0.81
CDK5RAP3-207ENST00000578134 MINDY4BA8MYZ0 360 aa20.1■□□□□ 0.81
CDK5RAP3-207ENST00000578134 E7EWF7 191 aa20.1■□□□□ 0.81
CDK5RAP3-207ENST00000578134 WNT10BO00744 389 aa20.1■□□□□ 0.81
CDK5RAP3-207ENST00000578134 DDNO94850 711 aaPredicted RBP20.1■□□□□ 0.81
CDK5RAP3-207ENST00000578134 POLR3DP05423 398 aaPredicted RBP20.1■□□□□ 0.81
CDK5RAP3-207ENST00000578134 AKNAD1Q5T1N1 836 aa20.1■□□□□ 0.81
CDK5RAP3-207ENST00000578134 MFSD6Q6ZSS7 791 aa20.1■□□□□ 0.81
CDK5RAP3-207ENST00000578134 L3MBTL3Q96JM7 780 aaPredicted RBP20.1■□□□□ 0.81
CDK5RAP3-207ENST00000578134 ZNF70Q9UC06 446 aaPredicted RBP20.1■□□□□ 0.81
CDK5RAP3-207ENST00000578134 ST18O60284 1047 aa20.09■□□□□ 0.81
CDK5RAP3-207ENST00000578134 FGRP09769 529 aa20.09■□□□□ 0.81
CDK5RAP3-207ENST00000578134 FAM83AQ86UY5 434 aa20.09■□□□□ 0.81
CDK5RAP3-207ENST00000578134 NCOA7Q8NI08 942 aa20.09■□□□□ 0.81
CDK5RAP3-207ENST00000578134 STAG1Q8WVM7 1258 aa20.09■□□□□ 0.81
CDK5RAP3-207ENST00000578134 JAKMIP1Q96N16 626 aaKnown RBP20.09■□□□□ 0.81
CDK5RAP3-207ENST00000578134 KRT23Q9C075 422 aa20.09■□□□□ 0.81
CDK5RAP3-207ENST00000578134 OSBPL5Q9H0X9 879 aaPredicted RBP20.09■□□□□ 0.81
CDK5RAP3-207ENST00000578134 CYP46A1Q9Y6A2 500 aa20.09■□□□□ 0.81
CDK5RAP3-207ENST00000578134 TIAM2Q8IVF5 1701 aa20.09■□□□□ 0.81
CDK5RAP3-207ENST00000578134 HLA-DOAP06340 250 aa20.08■□□□□ 0.81
CDK5RAP3-207ENST00000578134 TNNI2P48788 182 aa20.08■□□□□ 0.81
CDK5RAP3-207ENST00000578134 HAND2P61296 217 aa20.08■□□□□ 0.81
CDK5RAP3-207ENST00000578134 PDE4BQ07343 736 aa20.08■□□□□ 0.81
CDK5RAP3-207ENST00000578134 TNFAIP1Q13829 316 aa20.08■□□□□ 0.81
CDK5RAP3-207ENST00000578134 KIF4BQ2VIQ3 1234 aa20.08■□□□□ 0.81
CDK5RAP3-207ENST00000578134 BLOC1S2Q6QNY1 142 aa20.08■□□□□ 0.81
CDK5RAP3-207ENST00000578134 RUFY3Q7L099 469 aa20.08■□□□□ 0.81
CDK5RAP3-207ENST00000578134 ALDH8A1Q9H2A2 487 aaPredicted RBP20.08■□□□□ 0.81
CDK5RAP3-207ENST00000578134 ADARB2Q9NS39 739 aaKnown RBP20.08■□□□□ 0.81
CDK5RAP3-207ENST00000578134 PCDHAC2Q9Y5I4 1007 aa20.08■□□□□ 0.81
CDK5RAP3-207ENST00000578134 COL2A1P02458 1487 aaPredicted RBP20.07■□□□□ 0.8
CDK5RAP3-207ENST00000578134 MCM2P49736 904 aa20.07■□□□□ 0.8
CDK5RAP3-207ENST00000578134 PICALMQ13492 652 aa20.07■□□□□ 0.8
CDK5RAP3-207ENST00000578134 RALYLQ86SE5 291 aaKnown RBP20.07■□□□□ 0.8
CDK5RAP3-207ENST00000578134 FAM151AQ8WW52 585 aa20.07■□□□□ 0.8
CDK5RAP3-207ENST00000578134 WDR19Q8NEZ3 1342 aa20.06■□□□□ 0.8
CDK5RAP3-207ENST00000578134 CASTP20810 708 aaKnown RBP20.06■□□□□ 0.8
CDK5RAP3-207ENST00000578134 NEK4P51957 841 aa20.06■□□□□ 0.8
CDK5RAP3-207ENST00000578134 NBPF9Q3BBW0 867 aa20.06■□□□□ 0.8
CDK5RAP3-207ENST00000578134 ADCK5Q3MIX3 580 aa20.06■□□□□ 0.8
CDK5RAP3-207ENST00000578134 RBM26Q5T8P6 1007 aaKnown RBP20.06■□□□□ 0.8
CDK5RAP3-207ENST00000578134 DHX32Q7L7V1 743 aaKnown RBP20.06■□□□□ 0.8
CDK5RAP3-207ENST00000578134 SAMD7Q7Z3H4 446 aa20.06■□□□□ 0.8
CDK5RAP3-207ENST00000578134 FOXP4Q8IVH2 680 aaPredicted RBP20.06■□□□□ 0.8
CDK5RAP3-207ENST00000578134 SNX21Q969T3 373 aa20.06■□□□□ 0.8
CDK5RAP3-207ENST00000578134 MTA3Q9BTC8 594 aa20.06■□□□□ 0.8
CDK5RAP3-207ENST00000578134 EHD4Q9H223 541 aa20.06■□□□□ 0.8
CDK5RAP3-207ENST00000578134 DDX4Q9NQI0 724 aaKnown RBP20.06■□□□□ 0.8
CDK5RAP3-207ENST00000578134 PI4KBQ9UBF8 816 aa20.06■□□□□ 0.8
CDK5RAP3-207ENST00000578134 FAM198AQ9UFP1 575 aa20.06■□□□□ 0.8
CDK5RAP3-207ENST00000578134 FOCADQ5VW36 1801 aa20.06■□□□□ 0.8
CDK5RAP3-207ENST00000578134 ROBO3Q96MS0 1386 aa20.06■□□□□ 0.8
CDK5RAP3-207ENST00000578134 ECM29Q5VYK3 1845 aa20.05■□□□□ 0.8
CDK5RAP3-207ENST00000578134 IQCA1LA6NCM1 817 aa20.05■□□□□ 0.8
CDK5RAP3-207ENST00000578134 ORC4O43929 436 aa20.05■□□□□ 0.8
CDK5RAP3-207ENST00000578134 RPS6KB1P23443 525 aa20.05■□□□□ 0.8
CDK5RAP3-207ENST00000578134 EPS15P42566 896 aa20.05■□□□□ 0.8
CDK5RAP3-207ENST00000578134 CTDSPL2Q05D32 466 aa20.05■□□□□ 0.8
CDK5RAP3-207ENST00000578134 NFIAQ12857 509 aa20.05■□□□□ 0.8
CDK5RAP3-207ENST00000578134 TBC1D10BQ4KMP7 808 aaPredicted RBP20.05■□□□□ 0.8
CDK5RAP3-207ENST00000578134 NBPF3Q9H094 633 aa20.05■□□□□ 0.8
CDK5RAP3-207ENST00000578134 SWAP70Q9UH65 585 aa20.05■□□□□ 0.8
CDK5RAP3-207ENST00000578134 HACL1Q9UJ83 578 aa20.05■□□□□ 0.8
CDK5RAP3-207ENST00000578134 SRCAPQ6ZRS2 3230 aa20.04■□□□□ 0.8
CDK5RAP3-207ENST00000578134 LAMA4Q16363 1823 aa20.04■□□□□ 0.8
CDK5RAP3-207ENST00000578134 MCM5P33992 734 aa20.04■□□□□ 0.8
CDK5RAP3-207ENST00000578134 BECN1Q14457 450 aa20.04■□□□□ 0.8
CDK5RAP3-207ENST00000578134 ANKRD1Q15327 319 aa20.04■□□□□ 0.8
CDK5RAP3-207ENST00000578134 STOX1Q6ZVD7 989 aa20.04■□□□□ 0.8
CDK5RAP3-207ENST00000578134 USP50Q70EL3 339 aaPredicted RBP20.04■□□□□ 0.8
CDK5RAP3-207ENST00000578134 TBC1D10CQ8IV04 446 aa20.04■□□□□ 0.8
CDK5RAP3-207ENST00000578134 FBXL16Q8N461 479 aa20.04■□□□□ 0.8
CDK5RAP3-207ENST00000578134 ESR2Q92731 530 aa20.04■□□□□ 0.8
CDK5RAP3-207ENST00000578134 SAP30BPQ9UHR5 308 aaKnown RBP20.04■□□□□ 0.8
CDK5RAP3-207ENST00000578134 ATRNL1Q5VV63 1379 aa20.04■□□□□ 0.8
CDK5RAP3-207ENST00000578134 CDK5RAP2Q96SN8 1893 aa20.03■□□□□ 0.8
CDK5RAP3-207ENST00000578134 SHTN1A0MZ66 631 aa20.03■□□□□ 0.8
CDK5RAP3-207ENST00000578134 CLRN2A0PK11 232 aa20.03■□□□□ 0.8
CDK5RAP3-207ENST00000578134 PLCD1P51178 756 aa20.03■□□□□ 0.8
CDK5RAP3-207ENST00000578134 EXOSC10Q01780 885 aaKnown RBP20.03■□□□□ 0.8
CDK5RAP3-207ENST00000578134 C16orf86Q6ZW13 317 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms