RNA–Protein interactions for RNA: ENST00000577085.1

SF3B3-215, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 529 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-215ENST00000577085 ZFPM1Q8IX07 1006 aa18.97■□□□□ 0.63
SF3B3-215ENST00000577085 ZNF512BQ96KM6 892 aaPredicted RBP18.97■□□□□ 0.63
SF3B3-215ENST00000577085 BCL11AQ9H165 835 aa18.97■□□□□ 0.63
SF3B3-215ENST00000577085 TESPA1A2RU30 521 aaPredicted RBP18.96■□□□□ 0.63
SF3B3-215ENST00000577085 INPP5BP32019 993 aa18.96■□□□□ 0.63
SF3B3-215ENST00000577085 PPATQ06203 517 aa18.96■□□□□ 0.63
SF3B3-215ENST00000577085 EAF2Q96CJ1 260 aaPredicted RBP18.96■□□□□ 0.63
SF3B3-215ENST00000577085 MS4A4AQ96JQ5 239 aa18.96■□□□□ 0.63
SF3B3-215ENST00000577085 ZBTB40Q9NUA8 1239 aa18.96■□□□□ 0.63
SF3B3-215ENST00000577085 TLR7Q9NYK1 1049 aaKnown RBP18.96■□□□□ 0.63
SF3B3-215ENST00000577085 CRHR2Q13324 411 aa18.95■□□□□ 0.62
SF3B3-215ENST00000577085 PPIL2Q13356 520 aa18.95■□□□□ 0.62
SF3B3-215ENST00000577085 PDE3AQ14432 1141 aa18.95■□□□□ 0.62
SF3B3-215ENST00000577085 CLASRPQ8N2M8 674 aaKnown RBP18.95■□□□□ 0.62
SF3B3-215ENST00000577085 BRI3BPQ8WY22 251 aa18.95■□□□□ 0.62
SF3B3-215ENST00000577085 PTPN18Q99952 460 aa18.95■□□□□ 0.62
SF3B3-215ENST00000577085 R3HDMLQ9H3Y0 253 aa18.95■□□□□ 0.62
SF3B3-215ENST00000577085 PICK1Q9NRD5 415 aa18.95■□□□□ 0.62
SF3B3-215ENST00000577085 IRF6O14896 467 aa18.94■□□□□ 0.62
SF3B3-215ENST00000577085 CYP2E1P05181 493 aaPredicted RBP18.94■□□□□ 0.62
SF3B3-215ENST00000577085 PLCG2P16885 1265 aa18.94■□□□□ 0.62
SF3B3-215ENST00000577085 ZAP70P43403 619 aa18.94■□□□□ 0.62
SF3B3-215ENST00000577085 TAF1CQ15572 869 aaPredicted RBP18.94■□□□□ 0.62
SF3B3-215ENST00000577085 TEX11Q8IYF3 940 aa18.94■□□□□ 0.62
SF3B3-215ENST00000577085 RHPN1Q8TCX5 695 aa18.94■□□□□ 0.62
SF3B3-215ENST00000577085 KIF1BPQ96EK5 621 aa18.94■□□□□ 0.62
SF3B3-215ENST00000577085 ZFYVE28Q9HCC9 887 aa18.94■□□□□ 0.62
SF3B3-215ENST00000577085 IL1RAPL2Q9NP60 686 aa18.94■□□□□ 0.62
SF3B3-215ENST00000577085 DDX4Q9NQI0 724 aaKnown RBP18.94■□□□□ 0.62
SF3B3-215ENST00000577085 ZNF112Q9UJU3 913 aa18.94■□□□□ 0.62
SF3B3-215ENST00000577085 IGSF3O75054 1194 aa18.93■□□□□ 0.62
SF3B3-215ENST00000577085 IFIT2P09913 472 aaKnown RBP18.93■□□□□ 0.62
SF3B3-215ENST00000577085 RHBDL3P58872 404 aa18.93■□□□□ 0.62
SF3B3-215ENST00000577085 ZNF384Q8TF68 577 aa18.93■□□□□ 0.62
SF3B3-215ENST00000577085 ERO1AQ96HE7 468 aa18.93■□□□□ 0.62
SF3B3-215ENST00000577085 AATFQ9NY61 560 aaKnown RBP eCLIP18.93■□□□□ 0.62
SF3B3-215ENST00000577085 LAMB1P07942 1786 aa18.93■□□□□ 0.62
SF3B3-215ENST00000577085 RFX7Q2KHR2 1363 aa18.93■□□□□ 0.62
SF3B3-215ENST00000577085 DDTLA6NHG4 134 aaPredicted RBP18.92■□□□□ 0.62
SF3B3-215ENST00000577085 NPM3O75607 178 aaKnown RBP18.92■□□□□ 0.62
SF3B3-215ENST00000577085 IDH1O75874 414 aaKnown RBP18.92■□□□□ 0.62
SF3B3-215ENST00000577085 NOL9Q5SY16 702 aaKnown RBP18.92■□□□□ 0.62
SF3B3-215ENST00000577085 DOCK2Q92608 1830 aa18.91■□□□□ 0.62
SF3B3-215ENST00000577085 RAB11FIP3O75154 756 aa18.91■□□□□ 0.62
SF3B3-215ENST00000577085 SP3Q02447 781 aa18.91■□□□□ 0.62
SF3B3-215ENST00000577085 C20orf194Q5TEA3 1177 aa18.91■□□□□ 0.62
SF3B3-215ENST00000577085 SH3BP5LQ7L8J4 393 aa18.91■□□□□ 0.62
SF3B3-215ENST00000577085 SCYL3Q8IZE3 742 aa18.91■□□□□ 0.62
SF3B3-215ENST00000577085 FAM43AQ8N2R8 423 aa18.91■□□□□ 0.62
SF3B3-215ENST00000577085 SH3RF3Q8TEJ3 882 aaPredicted RBP18.91■□□□□ 0.62
SF3B3-215ENST00000577085 OSBPL5Q9H0X9 879 aaPredicted RBP18.91■□□□□ 0.62
SF3B3-215ENST00000577085 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.91■□□□□ 0.62
SF3B3-215ENST00000577085 PIH1D3Q9NQM4 214 aaKnown RBP18.91■□□□□ 0.62
SF3B3-215ENST00000577085 TRIM17Q9Y577 477 aa18.91■□□□□ 0.62
SF3B3-215ENST00000577085 MAP3K12Q12852 859 aa18.9■□□□□ 0.62
SF3B3-215ENST00000577085 ARHGEF6Q15052 776 aa18.9■□□□□ 0.62
SF3B3-215ENST00000577085 TRIM34Q9BYJ4 488 aa18.9■□□□□ 0.62
SF3B3-215ENST00000577085 ZCCHC17Q9NP64 241 aaKnown RBP18.9■□□□□ 0.62
SF3B3-215ENST00000577085 MAST2Q6P0Q8 1798 aa18.9■□□□□ 0.62
SF3B3-215ENST00000577085 BTBD19C9JJ37 291 aa18.89■□□□□ 0.61
SF3B3-215ENST00000577085 CYP7A1P22680 504 aa18.89■□□□□ 0.61
SF3B3-215ENST00000577085 TTF1Q15361 905 aaPredicted RBP18.89■□□□□ 0.61
SF3B3-215ENST00000577085 FBXO46Q6PJ61 603 aaPredicted RBP18.89■□□□□ 0.61
SF3B3-215ENST00000577085 HPS5Q9UPZ3 1129 aa18.89■□□□□ 0.61
SF3B3-215ENST00000577085 ZHX2Q9Y6X8 837 aa18.89■□□□□ 0.61
SF3B3-215ENST00000577085 ATRNL1Q5VV63 1379 aa18.89■□□□□ 0.61
SF3B3-215ENST00000577085 PHF20L1A8MW92 1017 aa18.88■□□□□ 0.61
SF3B3-215ENST00000577085 CTNND1O60716 968 aaKnown RBP18.88■□□□□ 0.61
SF3B3-215ENST00000577085 CERS3Q8IU89 383 aa18.88■□□□□ 0.61
SF3B3-215ENST00000577085 SIRT2Q8IXJ6 389 aa18.88■□□□□ 0.61
SF3B3-215ENST00000577085 MAGEB6Q8N7X4 407 aa18.88■□□□□ 0.61
SF3B3-215ENST00000577085 CD99L2Q8TCZ2 262 aa18.88■□□□□ 0.61
SF3B3-215ENST00000577085 TGFBRAP1Q8WUH2 860 aa18.88■□□□□ 0.61
SF3B3-215ENST00000577085 DHX36Q9H2U1 1008 aaKnown RBP18.88■□□□□ 0.61
SF3B3-215ENST00000577085 NDUFB9Q9Y6M9 179 aa18.88■□□□□ 0.61
SF3B3-215ENST00000577085 TBC1D12O60347 775 aa18.87■□□□□ 0.61
SF3B3-215ENST00000577085 PTPRAP18433 802 aa18.87■□□□□ 0.61
SF3B3-215ENST00000577085 PPP4CP60510 307 aa18.87■□□□□ 0.61
SF3B3-215ENST00000577085 MAP3K10Q02779 954 aa18.87■□□□□ 0.61
SF3B3-215ENST00000577085 KIF22Q14807 665 aa18.87■□□□□ 0.61
SF3B3-215ENST00000577085 YTHDC1Q96MU7 727 aaKnown RBP18.87■□□□□ 0.61
SF3B3-215ENST00000577085 EFCC1Q9HA90 598 aa18.87■□□□□ 0.61
SF3B3-215ENST00000577085 KCNH4Q9UQ05 1017 aa18.87■□□□□ 0.61
SF3B3-215ENST00000577085 COL2A1P02458 1487 aaPredicted RBP18.86■□□□□ 0.61
SF3B3-215ENST00000577085 PDHXO00330 501 aa18.86■□□□□ 0.61
SF3B3-215ENST00000577085 CXCL11O14625 94 aa18.86■□□□□ 0.61
SF3B3-215ENST00000577085 TMED8Q6PL24 325 aaPredicted RBP18.86■□□□□ 0.61
SF3B3-215ENST00000577085 FASTKD5Q7L8L6 764 aaKnown RBP18.86■□□□□ 0.61
SF3B3-215ENST00000577085 OTOP1Q7RTM1 612 aa18.86■□□□□ 0.61
SF3B3-215ENST00000577085 ANKRD23Q86SG2 305 aa18.86■□□□□ 0.61
SF3B3-215ENST00000577085 ADGRA1Q86SQ6 560 aa18.86■□□□□ 0.61
SF3B3-215ENST00000577085 MAPKAPK5Q8IW41 473 aa18.86■□□□□ 0.61
SF3B3-215ENST00000577085 CRACR2BQ8N4Y2 399 aaPredicted RBP18.86■□□□□ 0.61
SF3B3-215ENST00000577085 MIGA1Q8NAN2 632 aa18.86■□□□□ 0.61
SF3B3-215ENST00000577085 DNAJC2Q99543 621 aaKnown RBP18.86■□□□□ 0.61
SF3B3-215ENST00000577085 PI4KBQ9UBF8 816 aa18.86■□□□□ 0.61
SF3B3-215ENST00000577085 HERC5Q9UII4 1024 aaKnown RBP18.86■□□□□ 0.61
SF3B3-215ENST00000577085 FLT1P17948 1338 aa18.85■□□□□ 0.61
SF3B3-215ENST00000577085 FAM196BA6NMK8 535 aa18.85■□□□□ 0.61
SF3B3-215ENST00000577085 TLR2O60603 784 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms