RNA–Protein interactions for RNA: ENST00000576348.1

ERCC4-208, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 2

Gene ERCC4, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-208ENST00000576348 SAMD7Q7Z3H4 446 aa19.57■□□□□ 0.72
ERCC4-208ENST00000576348 RALYLQ86SE5 291 aaKnown RBP19.57■□□□□ 0.72
ERCC4-208ENST00000576348 ZSCAN29Q8IWY8 852 aaPredicted RBP19.57■□□□□ 0.72
ERCC4-208ENST00000576348 KCNB2Q92953 911 aa19.57■□□□□ 0.72
ERCC4-208ENST00000576348 RNF41Q9H4P4 317 aaPredicted RBP19.57■□□□□ 0.72
ERCC4-208ENST00000576348 RBM19Q9Y4C8 960 aaKnown RBP19.57■□□□□ 0.72
ERCC4-208ENST00000576348 PSME4Q14997 1843 aa19.57■□□□□ 0.72
ERCC4-208ENST00000576348 WNT10BO00744 389 aa19.56■□□□□ 0.72
ERCC4-208ENST00000576348 HLA-DOAP06340 250 aa19.56■□□□□ 0.72
ERCC4-208ENST00000576348 TNNI2P48788 182 aa19.56■□□□□ 0.72
ERCC4-208ENST00000576348 SLC4A8Q2Y0W8 1093 aa19.56■□□□□ 0.72
ERCC4-208ENST00000576348 SPDYE2Q495Y8 402 aa19.56■□□□□ 0.72
ERCC4-208ENST00000576348 SBK1Q52WX2 424 aa19.56■□□□□ 0.72
ERCC4-208ENST00000576348 TTC6Q86TZ1 520 aa19.56■□□□□ 0.72
ERCC4-208ENST00000576348 TOMM22Q9NS69 142 aa19.56■□□□□ 0.72
ERCC4-208ENST00000576348 MYH2Q9UKX2 1941 aa19.55■□□□□ 0.72
ERCC4-208ENST00000576348 GLTPD2A6NH11 291 aa19.55■□□□□ 0.72
ERCC4-208ENST00000576348 TCP10L2B9ZVM9 353 aa19.55■□□□□ 0.72
ERCC4-208ENST00000576348 E7EWF7 191 aa19.55■□□□□ 0.72
ERCC4-208ENST00000576348 CYP2D6P10635 497 aa19.55■□□□□ 0.72
ERCC4-208ENST00000576348 CASTP20810 708 aaKnown RBP19.55■□□□□ 0.72
ERCC4-208ENST00000576348 EPS15P42566 896 aa19.55■□□□□ 0.72
ERCC4-208ENST00000576348 CTDSPL2Q05D32 466 aa19.55■□□□□ 0.72
ERCC4-208ENST00000576348 TCP10Q12799 353 aa19.55■□□□□ 0.72
ERCC4-208ENST00000576348 NFIAQ12857 509 aa19.55■□□□□ 0.72
ERCC4-208ENST00000576348 NBPF9Q3BBW0 867 aa19.55■□□□□ 0.72
ERCC4-208ENST00000576348 TSGA10IPQ3SY00 556 aa19.55■□□□□ 0.72
ERCC4-208ENST00000576348 MFSD6Q6ZSS7 791 aa19.55■□□□□ 0.72
ERCC4-208ENST00000576348 STK11IPQ8N1F8 1099 aa19.55■□□□□ 0.72
ERCC4-208ENST00000576348 IDI2Q9BXS1 227 aa19.55■□□□□ 0.72
ERCC4-208ENST00000576348 TRIM34Q9BYJ4 488 aa19.55■□□□□ 0.72
ERCC4-208ENST00000576348 OSBPL5Q9H0X9 879 aaPredicted RBP19.55■□□□□ 0.72
ERCC4-208ENST00000576348 ADARB2Q9NS39 739 aaKnown RBP19.55■□□□□ 0.72
ERCC4-208ENST00000576348 TIAM2Q8IVF5 1701 aa19.54■□□□□ 0.72
ERCC4-208ENST00000576348 CYP2D7A0A087X1C5 515 aa19.54■□□□□ 0.72
ERCC4-208ENST00000576348 ENTPD3O75355 529 aa19.54■□□□□ 0.72
ERCC4-208ENST00000576348 TNFAIP1Q13829 316 aa19.54■□□□□ 0.72
ERCC4-208ENST00000576348 BLOC1S2Q6QNY1 142 aa19.54■□□□□ 0.72
ERCC4-208ENST00000576348 ZBED3Q96IU2 234 aaPredicted RBP19.54■□□□□ 0.72
ERCC4-208ENST00000576348 NEK1Q96PY6 1258 aa19.54■□□□□ 0.72
ERCC4-208ENST00000576348 CNNM2Q9H8M5 875 aa19.54■□□□□ 0.72
ERCC4-208ENST00000576348 DDX4Q9NQI0 724 aaKnown RBP19.54■□□□□ 0.72
ERCC4-208ENST00000576348 HACL1Q9UJ83 578 aa19.54■□□□□ 0.72
ERCC4-208ENST00000576348 ANAPC4Q9UJX5 808 aa19.54■□□□□ 0.72
ERCC4-208ENST00000576348 CYP46A1Q9Y6A2 500 aa19.54■□□□□ 0.72
ERCC4-208ENST00000576348 ZNF646O15015 1829 aaPredicted RBP19.53■□□□□ 0.72
ERCC4-208ENST00000576348 IQCA1LA6NCM1 817 aa19.53■□□□□ 0.72
ERCC4-208ENST00000576348 ST18O60284 1047 aa19.53■□□□□ 0.72
ERCC4-208ENST00000576348 NPM3O75607 178 aaKnown RBP19.53■□□□□ 0.72
ERCC4-208ENST00000576348 HMGB1P09429 215 aaKnown RBP19.53■□□□□ 0.72
ERCC4-208ENST00000576348 PDE4BQ07343 736 aa19.53■□□□□ 0.72
ERCC4-208ENST00000576348 RRP12Q5JTH9 1297 aaKnown RBP19.53■□□□□ 0.72
ERCC4-208ENST00000576348 AKNAD1Q5T1N1 836 aa19.53■□□□□ 0.72
ERCC4-208ENST00000576348 C12orf60Q5U649 245 aa19.53■□□□□ 0.72
ERCC4-208ENST00000576348 FKBP1CQ5VVH2 108 aa19.53■□□□□ 0.72
ERCC4-208ENST00000576348 TBC1D10CQ8IV04 446 aa19.53■□□□□ 0.72
ERCC4-208ENST00000576348 NCOA7Q8NI08 942 aa19.53■□□□□ 0.72
ERCC4-208ENST00000576348 L3MBTL3Q96JM7 780 aaPredicted RBP19.53■□□□□ 0.72
ERCC4-208ENST00000576348 TM6SF1Q9BZW5 370 aa19.53■□□□□ 0.72
ERCC4-208ENST00000576348 KRT23Q9C075 422 aa19.53■□□□□ 0.72
ERCC4-208ENST00000576348 DHX36Q9H2U1 1008 aaKnown RBP19.53■□□□□ 0.72
ERCC4-208ENST00000576348 ZNF287Q9HBT7 754 aa19.53■□□□□ 0.72
ERCC4-208ENST00000576348 FAM198AQ9UFP1 575 aa19.53■□□□□ 0.72
ERCC4-208ENST00000576348 MKRN1Q9UHC7 482 aaKnown RBP19.53■□□□□ 0.72
ERCC4-208ENST00000576348 EGFRP00533 1210 aa19.52■□□□□ 0.72
ERCC4-208ENST00000576348 NEK4P51957 841 aa19.52■□□□□ 0.72
ERCC4-208ENST00000576348 FGD1P98174 961 aa19.52■□□□□ 0.72
ERCC4-208ENST00000576348 CRACR2BQ8N4Y2 399 aaPredicted RBP19.52■□□□□ 0.72
ERCC4-208ENST00000576348 TRPM4Q8TD43 1214 aa19.52■□□□□ 0.72
ERCC4-208ENST00000576348 STAG1Q8WVM7 1258 aa19.52■□□□□ 0.72
ERCC4-208ENST00000576348 UPF3BQ9BZI7 483 aaKnown RBP19.52■□□□□ 0.72
ERCC4-208ENST00000576348 TAF6LQ9Y6J9 622 aa19.52■□□□□ 0.72
ERCC4-208ENST00000576348 DICER1Q9UPY3 1922 aaKnown RBP19.52■□□□□ 0.72
ERCC4-208ENST00000576348 SBF1O95248 1867 aa19.52■□□□□ 0.71
ERCC4-208ENST00000576348 PCP11498 1178 aaKnown RBP19.51■□□□□ 0.71
ERCC4-208ENST00000576348 ADCK5Q3MIX3 580 aa19.51■□□□□ 0.71
ERCC4-208ENST00000576348 APOBEC3FQ8IUX4 373 aaKnown RBP19.51■□□□□ 0.71
ERCC4-208ENST00000576348 KIF2CQ99661 725 aa19.51■□□□□ 0.71
ERCC4-208ENST00000576348 MKNK2Q9HBH9 465 aa19.51■□□□□ 0.71
ERCC4-208ENST00000576348 ADAMTSL1Q8N6G6 1762 aa19.5■□□□□ 0.71
ERCC4-208ENST00000576348 STOX1Q6ZVD7 989 aa19.5■□□□□ 0.71
ERCC4-208ENST00000576348 FAM83AQ86UY5 434 aa19.5■□□□□ 0.71
ERCC4-208ENST00000576348 IL27Q8NEV9 243 aa19.5■□□□□ 0.71
ERCC4-208ENST00000576348 FAM151AQ8WW52 585 aa19.5■□□□□ 0.71
ERCC4-208ENST00000576348 IL17RAQ96F46 866 aa19.5■□□□□ 0.71
ERCC4-208ENST00000576348 ZSWIM6Q9HCJ5 1215 aa19.5■□□□□ 0.71
ERCC4-208ENST00000576348 EPHX2P34913 555 aa19.49■□□□□ 0.71
ERCC4-208ENST00000576348 ANGEL2Q5VTE6 544 aaKnown RBP19.49■□□□□ 0.71
ERCC4-208ENST00000576348 RUFY3Q7L099 469 aa19.49■□□□□ 0.71
ERCC4-208ENST00000576348 ZFPM1Q8IX07 1006 aa19.49■□□□□ 0.71
ERCC4-208ENST00000576348 ESR2Q92731 530 aa19.49■□□□□ 0.71
ERCC4-208ENST00000576348 NBPF3Q9H094 633 aa19.49■□□□□ 0.71
ERCC4-208ENST00000576348 PDRG1Q9NUG6 133 aa19.49■□□□□ 0.71
ERCC4-208ENST00000576348 PI4KBQ9UBF8 816 aa19.49■□□□□ 0.71
ERCC4-208ENST00000576348 B4E1Z4 1266 aa19.48■□□□□ 0.71
ERCC4-208ENST00000576348 CPA1P15085 419 aa19.48■□□□□ 0.71
ERCC4-208ENST00000576348 RPS6KB1P23443 525 aa19.48■□□□□ 0.71
ERCC4-208ENST00000576348 MCM5P33992 734 aa19.48■□□□□ 0.71
ERCC4-208ENST00000576348 PLCD1P51178 756 aa19.48■□□□□ 0.71
ERCC4-208ENST00000576348 BECN1Q14457 450 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms