RNA–Protein interactions for RNA: ENST00000575168.1

CXCL16-204, Transcript of C-X-C motif chemokine ligand 16, humanhuman

TSL 5

Gene CXCL16, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL16-204ENST00000575168 DSCC1Q9BVC3 393 aa14.85□□□□□ -0.03
CXCL16-204ENST00000575168 NAPBQ9H115 298 aa14.85□□□□□ -0.03
CXCL16-204ENST00000575168 ZNF287Q9HBT7 754 aa14.85□□□□□ -0.03
CXCL16-204ENST00000575168 POLR2AP24928 1970 aaKnown RBP14.85□□□□□ -0.03
CXCL16-204ENST00000575168 ADAMTSL1Q8N6G6 1762 aa14.85□□□□□ -0.03
CXCL16-204ENST00000575168 MYH1P12882 1939 aa14.84□□□□□ -0.03
CXCL16-204ENST00000575168 COL2A1P02458 1487 aaPredicted RBP14.84□□□□□ -0.03
CXCL16-204ENST00000575168 WDHD1O75717 1129 aaPredicted RBP14.84□□□□□ -0.03
CXCL16-204ENST00000575168 EGFRP00533 1210 aa14.84□□□□□ -0.03
CXCL16-204ENST00000575168 POLR3DP05423 398 aaPredicted RBP14.84□□□□□ -0.03
CXCL16-204ENST00000575168 ALX1Q15699 326 aa14.84□□□□□ -0.03
CXCL16-204ENST00000575168 ZNF784Q8NCA9 323 aaPredicted RBP14.84□□□□□ -0.03
CXCL16-204ENST00000575168 SMC1BQ8NDV3 1235 aa14.84□□□□□ -0.03
CXCL16-204ENST00000575168 SEC62Q99442 399 aaKnown RBP14.84□□□□□ -0.03
CXCL16-204ENST00000575168 DEFB129Q9H1M3 183 aa14.84□□□□□ -0.03
CXCL16-204ENST00000575168 MCM9Q9NXL9 1143 aa14.84□□□□□ -0.03
CXCL16-204ENST00000575168 ARPP21Q9UBL0 812 aaPredicted RBP14.84□□□□□ -0.03
CXCL16-204ENST00000575168 ZMYM6O95789 1325 aa14.84□□□□□ -0.03
CXCL16-204ENST00000575168 CDK5RAP2Q96SN8 1893 aa14.84□□□□□ -0.03
CXCL16-204ENST00000575168 TOMM70O94826 608 aa14.83□□□□□ -0.04
CXCL16-204ENST00000575168 HSPD1P10809 573 aaKnown RBP14.83□□□□□ -0.04
CXCL16-204ENST00000575168 MCCP23508 829 aa14.83□□□□□ -0.04
CXCL16-204ENST00000575168 RASA3Q14644 834 aa14.83□□□□□ -0.04
CXCL16-204ENST00000575168 DCAF15Q66K64 600 aa14.83□□□□□ -0.04
CXCL16-204ENST00000575168 MAPKAPK5Q8IW41 473 aa14.83□□□□□ -0.04
CXCL16-204ENST00000575168 IFNL3Q8IZI9 196 aa14.83□□□□□ -0.04
CXCL16-204ENST00000575168 OSBPL5Q9H0X9 879 aaPredicted RBP14.83□□□□□ -0.04
CXCL16-204ENST00000575168 UPF2Q9HAU5 1272 aaKnown RBP14.83□□□□□ -0.04
CXCL16-204ENST00000575168 ANO2Q9NQ90 1003 aa14.83□□□□□ -0.04
CXCL16-204ENST00000575168 PCDHAC2Q9Y5I4 1007 aa14.83□□□□□ -0.04
CXCL16-204ENST00000575168 U3KPZ7 1027 aaPredicted RBP14.83□□□□□ -0.04
CXCL16-204ENST00000575168 FLT1P17948 1338 aa14.83□□□□□ -0.04
CXCL16-204ENST00000575168 NAV1Q8NEY1 1877 aa14.82□□□□□ -0.04
CXCL16-204ENST00000575168 GSG1L2A8MUP6 293 aa14.82□□□□□ -0.04
CXCL16-204ENST00000575168 CACNB3P54284 484 aa14.82□□□□□ -0.04
CXCL16-204ENST00000575168 TCP10Q12799 353 aa14.82□□□□□ -0.04
CXCL16-204ENST00000575168 SLFNL1Q499Z3 407 aa14.82□□□□□ -0.04
CXCL16-204ENST00000575168 RNF20Q5VTR2 975 aa14.82□□□□□ -0.04
CXCL16-204ENST00000575168 CCDC129Q6ZRS4 1044 aa14.82□□□□□ -0.04
CXCL16-204ENST00000575168 FOXP4Q8IVH2 680 aaPredicted RBP14.82□□□□□ -0.04
CXCL16-204ENST00000575168 RBM46Q8TBY0 533 aaKnown RBP14.82□□□□□ -0.04
CXCL16-204ENST00000575168 SDR42E1Q8WUS8 393 aa14.82□□□□□ -0.04
CXCL16-204ENST00000575168 DCP1AQ9NPI6 582 aaPredicted RBP14.82□□□□□ -0.04
CXCL16-204ENST00000575168 PI4KBQ9UBF8 816 aa14.82□□□□□ -0.04
CXCL16-204ENST00000575168 NT5C2P49902 561 aa14.81□□□□□ -0.04
CXCL16-204ENST00000575168 FSTL1Q12841 308 aa14.81□□□□□ -0.04
CXCL16-204ENST00000575168 IMMTQ16891 758 aaKnown RBP14.81□□□□□ -0.04
CXCL16-204ENST00000575168 SBK1Q52WX2 424 aa14.81□□□□□ -0.04
CXCL16-204ENST00000575168 ZNF589Q86UQ0 364 aaPredicted RBP14.81□□□□□ -0.04
CXCL16-204ENST00000575168 CRACR2BQ8N4Y2 399 aaPredicted RBP14.81□□□□□ -0.04
CXCL16-204ENST00000575168 CSRNP1Q96S65 589 aa14.81□□□□□ -0.04
CXCL16-204ENST00000575168 FAM198AQ9UFP1 575 aa14.81□□□□□ -0.04
CXCL16-204ENST00000575168 PRKAB2O43741 272 aa14.8□□□□□ -0.04
CXCL16-204ENST00000575168 PPP1R12BO60237 982 aaPredicted RBP14.8□□□□□ -0.04
CXCL16-204ENST00000575168 CHGBP05060 677 aa14.8□□□□□ -0.04
CXCL16-204ENST00000575168 PCP11498 1178 aaKnown RBP14.8□□□□□ -0.04
CXCL16-204ENST00000575168 NFIAQ12857 509 aa14.8□□□□□ -0.04
CXCL16-204ENST00000575168 USP48Q86UV5 1035 aa14.8□□□□□ -0.04
CXCL16-204ENST00000575168 RNF41Q9H4P4 317 aaPredicted RBP14.8□□□□□ -0.04
CXCL16-204ENST00000575168 SWAP70Q9UH65 585 aa14.8□□□□□ -0.04
CXCL16-204ENST00000575168 HERC5Q9UII4 1024 aaKnown RBP14.8□□□□□ -0.04
CXCL16-204ENST00000575168 ATRNL1Q5VV63 1379 aa14.8□□□□□ -0.04
CXCL16-204ENST00000575168 BAZ2AQ9UIF9 1905 aaKnown RBP14.8□□□□□ -0.04
CXCL16-204ENST00000575168 USP17L12C9JPN9 530 aa14.79□□□□□ -0.04
CXCL16-204ENST00000575168 USP17L21D6R901 530 aa14.79□□□□□ -0.04
CXCL16-204ENST00000575168 ZNF213O14771 459 aa14.79□□□□□ -0.04
CXCL16-204ENST00000575168 KIF3CO14782 793 aa14.79□□□□□ -0.04
CXCL16-204ENST00000575168 PDE4BQ07343 736 aa14.79□□□□□ -0.04
CXCL16-204ENST00000575168 MAP1SQ66K74 1059 aaPredicted RBP14.79□□□□□ -0.04
CXCL16-204ENST00000575168 MAP4K1Q92918 833 aa14.79□□□□□ -0.04
CXCL16-204ENST00000575168 TMEM39BQ9GZU3 492 aa14.79□□□□□ -0.04
CXCL16-204ENST00000575168 EHD4Q9H223 541 aa14.79□□□□□ -0.04
CXCL16-204ENST00000575168 MKRN1Q9UHC7 482 aaKnown RBP14.79□□□□□ -0.04
CXCL16-204ENST00000575168 SAP30BPQ9UHR5 308 aaKnown RBP14.79□□□□□ -0.04
CXCL16-204ENST00000575168 PALD1Q9ULE6 856 aa14.79□□□□□ -0.04
CXCL16-204ENST00000575168 CNTNAP1P78357 1384 aa14.78□□□□□ -0.04
CXCL16-204ENST00000575168 ASTN2O75129 1339 aaPredicted RBP14.78□□□□□ -0.04
CXCL16-204ENST00000575168 MINDY4BA8MYZ0 360 aa14.78□□□□□ -0.04
CXCL16-204ENST00000575168 FGAP02671 866 aa14.78□□□□□ -0.04
CXCL16-204ENST00000575168 ZKSCAN1P17029 563 aaPredicted RBP14.78□□□□□ -0.04
CXCL16-204ENST00000575168 FKBP1BP68106 108 aa14.78□□□□□ -0.04
CXCL16-204ENST00000575168 ARMC9Q7Z3E5 817 aa14.78□□□□□ -0.04
CXCL16-204ENST00000575168 GLIS2Q9BZE0 524 aaPredicted RBP14.78□□□□□ -0.04
CXCL16-204ENST00000575168 DDX4Q9NQI0 724 aaKnown RBP14.78□□□□□ -0.04
CXCL16-204ENST00000575168 SERPINB13Q9UIV8 391 aa14.78□□□□□ -0.04
CXCL16-204ENST00000575168 UNCXA6NJT0 531 aa14.77□□□□□ -0.05
CXCL16-204ENST00000575168 ADM5C9JUS6 153 aa14.77□□□□□ -0.05
CXCL16-204ENST00000575168 TBC1D12O60347 775 aa14.77□□□□□ -0.05
CXCL16-204ENST00000575168 C12orf60Q5U649 245 aa14.77□□□□□ -0.05
CXCL16-204ENST00000575168 CTR9Q6PD62 1173 aa14.77□□□□□ -0.05
CXCL16-204ENST00000575168 CDCA5Q96FF9 252 aa14.77□□□□□ -0.05
CXCL16-204ENST00000575168 ZNF341Q9BYN7 854 aa14.77□□□□□ -0.05
CXCL16-204ENST00000575168 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.77□□□□□ -0.05
CXCL16-204ENST00000575168 MKNK2Q9HBH9 465 aa14.77□□□□□ -0.05
CXCL16-204ENST00000575168 TRPM7Q96QT4 1865 aa14.76□□□□□ -0.05
CXCL16-204ENST00000575168 LAMB1P07942 1786 aa14.76□□□□□ -0.05
CXCL16-204ENST00000575168 POTEIP0CG38 1075 aa14.76□□□□□ -0.05
CXCL16-204ENST00000575168 POTEJP0CG39 1038 aa14.76□□□□□ -0.05
CXCL16-204ENST00000575168 IREB2P48200 963 aaKnown RBP14.76□□□□□ -0.05
CXCL16-204ENST00000575168 PPARAQ07869 468 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms