RNA–Protein interactions for RNA: ENST00000575709.5

USP6-206, Transcript of ubiquitin specific peptidase 6, humanhuman

TSL 2

Gene USP6, Length 8,185 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6-206ENST00000575709 DCAF17Q5H9S7 520 aaPredicted RBP11.72□□□□□ -0.53
USP6-206ENST00000575709 FAM186BQ8IYM0 893 aa11.72□□□□□ -0.53
USP6-206ENST00000575709 SCYL3Q8IZE3 742 aa11.72□□□□□ -0.53
USP6-206ENST00000575709 ST13P4Q8IZP2 240 aaPredicted RBP11.72□□□□□ -0.53
USP6-206ENST00000575709 CCDC124Q96CT7 223 aaKnown RBP11.72□□□□□ -0.53
USP6-206ENST00000575709 GGNBP2Q9H3C7 697 aa11.72□□□□□ -0.53
USP6-206ENST00000575709 SPG7Q9UQ90 795 aa11.72□□□□□ -0.53
USP6-206ENST00000575709 ARHGAP4P98171 946 aa11.71□□□□□ -0.53
USP6-206ENST00000575709 SND1Q7KZF4 910 aaKnown RBP eCLIP11.71□□□□□ -0.53
USP6-206ENST00000575709 GLRX3O76003 335 aaKnown RBP11.71□□□□□ -0.53
USP6-206ENST00000575709 SLC9A5Q14940 896 aa11.71□□□□□ -0.53
USP6-206ENST00000575709 CCDC85BQ15834 202 aaPredicted RBP11.71□□□□□ -0.53
USP6-206ENST00000575709 MSANTD4Q8NCY6 345 aa11.71□□□□□ -0.53
USP6-206ENST00000575709 PRKAR2BP31323 418 aa11.71□□□□□ -0.53
USP6-206ENST00000575709 TUBB2AQ13885 445 aa11.71□□□□□ -0.53
USP6-206ENST00000575709 RCN2Q14257 317 aa11.71□□□□□ -0.53
USP6-206ENST00000575709 UBE3BQ7Z3V4 1068 aa11.71□□□□□ -0.53
USP6-206ENST00000575709 GAS2L2Q8NHY3 880 aa11.71□□□□□ -0.53
USP6-206ENST00000575709 TUBB2BQ9BVA1 445 aa11.71□□□□□ -0.53
USP6-206ENST00000575709 NPR1P16066 1061 aa11.71□□□□□ -0.53
USP6-206ENST00000575709 CTNNA1P35221 906 aaKnown RBP11.71□□□□□ -0.53
USP6-206ENST00000575709 KRT80Q6KB66 452 aa11.71□□□□□ -0.53
USP6-206ENST00000575709 PNISRQ8TF01 805 aaKnown RBP11.71□□□□□ -0.53
USP6-206ENST00000575709 ATP6V0A1Q93050 837 aa11.71□□□□□ -0.53
USP6-206ENST00000575709 SH3GL2Q99962 352 aa11.71□□□□□ -0.53
USP6-206ENST00000575709 ORC3Q9UBD5 711 aaPredicted RBP11.71□□□□□ -0.53
USP6-206ENST00000575709 GOLGA8KD6RF30 607 aa11.71□□□□□ -0.54
USP6-206ENST00000575709 PSMD2Q13200 908 aa11.71□□□□□ -0.54
USP6-206ENST00000575709 DHX58Q96C10 678 aa11.71□□□□□ -0.54
USP6-206ENST00000575709 MCF2P10911 925 aa11.71□□□□□ -0.54
USP6-206ENST00000575709 DYDC2Q96IM9 177 aa11.71□□□□□ -0.54
USP6-206ENST00000575709 SMG6Q86US8 1419 aaKnown RBP11.71□□□□□ -0.54
USP6-206ENST00000575709 DNAJC6O75061 913 aa11.71□□□□□ -0.54
USP6-206ENST00000575709 MRPL28Q13084 256 aaKnown RBP11.71□□□□□ -0.54
USP6-206ENST00000575709 MRPS27Q92552 414 aaKnown RBP11.71□□□□□ -0.54
USP6-206ENST00000575709 SH2D4AQ9H788 454 aa11.71□□□□□ -0.54
USP6-206ENST00000575709 DIABLOQ9NR28 239 aa11.71□□□□□ -0.54
USP6-206ENST00000575709 CARSP49589 748 aaKnown RBP11.7□□□□□ -0.54
USP6-206ENST00000575709 OCA2Q04671 838 aa11.7□□□□□ -0.54
USP6-206ENST00000575709 TEKT2Q9UIF3 430 aa11.7□□□□□ -0.54
USP6-206ENST00000575709 POTEB3A0JP26 581 aa11.7□□□□□ -0.54
USP6-206ENST00000575709 POTEBQ6S5H4 581 aa11.7□□□□□ -0.54
USP6-206ENST00000575709 TRMT10CQ7L0Y3 403 aaKnown RBP11.7□□□□□ -0.54
USP6-206ENST00000575709 PHF23Q9BUL5 403 aaPredicted RBP11.7□□□□□ -0.54
USP6-206ENST00000575709 CYP26C1Q6V0L0 522 aa11.7□□□□□ -0.54
USP6-206ENST00000575709 GABPB2Q8TAK5 448 aaPredicted RBP11.7□□□□□ -0.54
USP6-206ENST00000575709 KIF1BPQ96EK5 621 aa11.7□□□□□ -0.54
USP6-206ENST00000575709 COPG1Q9Y678 874 aaKnown RBP11.7□□□□□ -0.54
USP6-206ENST00000575709 MAD1L1Q9Y6D9 718 aa11.7□□□□□ -0.54
USP6-206ENST00000575709 MIA2Q96PC5 1412 aa11.7□□□□□ -0.54
USP6-206ENST00000575709 BLVRAP53004 296 aa11.7□□□□□ -0.54
USP6-206ENST00000575709 DNM1Q05193 864 aaKnown RBP11.7□□□□□ -0.54
USP6-206ENST00000575709 LONRF3Q496Y0 759 aa11.7□□□□□ -0.54
USP6-206ENST00000575709 METTL24Q5JXM2 366 aa11.7□□□□□ -0.54
USP6-206ENST00000575709 HEATR3Q7Z4Q2 680 aa11.7□□□□□ -0.54
USP6-206ENST00000575709 TRIML2Q8N7C3 387 aa11.7□□□□□ -0.54
USP6-206ENST00000575709 RPGRQ92834 1020 aaKnown RBP11.7□□□□□ -0.54
USP6-206ENST00000575709 VPS37BQ9H9H4 285 aa11.7□□□□□ -0.54
USP6-206ENST00000575709 BCL2L12Q9HB09 334 aa11.69□□□□□ -0.54
USP6-206ENST00000575709 VPS8Q8N3P4 1428 aa11.69□□□□□ -0.54
USP6-206ENST00000575709 NACADO15069 1562 aa11.69□□□□□ -0.54
USP6-206ENST00000575709 CAPN11Q9UMQ6 739 aa11.69□□□□□ -0.54
USP6-206ENST00000575709 ASZ1Q8WWH4 475 aa11.69□□□□□ -0.54
USP6-206ENST00000575709 TXLNGQ9NUQ3 528 aa11.69□□□□□ -0.54
USP6-206ENST00000575709 WWC3Q9ULE0 1092 aa11.69□□□□□ -0.54
USP6-206ENST00000575709 SKIP12755 728 aa11.69□□□□□ -0.54
USP6-206ENST00000575709 NECAB1Q8N987 351 aa11.69□□□□□ -0.54
USP6-206ENST00000575709 TTLL11Q8NHH1 800 aa11.69□□□□□ -0.54
USP6-206ENST00000575709 ERMNQ8TAM6 284 aa11.69□□□□□ -0.54
USP6-206ENST00000575709 IFT122Q9HBG6 1241 aa11.69□□□□□ -0.54
USP6-206ENST00000575709 CTNND2Q9UQB3 1225 aa11.69□□□□□ -0.54
USP6-206ENST00000575709 DAPK3O43293 454 aa11.69□□□□□ -0.54
USP6-206ENST00000575709 GSTA1P08263 222 aa11.69□□□□□ -0.54
USP6-206ENST00000575709 PDHA1P08559 390 aa11.69□□□□□ -0.54
USP6-206ENST00000575709 GSTA2P09210 222 aa11.69□□□□□ -0.54
USP6-206ENST00000575709 ZC3H18Q86VM9 953 aaKnown RBP11.68□□□□□ -0.54
USP6-206ENST00000575709 NOX5Q96PH1 765 aa11.68□□□□□ -0.54
USP6-206ENST00000575709 KRT12Q99456 494 aa11.68□□□□□ -0.54
USP6-206ENST00000575709 HLA-DPA1P20036 260 aa11.68□□□□□ -0.54
USP6-206ENST00000575709 DYNC1I2Q13409 638 aaKnown RBP11.68□□□□□ -0.54
USP6-206ENST00000575709 ZNF229Q9UJW7 825 aa11.68□□□□□ -0.54
USP6-206ENST00000575709 SART1O43290 800 aaKnown RBP11.68□□□□□ -0.54
USP6-206ENST00000575709 DKC1O60832 514 aaKnown RBP eCLIP11.68□□□□□ -0.54
USP6-206ENST00000575709 SLC12A2P55011 1212 aa11.68□□□□□ -0.54
USP6-206ENST00000575709 BASP1P80723 227 aaKnown RBP11.68□□□□□ -0.54
USP6-206ENST00000575709 TBC1D9Q6ZT07 1266 aa11.68□□□□□ -0.54
USP6-206ENST00000575709 POLE3Q9NRF9 147 aa11.68□□□□□ -0.54
USP6-206ENST00000575709 WRNQ14191 1432 aaPredicted RBP eCLIP11.68□□□□□ -0.54
USP6-206ENST00000575709 KIF1CO43896 1103 aaKnown RBP11.68□□□□□ -0.54
USP6-206ENST00000575709 PDE6AP16499 860 aa11.68□□□□□ -0.54
USP6-206ENST00000575709 CCDC105Q8IYK2 499 aa11.68□□□□□ -0.54
USP6-206ENST00000575709 IFIT1P09914 478 aaKnown RBP11.68□□□□□ -0.54
USP6-206ENST00000575709 SNX1Q13596 522 aa11.68□□□□□ -0.54
USP6-206ENST00000575709 G3BP2Q9UN86 482 aaKnown RBP11.68□□□□□ -0.54
USP6-206ENST00000575709 STRIP2Q9ULQ0 834 aa11.68□□□□□ -0.54
USP6-206ENST00000575709 DCLK2Q8N568 766 aa11.67□□□□□ -0.54
USP6-206ENST00000575709 C6orf203Q9P0P8 240 aaPredicted RBP11.67□□□□□ -0.54
USP6-206ENST00000575709 IGHMBP2P38935 993 aaKnown RBP11.67□□□□□ -0.54
USP6-206ENST00000575709 SCYL1Q96KG9 808 aa11.67□□□□□ -0.54
USP6-206ENST00000575709 CFAP221Q4G0U5 840 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms