RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 A0A1W2PRQ8 180 aa4.2□□□□□ -1.74
SMG6-208ENST00000570874 PRAMEF22A3QJZ6 481 aa4.2□□□□□ -1.74
SMG6-208ENST00000570874 F6X3S4 739 aa4.2□□□□□ -1.74
SMG6-208ENST00000570874 ATP9BO43861 1147 aa4.2□□□□□ -1.74
SMG6-208ENST00000570874 ANXA1P04083 346 aa4.2□□□□□ -1.74
SMG6-208ENST00000570874 KCNA2P16389 499 aa4.2□□□□□ -1.74
SMG6-208ENST00000570874 ZNF76P36508 570 aa4.2□□□□□ -1.74
SMG6-208ENST00000570874 EXOSC10Q01780 885 aaKnown RBP4.2□□□□□ -1.74
SMG6-208ENST00000570874 WASHC5Q12768 1159 aa4.2□□□□□ -1.74
SMG6-208ENST00000570874 ALFQ53S48 1182 aa4.2□□□□□ -1.74
SMG6-208ENST00000570874 FAM133BQ5BKY9 247 aaKnown RBP4.2□□□□□ -1.74
SMG6-208ENST00000570874 ACBD5Q5T8D3 534 aaPredicted RBP4.2□□□□□ -1.74
SMG6-208ENST00000570874 TREML4Q6UXN2 200 aa4.2□□□□□ -1.74
SMG6-208ENST00000570874 ITPRIPQ8IWB1 547 aa4.2□□□□□ -1.74
SMG6-208ENST00000570874 CKAP2LQ8IYA6 745 aa4.2□□□□□ -1.74
SMG6-208ENST00000570874 KIAA1958Q8N8K9 716 aa4.2□□□□□ -1.74
SMG6-208ENST00000570874 FBXO22Q8NEZ5 403 aa4.2□□□□□ -1.74
SMG6-208ENST00000570874 RTF1Q92541 710 aaKnown RBP4.2□□□□□ -1.74
SMG6-208ENST00000570874 CLP1Q92989 425 aaKnown RBP4.2□□□□□ -1.74
SMG6-208ENST00000570874 CDHR1Q96JP9 859 aa4.2□□□□□ -1.74
SMG6-208ENST00000570874 RANBP17Q9H2T7 1088 aaKnown RBP4.2□□□□□ -1.74
SMG6-208ENST00000570874 PRDM11Q9NQV5 511 aa4.2□□□□□ -1.74
SMG6-208ENST00000570874 STRN4Q9NRL3 753 aa4.2□□□□□ -1.74
SMG6-208ENST00000570874 FAM13BQ9NYF5 915 aa4.2□□□□□ -1.74
SMG6-208ENST00000570874 CLIC5Q9NZA1 410 aa4.2□□□□□ -1.74
SMG6-208ENST00000570874 EVLQ9UI08 416 aaPredicted RBP4.2□□□□□ -1.74
SMG6-208ENST00000570874 HDAC9Q9UKV0 1011 aa4.2□□□□□ -1.74
SMG6-208ENST00000570874 MRPS23Q9Y3D9 190 aaKnown RBP4.2□□□□□ -1.74
SMG6-208ENST00000570874 PCDHGA4Q9Y5G9 962 aa4.2□□□□□ -1.74
SMG6-208ENST00000570874 OVOS2A0A0G2JMS6 1433 aa4.2□□□□□ -1.74
SMG6-208ENST00000570874 ABCC4O15439 1325 aa4.2□□□□□ -1.74
SMG6-208ENST00000570874 KIF16BQ96L93 1317 aa4.2□□□□□ -1.74
SMG6-208ENST00000570874 GOLGA6L22H0YM25 854 aa4.19□□□□□ -1.74
SMG6-208ENST00000570874 H3BRB1 525 aa4.19□□□□□ -1.74
SMG6-208ENST00000570874 SLC26A4O43511 780 aa4.19□□□□□ -1.74
SMG6-208ENST00000570874 TSPAN6O43657 245 aa4.19□□□□□ -1.74
SMG6-208ENST00000570874 PPFIA3O75145 1194 aa4.19□□□□□ -1.74
SMG6-208ENST00000570874 CDC45O75419 566 aa4.19□□□□□ -1.74
SMG6-208ENST00000570874 TPM2P07951 284 aa4.19□□□□□ -1.74
SMG6-208ENST00000570874 ATP2B4P23634 1241 aa4.19□□□□□ -1.74
SMG6-208ENST00000570874 RGS3P49796 1198 aa4.19□□□□□ -1.74
SMG6-208ENST00000570874 HMGN5P82970 282 aaKnown RBP4.19□□□□□ -1.74
SMG6-208ENST00000570874 SLC39A6Q13433 755 aa4.19□□□□□ -1.74
SMG6-208ENST00000570874 SEPT2Q15019 361 aa4.19□□□□□ -1.74
SMG6-208ENST00000570874 TAF11Q15544 211 aa4.19□□□□□ -1.74
SMG6-208ENST00000570874 TAF7Q15545 349 aaPredicted RBP4.19□□□□□ -1.74
SMG6-208ENST00000570874 PLEKHO1Q53GL0 409 aaPredicted RBP4.19□□□□□ -1.74
SMG6-208ENST00000570874 ARSHQ5FYA8 562 aa4.19□□□□□ -1.74
SMG6-208ENST00000570874 AKAP4Q5JQC9 854 aa4.19□□□□□ -1.74
SMG6-208ENST00000570874 IQCEQ6IPM2 695 aa4.19□□□□□ -1.74
SMG6-208ENST00000570874 KANK3Q6NY19 840 aa4.19□□□□□ -1.74
SMG6-208ENST00000570874 PDXDC1Q6P996 788 aa4.19□□□□□ -1.74
SMG6-208ENST00000570874 LARP1Q6PKG0 1096 aaKnown RBP4.19□□□□□ -1.74
SMG6-208ENST00000570874 TAS1R3Q7RTX0 852 aa4.19□□□□□ -1.74
SMG6-208ENST00000570874 MCF2L2Q86YR7 1114 aa4.19□□□□□ -1.74
SMG6-208ENST00000570874 SLF2Q8IX21 1173 aa4.19□□□□□ -1.74
SMG6-208ENST00000570874 SMAP1Q8IYB5 467 aaPredicted RBP4.19□□□□□ -1.74
SMG6-208ENST00000570874 RGL4Q8IZJ4 473 aa4.19□□□□□ -1.74
SMG6-208ENST00000570874 ATRIPQ8WXE1 791 aa4.19□□□□□ -1.74
SMG6-208ENST00000570874 E2F7Q96AV8 911 aa4.19□□□□□ -1.74
SMG6-208ENST00000570874 ZNF594Q96JF6 807 aaPredicted RBP4.19□□□□□ -1.74
SMG6-208ENST00000570874 RNPC3Q96LT9 517 aaKnown RBP4.19□□□□□ -1.74
SMG6-208ENST00000570874 FAM210AQ96ND0 272 aa4.19□□□□□ -1.74
SMG6-208ENST00000570874 TUT1Q9H6E5 874 aaKnown RBP4.19□□□□□ -1.74
SMG6-208ENST00000570874 PPCSQ9HAB8 311 aa4.19□□□□□ -1.74
SMG6-208ENST00000570874 CHST12Q9NRB3 414 aa4.19□□□□□ -1.74
SMG6-208ENST00000570874 FAM217BQ9NTX9 383 aaPredicted RBP4.19□□□□□ -1.74
SMG6-208ENST00000570874 DDX41Q9UJV9 622 aaKnown RBP4.19□□□□□ -1.74
SMG6-208ENST00000570874 TMCC3Q9ULS5 477 aa4.19□□□□□ -1.74
SMG6-208ENST00000570874 ZNF652Q9Y2D9 606 aa4.19□□□□□ -1.74
SMG6-208ENST00000570874 SLC45A1Q9Y2W3 748 aa4.19□□□□□ -1.74
SMG6-208ENST00000570874 PPP2R3BQ9Y5P8 575 aa4.19□□□□□ -1.74
SMG6-208ENST00000570874 KCPQ6ZWJ8 1503 aa4.19□□□□□ -1.74
SMG6-208ENST00000570874 BCORQ6W2J9 1755 aa4.19□□□□□ -1.74
SMG6-208ENST00000570874 MYH13Q9UKX3 1938 aa4.19□□□□□ -1.74
SMG6-208ENST00000570874 WDR17Q8IZU2 1322 aa4.19□□□□□ -1.74
SMG6-208ENST00000570874 LAMA4Q16363 1823 aa4.18□□□□□ -1.74
SMG6-208ENST00000570874 CACNA1SQ13698 1873 aa4.18□□□□□ -1.74
SMG6-208ENST00000570874 GRXCR2A6NFK2 248 aa4.18□□□□□ -1.74
SMG6-208ENST00000570874 TRIM64CA6NLI5 447 aa4.18□□□□□ -1.74
SMG6-208ENST00000570874 TRIM6-TRIM34B2RNG4 842 aa4.18□□□□□ -1.74
SMG6-208ENST00000570874 PES1O00541 588 aaKnown RBP4.18□□□□□ -1.74
SMG6-208ENST00000570874 CYP27B1O15528 508 aa4.18□□□□□ -1.74
SMG6-208ENST00000570874 FIBPO43427 364 aa4.18□□□□□ -1.74
SMG6-208ENST00000570874 HTATSF1O43719 755 aaKnown RBP4.18□□□□□ -1.74
SMG6-208ENST00000570874 AP1G2O75843 785 aa4.18□□□□□ -1.74
SMG6-208ENST00000570874 USP17L8P0C7I0 530 aa4.18□□□□□ -1.74
SMG6-208ENST00000570874 PHKG2P15735 406 aa4.18□□□□□ -1.74
SMG6-208ENST00000570874 TATP17735 454 aaPredicted RBP4.18□□□□□ -1.74
SMG6-208ENST00000570874 EIF2S2P20042 333 aaKnown RBP4.18□□□□□ -1.74
SMG6-208ENST00000570874 PIK3CAP42336 1068 aa4.18□□□□□ -1.74
SMG6-208ENST00000570874 CD151P48509 253 aa4.18□□□□□ -1.74
SMG6-208ENST00000570874 ZNF131P52739 623 aa4.18□□□□□ -1.74
SMG6-208ENST00000570874 EPHB1P54762 984 aa4.18□□□□□ -1.74
SMG6-208ENST00000570874 EIF5P55010 431 aaKnown RBP4.18□□□□□ -1.74
SMG6-208ENST00000570874 GEMIN4P57678 1058 aaKnown RBP4.18□□□□□ -1.74
SMG6-208ENST00000570874 EIF4A1P60842 406 aaKnown RBP4.18□□□□□ -1.74
SMG6-208ENST00000570874 PIP4K2BP78356 416 aa4.18□□□□□ -1.74
SMG6-208ENST00000570874 SATB1Q01826 763 aa4.18□□□□□ -1.74
SMG6-208ENST00000570874 SUZ12Q15022 739 aaKnown RBP4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms