RNA–Protein interactions for RNA: ENST00000572905.1

TOM1L1-215, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 3

Gene TOM1L1, Length 537 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-215ENST00000572905 CPSF6Q16630 551 aaKnown RBP eCLIP8.13□□□□□ -1.11
TOM1L1-215ENST00000572905 MSMPQ1L6U9 139 aa8.13□□□□□ -1.11
TOM1L1-215ENST00000572905 GLIS3Q8NEA6 775 aa8.13□□□□□ -1.11
TOM1L1-215ENST00000572905 LRRC4CQ9HCJ2 640 aa8.13□□□□□ -1.11
TOM1L1-215ENST00000572905 TRAK1Q9UPV9 953 aa8.13□□□□□ -1.11
TOM1L1-215ENST00000572905 DAGLAQ9Y4D2 1042 aa8.13□□□□□ -1.11
TOM1L1-215ENST00000572905 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.12□□□□□ -1.11
TOM1L1-215ENST00000572905 PAX4O43316 350 aa8.12□□□□□ -1.11
TOM1L1-215ENST00000572905 CTSHP09668 335 aa8.12□□□□□ -1.11
TOM1L1-215ENST00000572905 LIG1P18858 919 aa8.12□□□□□ -1.11
TOM1L1-215ENST00000572905 FCGRTP55899 365 aa8.12□□□□□ -1.11
TOM1L1-215ENST00000572905 DTHD1Q6ZMT9 781 aa8.12□□□□□ -1.11
TOM1L1-215ENST00000572905 GATA6Q92908 595 aa8.12□□□□□ -1.11
TOM1L1-215ENST00000572905 OSBPL7Q9BZF2 842 aa8.12□□□□□ -1.11
TOM1L1-215ENST00000572905 ACSS3Q9H6R3 686 aa8.12□□□□□ -1.11
TOM1L1-215ENST00000572905 PPP1R9AQ9ULJ8 1098 aa8.12□□□□□ -1.11
TOM1L1-215ENST00000572905 DYNC1LI2O43237 492 aaPredicted RBP8.11□□□□□ -1.11
TOM1L1-215ENST00000572905 ZNF765Q7L2R6 523 aa8.11□□□□□ -1.11
TOM1L1-215ENST00000572905 METTL16Q86W50 562 aaKnown RBP8.11□□□□□ -1.11
TOM1L1-215ENST00000572905 NT5DC4Q86YG4 428 aa8.11□□□□□ -1.11
TOM1L1-215ENST00000572905 WDR89Q96FK6 387 aaPredicted RBP8.11□□□□□ -1.11
TOM1L1-215ENST00000572905 KRTAP4-12Q9BQ66 201 aa8.11□□□□□ -1.11
TOM1L1-215ENST00000572905 BCO2Q9BYV7 579 aa8.11□□□□□ -1.11
TOM1L1-215ENST00000572905 CCDC86Q9H6F5 360 aaKnown RBP8.11□□□□□ -1.11
TOM1L1-215ENST00000572905 PPP4R2Q9NY27 417 aa8.11□□□□□ -1.11
TOM1L1-215ENST00000572905 CCDC39Q9UFE4 941 aa8.11□□□□□ -1.11
TOM1L1-215ENST00000572905 GPN3Q9UHW5 284 aaPredicted RBP8.11□□□□□ -1.11
TOM1L1-215ENST00000572905 USP17L7P0C7H9 530 aa8.1□□□□□ -1.11
TOM1L1-215ENST00000572905 RPS26P11Q5JNZ5 115 aaPredicted RBP8.1□□□□□ -1.11
TOM1L1-215ENST00000572905 C9orf131Q5VYM1 1079 aa8.1□□□□□ -1.11
TOM1L1-215ENST00000572905 DUSP27Q5VZP5 1158 aa8.1□□□□□ -1.11
TOM1L1-215ENST00000572905 NXPE4Q6UWF7 544 aa8.1□□□□□ -1.11
TOM1L1-215ENST00000572905 ABI1Q8IZP0 508 aa8.1□□□□□ -1.11
TOM1L1-215ENST00000572905 IGSF3O75054 1194 aa8.09□□□□□ -1.11
TOM1L1-215ENST00000572905 GSTT1P30711 240 aa8.09□□□□□ -1.11
TOM1L1-215ENST00000572905 ST13P50502 369 aaKnown RBP8.09□□□□□ -1.11
TOM1L1-215ENST00000572905 TGIF2Q9GZN2 237 aa8.09□□□□□ -1.11
TOM1L1-215ENST00000572905 GSX1Q9H4S2 264 aaPredicted RBP8.09□□□□□ -1.11
TOM1L1-215ENST00000572905 USP35Q9P2H5 1018 aa8.09□□□□□ -1.11
TOM1L1-215ENST00000572905 TMPRSS2O15393 492 aa8.08□□□□□ -1.12
TOM1L1-215ENST00000572905 RAD51AP2Q09MP3 1159 aa8.08□□□□□ -1.12
TOM1L1-215ENST00000572905 TAF1CQ15572 869 aaPredicted RBP8.08□□□□□ -1.12
TOM1L1-215ENST00000572905 HS2ST1Q7LGA3 356 aa8.08□□□□□ -1.12
TOM1L1-215ENST00000572905 CCSER2Q9H7U1 834 aa8.08□□□□□ -1.12
TOM1L1-215ENST00000572905 C1GALT1Q9NS00 363 aa8.08□□□□□ -1.12
TOM1L1-215ENST00000572905 USP31Q70CQ4 1352 aa8.08□□□□□ -1.12
TOM1L1-215ENST00000572905 GSTP1P09211 210 aaKnown RBP8.07□□□□□ -1.12
TOM1L1-215ENST00000572905 CYP27A1Q02318 531 aa8.07□□□□□ -1.12
TOM1L1-215ENST00000572905 NAALADL2Q58DX5 795 aa8.07□□□□□ -1.12
TOM1L1-215ENST00000572905 VSIG10LQ86VR7 867 aa8.07□□□□□ -1.12
TOM1L1-215ENST00000572905 TP53INP2Q8IXH6 220 aa8.07□□□□□ -1.12
TOM1L1-215ENST00000572905 SREK1Q8WXA9 508 aaKnown RBP8.07□□□□□ -1.12
TOM1L1-215ENST00000572905 PIDD1Q9HB75 910 aa8.07□□□□□ -1.12
TOM1L1-215ENST00000572905 ZC3H7BQ9UGR2 993 aaKnown RBP8.07□□□□□ -1.12
TOM1L1-215ENST00000572905 ADGRE2Q9UHX3 823 aa8.07□□□□□ -1.12
TOM1L1-215ENST00000572905 ZNF862O60290 1169 aa8.06□□□□□ -1.12
TOM1L1-215ENST00000572905 PRNPP04156 253 aa8.06□□□□□ -1.12
TOM1L1-215ENST00000572905 XRCC5P13010 732 aaKnown RBP8.06□□□□□ -1.12
TOM1L1-215ENST00000572905 ID3Q02535 119 aa8.06□□□□□ -1.12
TOM1L1-215ENST00000572905 MEI1Q5TIA1 1274 aa8.06□□□□□ -1.12
TOM1L1-215ENST00000572905 SEZ6L2Q6UXD5 910 aa8.06□□□□□ -1.12
TOM1L1-215ENST00000572905 KRTAP1-3Q8IUG1 177 aa8.06□□□□□ -1.12
TOM1L1-215ENST00000572905 KCNB2Q92953 911 aa8.06□□□□□ -1.12
TOM1L1-215ENST00000572905 BSDC1Q9NW68 430 aaPredicted RBP8.06□□□□□ -1.12
TOM1L1-215ENST00000572905 CRIM1Q9NZV1 1036 aa8.06□□□□□ -1.12
TOM1L1-215ENST00000572905 AKAP2Q9Y2D5 859 aa8.06□□□□□ -1.12
TOM1L1-215ENST00000572905 SLFN14P0C7P3 912 aa8.05□□□□□ -1.12
TOM1L1-215ENST00000572905 PPP2R3AQ06190 1150 aa8.05□□□□□ -1.12
TOM1L1-215ENST00000572905 CDK5R2Q13319 367 aa8.05□□□□□ -1.12
TOM1L1-215ENST00000572905 SF3A1Q15459 793 aaKnown RBP8.05□□□□□ -1.12
TOM1L1-215ENST00000572905 NFXL1Q6ZNB6 911 aa8.05□□□□□ -1.12
TOM1L1-215ENST00000572905 FLCNQ8NFG4 579 aa8.05□□□□□ -1.12
TOM1L1-215ENST00000572905 FANCD2OSQ96PS1 177 aa8.05□□□□□ -1.12
TOM1L1-215ENST00000572905 TMEM39AQ9NV64 488 aa8.05□□□□□ -1.12
TOM1L1-215ENST00000572905 PPM1HQ9ULR3 514 aa8.05□□□□□ -1.12
TOM1L1-215ENST00000572905 SYNGAP1Q96PV0 1343 aa8.04□□□□□ -1.12
TOM1L1-215ENST00000572905 RNGTTO60942 597 aaKnown RBP8.04□□□□□ -1.12
TOM1L1-215ENST00000572905 LCE3BQ5TA77 95 aa8.04□□□□□ -1.12
TOM1L1-215ENST00000572905 STK35Q8TDR2 534 aa8.04□□□□□ -1.12
TOM1L1-215ENST00000572905 FBXL18Q96ME1 805 aa8.04□□□□□ -1.12
TOM1L1-215ENST00000572905 ATXN3LQ9H3M9 355 aa8.04□□□□□ -1.12
TOM1L1-215ENST00000572905 GGT7Q9UJ14 662 aa8.04□□□□□ -1.12
TOM1L1-215ENST00000572905 TTF2Q9UNY4 1162 aaKnown RBP8.04□□□□□ -1.12
TOM1L1-215ENST00000572905 RNF114Q9Y508 228 aa8.04□□□□□ -1.12
TOM1L1-215ENST00000572905 HCLS1P14317 486 aaPredicted RBP8.03□□□□□ -1.12
TOM1L1-215ENST00000572905 GNL2Q13823 731 aaKnown RBP8.03□□□□□ -1.12
TOM1L1-215ENST00000572905 TTLL4Q14679 1199 aa8.03□□□□□ -1.12
TOM1L1-215ENST00000572905 KIF4BQ2VIQ3 1234 aa8.03□□□□□ -1.12
TOM1L1-215ENST00000572905 OGFOD3Q6PK18 319 aa8.03□□□□□ -1.12
TOM1L1-215ENST00000572905 USP48Q86UV5 1035 aa8.03□□□□□ -1.12
TOM1L1-215ENST00000572905 SULF2Q8IWU5 870 aa8.03□□□□□ -1.12
TOM1L1-215ENST00000572905 ZNF654Q8IZM8 581 aa8.03□□□□□ -1.12
TOM1L1-215ENST00000572905 DRC1Q96MC2 740 aa8.03□□□□□ -1.12
TOM1L1-215ENST00000572905 GOLGA2P5Q9HBQ8 144 aa8.03□□□□□ -1.12
TOM1L1-215ENST00000572905 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.03□□□□□ -1.12
TOM1L1-215ENST00000572905 PCDHGC5Q9Y5F6 944 aa8.03□□□□□ -1.12
TOM1L1-215ENST00000572905 FAM87AP0C7U9 286 aa8.02□□□□□ -1.13
TOM1L1-215ENST00000572905 HNRNPUQ00839 825 aaKnown RBP eCLIP8.02□□□□□ -1.13
TOM1L1-215ENST00000572905 MAP1SQ66K74 1059 aaPredicted RBP8.02□□□□□ -1.13
TOM1L1-215ENST00000572905 PDZD3Q86UT5 571 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms