RNA–Protein interactions for RNA: ENST00000573955.1

USP43-204, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 1 (best)

Gene USP43, Length 2,641 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-204ENST00000573955 MYL10Q9BUA6 226 aa18.61■□□□□ 0.57
USP43-204ENST00000573955 COL24A1Q17RW2 1714 aa18.6■□□□□ 0.57
USP43-204ENST00000573955 CPLX1O14810 134 aa18.6■□□□□ 0.57
USP43-204ENST00000573955 RGL2O15211 777 aa18.6■□□□□ 0.57
USP43-204ENST00000573955 MSL1Q68DK7 614 aa18.6■□□□□ 0.57
USP43-204ENST00000573955 FTOQ9C0B1 505 aaKnown RBP eCLIP18.6■□□□□ 0.57
USP43-204ENST00000573955 GJB4Q9NTQ9 266 aa18.6■□□□□ 0.57
USP43-204ENST00000573955 ANGEL1Q9UNK9 670 aaKnown RBP18.6■□□□□ 0.57
USP43-204ENST00000573955 SALL1Q9NSC2 1324 aa18.6■□□□□ 0.57
USP43-204ENST00000573955 CARMIL3Q8ND23 1372 aa18.6■□□□□ 0.57
USP43-204ENST00000573955 TNRC6CQ9HCJ0 1690 aaKnown RBP18.6■□□□□ 0.57
USP43-204ENST00000573955 MAGEB6P1A0A0J9YX57 407 aa18.6■□□□□ 0.57
USP43-204ENST00000573955 NFXL1Q6ZNB6 911 aa18.6■□□□□ 0.57
USP43-204ENST00000573955 MICU3Q86XE3 530 aa18.6■□□□□ 0.57
USP43-204ENST00000573955 GPR101Q96P66 508 aaPredicted RBP18.6■□□□□ 0.57
USP43-204ENST00000573955 TRIM34Q9BYJ4 488 aa18.6■□□□□ 0.57
USP43-204ENST00000573955 NACAP1Q9BZK3 213 aa18.6■□□□□ 0.57
USP43-204ENST00000573955 ANKIB1Q9P2G1 1089 aa18.6■□□□□ 0.57
USP43-204ENST00000573955 CCDC39Q9UFE4 941 aa18.6■□□□□ 0.57
USP43-204ENST00000573955 MINDY4BA8MYZ0 360 aa18.59■□□□□ 0.57
USP43-204ENST00000573955 GYS1P13807 737 aa18.59■□□□□ 0.57
USP43-204ENST00000573955 EVCP57679 992 aa18.59■□□□□ 0.57
USP43-204ENST00000573955 CCDC183Q5T5S1 534 aa18.59■□□□□ 0.57
USP43-204ENST00000573955 FBXL16Q8N461 479 aa18.59■□□□□ 0.57
USP43-204ENST00000573955 SH2B2O14492 632 aaPredicted RBP18.59■□□□□ 0.57
USP43-204ENST00000573955 HIBADHP31937 336 aaKnown RBP18.59■□□□□ 0.57
USP43-204ENST00000573955 ALX1Q15699 326 aa18.59■□□□□ 0.57
USP43-204ENST00000573955 ZSWIM5Q9P217 1185 aa18.59■□□□□ 0.57
USP43-204ENST00000573955 KIF3AQ9Y496 699 aa18.59■□□□□ 0.57
USP43-204ENST00000573955 PSEN1P49768 467 aa18.58■□□□□ 0.57
USP43-204ENST00000573955 GABPB1Q06547 395 aaPredicted RBP18.58■□□□□ 0.57
USP43-204ENST00000573955 ZNF384Q8TF68 577 aa18.58■□□□□ 0.57
USP43-204ENST00000573955 LEO1Q8WVC0 666 aaPredicted RBP18.58■□□□□ 0.57
USP43-204ENST00000573955 TSPY26PQ9H489 355 aa18.58■□□□□ 0.57
USP43-204ENST00000573955 GOLGA6L4A6NEF3 574 aa18.58■□□□□ 0.56
USP43-204ENST00000573955 ADD1P35611 737 aaKnown RBP18.58■□□□□ 0.56
USP43-204ENST00000573955 TMEM67Q5HYA8 995 aa18.58■□□□□ 0.56
USP43-204ENST00000573955 NAA16Q6N069 864 aaPredicted RBP18.58■□□□□ 0.56
USP43-204ENST00000573955 GIMAP6Q6P9H5 292 aa18.58■□□□□ 0.56
USP43-204ENST00000573955 MFSD6Q6ZSS7 791 aa18.58■□□□□ 0.56
USP43-204ENST00000573955 PNPLA7Q6ZV29 1317 aa18.58■□□□□ 0.56
USP43-204ENST00000573955 FBXO33Q7Z6M2 555 aa18.58■□□□□ 0.56
USP43-204ENST00000573955 ANKRD2Q9GZV1 360 aa18.58■□□□□ 0.56
USP43-204ENST00000573955 YY1AP1Q9H869 796 aa18.58■□□□□ 0.56
USP43-204ENST00000573955 ORC3Q9UBD5 711 aaPredicted RBP18.58■□□□□ 0.56
USP43-204ENST00000573955 AKNAD1Q5T1N1 836 aa18.57■□□□□ 0.56
USP43-204ENST00000573955 PRR5LQ6MZQ0 368 aa18.57■□□□□ 0.56
USP43-204ENST00000573955 SCAND2PQ9GZW5 306 aaPredicted RBP18.57■□□□□ 0.56
USP43-204ENST00000573955 TSPYL1Q9H0U9 437 aa18.57■□□□□ 0.56
USP43-204ENST00000573955 CYP2D7A0A087X1C5 515 aa18.57■□□□□ 0.56
USP43-204ENST00000573955 IFIT3O14879 490 aaKnown RBP18.57■□□□□ 0.56
USP43-204ENST00000573955 LIG1P18858 919 aa18.57■□□□□ 0.56
USP43-204ENST00000573955 GNAT2P19087 354 aa18.57■□□□□ 0.56
USP43-204ENST00000573955 PRDX5P30044 214 aa18.57■□□□□ 0.56
USP43-204ENST00000573955 METAP2P50579 478 aaKnown RBP eCLIP18.56■□□□□ 0.56
USP43-204ENST00000573955 KIAA2012Q0VF49 1180 aa18.56■□□□□ 0.56
USP43-204ENST00000573955 CAMK4Q16566 473 aa18.56■□□□□ 0.56
USP43-204ENST00000573955 AXDND1Q5T1B0 1012 aaPredicted RBP18.56■□□□□ 0.56
USP43-204ENST00000573955 APOA5Q6Q788 366 aa18.56■□□□□ 0.56
USP43-204ENST00000573955 IGDCC4Q8TDY8 1250 aa18.56■□□□□ 0.56
USP43-204ENST00000573955 AIFM3Q96NN9 605 aa18.56■□□□□ 0.56
USP43-204ENST00000573955 ZSCAN16Q9H4T2 348 aaPredicted RBP18.56■□□□□ 0.56
USP43-204ENST00000573955 WDR19Q8NEZ3 1342 aa18.56■□□□□ 0.56
USP43-204ENST00000573955 DHX16O60231 1041 aaKnown RBP18.55■□□□□ 0.56
USP43-204ENST00000573955 MYCNP04198 464 aaPredicted RBP18.55■□□□□ 0.56
USP43-204ENST00000573955 PHKBQ93100 1093 aa18.55■□□□□ 0.56
USP43-204ENST00000573955 FEZ1Q99689 392 aa18.55■□□□□ 0.56
USP43-204ENST00000573955 RIOK1Q9BRS2 568 aaKnown RBP18.55■□□□□ 0.56
USP43-204ENST00000573955 LY9Q9HBG7 655 aa18.55■□□□□ 0.56
USP43-204ENST00000573955 GEMIN8Q9NWZ8 242 aaKnown RBP18.55■□□□□ 0.56
USP43-204ENST00000573955 U2AF2P26368 475 aaKnown RBP eCLIP18.55■□□□□ 0.56
USP43-204ENST00000573955 CDC27P30260 824 aa18.55■□□□□ 0.56
USP43-204ENST00000573955 MECOMQ03112 1051 aa18.55■□□□□ 0.56
USP43-204ENST00000573955 PPARAQ07869 468 aa18.55■□□□□ 0.56
USP43-204ENST00000573955 DDR1Q08345 913 aa18.55■□□□□ 0.56
USP43-204ENST00000573955 GRAPQ13588 217 aa18.55■□□□□ 0.56
USP43-204ENST00000573955 GRAPLQ8TC17 118 aaPredicted RBP18.55■□□□□ 0.56
USP43-204ENST00000573955 C8orf76Q96K31 380 aa18.55■□□□□ 0.56
USP43-204ENST00000573955 AATFQ9NY61 560 aaKnown RBP eCLIP18.55■□□□□ 0.56
USP43-204ENST00000573955 UBR3Q6ZT12 1888 aa18.55■□□□□ 0.56
USP43-204ENST00000573955 SERPINB2P05120 415 aa18.54■□□□□ 0.56
USP43-204ENST00000573955 SLC4A8Q2Y0W8 1093 aa18.54■□□□□ 0.56
USP43-204ENST00000573955 BICD2Q8TD16 824 aa18.54■□□□□ 0.56
USP43-204ENST00000573955 RPGRQ92834 1020 aaKnown RBP18.54■□□□□ 0.56
USP43-204ENST00000573955 ZMYM6O95789 1325 aa18.54■□□□□ 0.56
USP43-204ENST00000573955 TULP2O00295 520 aa18.54■□□□□ 0.56
USP43-204ENST00000573955 EN1Q05925 392 aaPredicted RBP18.54■□□□□ 0.56
USP43-204ENST00000573955 COL23A1Q86Y22 540 aaPredicted RBP18.54■□□□□ 0.56
USP43-204ENST00000573955 PGBD1Q96JS3 809 aa18.54■□□□□ 0.56
USP43-204ENST00000573955 ELP1O95163 1332 aa18.54■□□□□ 0.56
USP43-204ENST00000573955 ZBTB43O43298 467 aa18.53■□□□□ 0.56
USP43-204ENST00000573955 POLR3DP05423 398 aaPredicted RBP18.53■□□□□ 0.56
USP43-204ENST00000573955 EVX2Q03828 476 aa18.53■□□□□ 0.56
USP43-204ENST00000573955 ILDR1Q86SU0 546 aaPredicted RBP18.53■□□□□ 0.56
USP43-204ENST00000573955 ZBTB9Q96C00 473 aa18.53■□□□□ 0.56
USP43-204ENST00000573955 NSUN4Q96CB9 384 aaKnown RBP18.53■□□□□ 0.56
USP43-204ENST00000573955 TMEM87BQ96K49 555 aa18.53■□□□□ 0.56
USP43-204ENST00000573955 CACNA1SQ13698 1873 aa18.53■□□□□ 0.56
USP43-204ENST00000573955 GOLGA8AA7E2F4 631 aa18.53■□□□□ 0.56
USP43-204ENST00000573955 UBE2Q2LH0YL09 131 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms