RNA–Protein interactions for RNA: ENST00000574218.1

CTNS-208, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 5

Gene CTNS, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-208ENST00000574218 STAP2Q9UGK3 403 aa14.94□□□□□ -0.02
CTNS-208ENST00000574218 DAGLAQ9Y4D2 1042 aa14.94□□□□□ -0.02
CTNS-208ENST00000574218 LRRFIP2Q9Y608 721 aaKnown RBP14.94□□□□□ -0.02
CTNS-208ENST00000574218 ZHX2Q9Y6X8 837 aa14.94□□□□□ -0.02
CTNS-208ENST00000574218 PHIPQ8WWQ0 1821 aa14.94□□□□□ -0.02
CTNS-208ENST00000574218 CUL9Q8IWT3 2517 aa14.93□□□□□ -0.02
CTNS-208ENST00000574218 LDHBP07195 334 aaKnown RBP14.93□□□□□ -0.02
CTNS-208ENST00000574218 IRF5Q13568 498 aa14.93□□□□□ -0.02
CTNS-208ENST00000574218 RABL6Q3YEC7 729 aaPredicted RBP14.93□□□□□ -0.02
CTNS-208ENST00000574218 VGLL2Q8N8G2 317 aa14.93□□□□□ -0.02
CTNS-208ENST00000574218 KAZALD1Q96I82 304 aa14.93□□□□□ -0.02
CTNS-208ENST00000574218 LRCH3Q96II8 777 aa14.93□□□□□ -0.02
CTNS-208ENST00000574218 GNL3LQ9NVN8 582 aaKnown RBP14.93□□□□□ -0.02
CTNS-208ENST00000574218 SLC45A1Q9Y2W3 748 aa14.93□□□□□ -0.02
CTNS-208ENST00000574218 ATAD5Q96QE3 1844 aa14.92□□□□□ -0.02
CTNS-208ENST00000574218 A0A0G2JLL6 359 aaPredicted RBP14.92□□□□□ -0.02
CTNS-208ENST00000574218 MNX1P50219 401 aaPredicted RBP14.92□□□□□ -0.02
CTNS-208ENST00000574218 NFIAQ12857 509 aa14.92□□□□□ -0.02
CTNS-208ENST00000574218 DIXDC1Q155Q3 683 aa14.92□□□□□ -0.02
CTNS-208ENST00000574218 PRRT2Q7Z6L0 340 aaPredicted RBP14.92□□□□□ -0.02
CTNS-208ENST00000574218 LPIN2Q92539 896 aa14.92□□□□□ -0.02
CTNS-208ENST00000574218 PAWRQ96IZ0 340 aaKnown RBP14.92□□□□□ -0.02
CTNS-208ENST00000574218 PNMA3Q9UL41 463 aa14.92□□□□□ -0.02
CTNS-208ENST00000574218 UTYO14607 1347 aa14.92□□□□□ -0.02
CTNS-208ENST00000574218 SOX1O00570 391 aaPredicted RBP14.91□□□□□ -0.02
CTNS-208ENST00000574218 C7orf61Q8IZ16 206 aa14.91□□□□□ -0.02
CTNS-208ENST00000574218 KLHDC4Q8TBB5 520 aa14.91□□□□□ -0.02
CTNS-208ENST00000574218 FAM198AQ9UFP1 575 aa14.91□□□□□ -0.02
CTNS-208ENST00000574218 DDX60LQ5H9U9 1706 aaKnown RBP14.91□□□□□ -0.02
CTNS-208ENST00000574218 PTPRAP18433 802 aa14.9□□□□□ -0.02
CTNS-208ENST00000574218 FGFR2P21802 821 aa14.9□□□□□ -0.02
CTNS-208ENST00000574218 RGS3P49796 1198 aa14.9□□□□□ -0.02
CTNS-208ENST00000574218 CCDC184Q52MB2 194 aa14.9□□□□□ -0.02
CTNS-208ENST00000574218 ANKRD44Q8N8A2 993 aa14.9□□□□□ -0.02
CTNS-208ENST00000574218 ANKLE1Q8NAG6 615 aa14.9□□□□□ -0.02
CTNS-208ENST00000574218 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.9□□□□□ -0.02
CTNS-208ENST00000574218 PAK6Q9NQU5 681 aaPredicted RBP14.9□□□□□ -0.02
CTNS-208ENST00000574218 TRIM75PA6NK02 468 aa14.89□□□□□ -0.03
CTNS-208ENST00000574218 EYA2O00167 538 aa14.89□□□□□ -0.03
CTNS-208ENST00000574218 ENTPD3O75355 529 aa14.89□□□□□ -0.03
CTNS-208ENST00000574218 PRDX5P30044 214 aa14.89□□□□□ -0.03
CTNS-208ENST00000574218 GPR153Q6NV75 609 aa14.89□□□□□ -0.03
CTNS-208ENST00000574218 SLF2Q8IX21 1173 aa14.89□□□□□ -0.03
CTNS-208ENST00000574218 ZGPATQ8N5A5 531 aaKnown RBP14.89□□□□□ -0.03
CTNS-208ENST00000574218 DEFB123Q8N688 67 aa14.89□□□□□ -0.03
CTNS-208ENST00000574218 CRISPLD2Q9H0B8 497 aa14.89□□□□□ -0.03
CTNS-208ENST00000574218 MRS2Q9HD23 443 aa14.89□□□□□ -0.03
CTNS-208ENST00000574218 DENND2AQ9ULE3 1009 aa14.89□□□□□ -0.03
CTNS-208ENST00000574218 ZMYND8Q9ULU4 1186 aaPredicted RBP14.89□□□□□ -0.03
CTNS-208ENST00000574218 AFG3L2Q9Y4W6 797 aa14.89□□□□□ -0.03
CTNS-208ENST00000574218 BMP8BP34820 402 aa14.88□□□□□ -0.03
CTNS-208ENST00000574218 PABPC4Q13310 644 aaKnown RBP eCLIP14.88□□□□□ -0.03
CTNS-208ENST00000574218 DZIP1Q86YF9 867 aaKnown RBP14.88□□□□□ -0.03
CTNS-208ENST00000574218 ANKRD13CQ8N6S4 541 aa14.88□□□□□ -0.03
CTNS-208ENST00000574218 AGTPBP1Q9UPW5 1226 aa14.88□□□□□ -0.03
CTNS-208ENST00000574218 COL6A3P12111 3177 aa14.88□□□□□ -0.03
CTNS-208ENST00000574218 LOC285556D6RIA3 1793 aa14.88□□□□□ -0.03
CTNS-208ENST00000574218 PHF20L1A8MW92 1017 aa14.87□□□□□ -0.03
CTNS-208ENST00000574218 CTNND1O60716 968 aaKnown RBP14.87□□□□□ -0.03
CTNS-208ENST00000574218 HMGCRP04035 888 aa14.87□□□□□ -0.03
CTNS-208ENST00000574218 ATP2B3Q16720 1220 aa14.87□□□□□ -0.03
CTNS-208ENST00000574218 FAM110CQ1W6H9 321 aa14.87□□□□□ -0.03
CTNS-208ENST00000574218 ZFPM1Q8IX07 1006 aa14.87□□□□□ -0.03
CTNS-208ENST00000574218 DIS3LQ8TF46 1054 aaKnown RBP14.87□□□□□ -0.03
CTNS-208ENST00000574218 GDF15Q99988 308 aa14.87□□□□□ -0.03
CTNS-208ENST00000574218 IDI2Q9BXS1 227 aa14.87□□□□□ -0.03
CTNS-208ENST00000574218 NBPF3Q9H094 633 aa14.87□□□□□ -0.03
CTNS-208ENST00000574218 HMX1Q9NP08 348 aaPredicted RBP14.87□□□□□ -0.03
CTNS-208ENST00000574218 SALL1Q9NSC2 1324 aa14.87□□□□□ -0.03
CTNS-208ENST00000574218 SEMA3EO15041 775 aa14.86□□□□□ -0.03
CTNS-208ENST00000574218 GCLCP48506 637 aaPredicted RBP14.86□□□□□ -0.03
CTNS-208ENST00000574218 PICALMQ13492 652 aa14.86□□□□□ -0.03
CTNS-208ENST00000574218 CEP126Q9P2H0 1117 aa14.86□□□□□ -0.03
CTNS-208ENST00000574218 PTPRCP08575 1304 aa14.86□□□□□ -0.03
CTNS-208ENST00000574218 ATRNL1Q5VV63 1379 aa14.85□□□□□ -0.03
CTNS-208ENST00000574218 TDHQ8IZJ6 230 aa14.85□□□□□ -0.03
CTNS-208ENST00000574218 PROCA1Q8NCQ7 364 aaPredicted RBP14.85□□□□□ -0.03
CTNS-208ENST00000574218 C11orf49Q9H6J7 331 aa14.85□□□□□ -0.03
CTNS-208ENST00000574218 STXBP5LQ9Y2K9 1186 aa14.85□□□□□ -0.03
CTNS-208ENST00000574218 RPTORQ8N122 1335 aa14.85□□□□□ -0.03
CTNS-208ENST00000574218 SYN1P17600 705 aa14.84□□□□□ -0.03
CTNS-208ENST00000574218 SPTY2D1Q68D10 685 aaPredicted RBP14.84□□□□□ -0.03
CTNS-208ENST00000574218 TBC1D2Q9BYX2 928 aa14.84□□□□□ -0.03
CTNS-208ENST00000574218 UBE2OQ9C0C9 1292 aaKnown RBP14.84□□□□□ -0.03
CTNS-208ENST00000574218 SIL1Q9H173 461 aa14.84□□□□□ -0.03
CTNS-208ENST00000574218 ABCF2Q9UG63 623 aa14.84□□□□□ -0.03
CTNS-208ENST00000574218 FBXO3Q9UK99 471 aa14.84□□□□□ -0.03
CTNS-208ENST00000574218 LAMA3Q16787 3333 aa14.84□□□□□ -0.03
CTNS-208ENST00000574218 MAGEA10P43363 369 aaPredicted RBP14.83□□□□□ -0.04
CTNS-208ENST00000574218 LRIT3Q3SXY7 679 aa14.83□□□□□ -0.04
CTNS-208ENST00000574218 TREML2Q5T2D2 321 aa14.83□□□□□ -0.04
CTNS-208ENST00000574218 Q7L0L9 218 aa14.83□□□□□ -0.04
CTNS-208ENST00000574218 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.83□□□□□ -0.04
CTNS-208ENST00000574218 GAKO14976 1311 aa14.83□□□□□ -0.04
CTNS-208ENST00000574218 PLXNB2O15031 1838 aa14.82□□□□□ -0.04
CTNS-208ENST00000574218 DDTLA6NHG4 134 aaPredicted RBP14.82□□□□□ -0.04
CTNS-208ENST00000574218 BTDP43251 543 aa14.82□□□□□ -0.04
CTNS-208ENST00000574218 PHKA1P46020 1223 aa14.82□□□□□ -0.04
CTNS-208ENST00000574218 MAP3K10Q02779 954 aa14.82□□□□□ -0.04
CTNS-208ENST00000574218 SH3BP5LQ7L8J4 393 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms