RNA–Protein interactions for RNA: ENST00000569603.1

LINC00556-201, long intergenic non-protein coding RNA 556, humanhuman

BASIC

Gene LINC00556, Length 412 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00556-201ENST00000569603 LTBP3Q9NS15 1303 aa8.13□□□□□ -1.11
LINC00556-201ENST00000569603 BTBD11A6QL63 1104 aa8.13□□□□□ -1.11
LINC00556-201ENST00000569603 C2CD2LO14523 706 aa8.13□□□□□ -1.11
LINC00556-201ENST00000569603 LMNB1P20700 586 aa8.13□□□□□ -1.11
LINC00556-201ENST00000569603 XP32Q5T750 250 aa8.13□□□□□ -1.11
LINC00556-201ENST00000569603 MCM10Q7L590 875 aa8.13□□□□□ -1.11
LINC00556-201ENST00000569603 C2CD5Q86YS7 1000 aa8.13□□□□□ -1.11
LINC00556-201ENST00000569603 PHTF2Q8N3S3 785 aa8.13□□□□□ -1.11
LINC00556-201ENST00000569603 GALNT6Q8NCL4 622 aa8.13□□□□□ -1.11
LINC00556-201ENST00000569603 PHF24Q9UPV7 400 aa8.13□□□□□ -1.11
LINC00556-201ENST00000569603 NUP98P52948 1817 aa8.13□□□□□ -1.11
LINC00556-201ENST00000569603 KRBA1A5PL33 1030 aa8.12□□□□□ -1.11
LINC00556-201ENST00000569603 SNRPA1P09661 255 aaKnown RBP8.12□□□□□ -1.11
LINC00556-201ENST00000569603 U2AF1L5P0DN76 240 aaPredicted RBP8.12□□□□□ -1.11
LINC00556-201ENST00000569603 SRGNP10124 158 aa8.12□□□□□ -1.11
LINC00556-201ENST00000569603 COL8A1P27658 744 aa8.12□□□□□ -1.11
LINC00556-201ENST00000569603 U2AF1Q01081 240 aaKnown RBP eCLIP8.12□□□□□ -1.11
LINC00556-201ENST00000569603 FSTL1Q12841 308 aa8.12□□□□□ -1.11
LINC00556-201ENST00000569603 IRF5Q13568 498 aa8.12□□□□□ -1.11
LINC00556-201ENST00000569603 DCTN1Q14203 1278 aa8.12□□□□□ -1.11
LINC00556-201ENST00000569603 CLEC4GQ6UXB4 293 aa8.12□□□□□ -1.11
LINC00556-201ENST00000569603 ABHD17AQ96GS6 310 aa8.12□□□□□ -1.11
LINC00556-201ENST00000569603 CFAP53Q96M91 514 aa8.12□□□□□ -1.11
LINC00556-201ENST00000569603 DOLKQ9UPQ8 538 aa8.12□□□□□ -1.11
LINC00556-201ENST00000569603 MTMR7Q9Y216 660 aa8.12□□□□□ -1.11
LINC00556-201ENST00000569603 KDM2BQ8NHM5 1336 aa8.11□□□□□ -1.11
LINC00556-201ENST00000569603 GLTPD2A6NH11 291 aa8.11□□□□□ -1.11
LINC00556-201ENST00000569603 H0YIN7 160 aa8.11□□□□□ -1.11
LINC00556-201ENST00000569603 APBB1O00213 710 aa8.11□□□□□ -1.11
LINC00556-201ENST00000569603 HOXB4P17483 251 aaPredicted RBP8.11□□□□□ -1.11
LINC00556-201ENST00000569603 PIP4K2AP48426 406 aaPredicted RBP8.11□□□□□ -1.11
LINC00556-201ENST00000569603 LBRQ14739 615 aaKnown RBP8.11□□□□□ -1.11
LINC00556-201ENST00000569603 BICDL1Q6ZP65 573 aa8.11□□□□□ -1.11
LINC00556-201ENST00000569603 LRP10Q7Z4F1 713 aa8.11□□□□□ -1.11
LINC00556-201ENST00000569603 JMYQ8N9B5 988 aa8.11□□□□□ -1.11
LINC00556-201ENST00000569603 RHBDD1Q8TEB9 315 aa8.11□□□□□ -1.11
LINC00556-201ENST00000569603 EDARADDQ8WWZ3 215 aa8.11□□□□□ -1.11
LINC00556-201ENST00000569603 RRAGCQ9HB90 399 aa8.11□□□□□ -1.11
LINC00556-201ENST00000569603 NDFIP2Q9NV92 336 aa8.11□□□□□ -1.11
LINC00556-201ENST00000569603 ATXN7L1Q9ULK2 861 aaPredicted RBP8.11□□□□□ -1.11
LINC00556-201ENST00000569603 PDE6BP35913 854 aa8.1□□□□□ -1.11
LINC00556-201ENST00000569603 CNGB1Q14028 1251 aaPredicted RBP8.1□□□□□ -1.11
LINC00556-201ENST00000569603 TLR1Q15399 786 aa8.1□□□□□ -1.11
LINC00556-201ENST00000569603 STYK1Q6J9G0 422 aa8.1□□□□□ -1.11
LINC00556-201ENST00000569603 PGBD3Q8N328 593 aa8.1□□□□□ -1.11
LINC00556-201ENST00000569603 CNBD1Q8NA66 436 aa8.1□□□□□ -1.11
LINC00556-201ENST00000569603 SETDB2Q96T68 719 aa8.1□□□□□ -1.11
LINC00556-201ENST00000569603 GDF2Q9UK05 429 aaPredicted RBP8.1□□□□□ -1.11
LINC00556-201ENST00000569603 MKL2Q9ULH7 1088 aa8.1□□□□□ -1.11
LINC00556-201ENST00000569603 NUDCQ9Y266 331 aa8.1□□□□□ -1.11
LINC00556-201ENST00000569603 RIC1Q4ADV7 1423 aa8.1□□□□□ -1.11
LINC00556-201ENST00000569603 ADAMTSL1Q8N6G6 1762 aa8.1□□□□□ -1.11
LINC00556-201ENST00000569603 COL4A5P29400 1685 aa8.09□□□□□ -1.11
LINC00556-201ENST00000569603 C21orf2O43822 256 aa8.09□□□□□ -1.11
LINC00556-201ENST00000569603 BNIP3LO60238 219 aa8.09□□□□□ -1.11
LINC00556-201ENST00000569603 BMP4P12644 408 aa8.09□□□□□ -1.11
LINC00556-201ENST00000569603 FGFR3P22607 806 aa8.09□□□□□ -1.11
LINC00556-201ENST00000569603 GTF2E1P29083 439 aaPredicted RBP8.09□□□□□ -1.11
LINC00556-201ENST00000569603 PLA2G4AP47712 749 aa8.09□□□□□ -1.11
LINC00556-201ENST00000569603 HTRA3P83110 453 aa8.09□□□□□ -1.11
LINC00556-201ENST00000569603 CTBSQ01459 385 aa8.09□□□□□ -1.11
LINC00556-201ENST00000569603 TAF7Q15545 349 aaPredicted RBP8.09□□□□□ -1.11
LINC00556-201ENST00000569603 HLFQ16534 295 aa8.09□□□□□ -1.11
LINC00556-201ENST00000569603 CRY2Q49AN0 593 aa8.09□□□□□ -1.11
LINC00556-201ENST00000569603 OXLD1Q5BKU9 147 aa8.09□□□□□ -1.11
LINC00556-201ENST00000569603 EFHC2Q5JST6 749 aa8.09□□□□□ -1.11
LINC00556-201ENST00000569603 PRPF40BQ6NWY9 871 aaKnown RBP8.09□□□□□ -1.11
LINC00556-201ENST00000569603 TICAM2Q86XR7 235 aa8.09□□□□□ -1.11
LINC00556-201ENST00000569603 CRISPLD1Q9H336 500 aa8.09□□□□□ -1.11
LINC00556-201ENST00000569603 DNAAF2Q9NVR5 837 aaKnown RBP8.09□□□□□ -1.11
LINC00556-201ENST00000569603 MIS18AQ9NYP9 233 aa8.09□□□□□ -1.11
LINC00556-201ENST00000569603 ABCC12Q96J65 1359 aa8.09□□□□□ -1.12
LINC00556-201ENST00000569603 SCN4AP35499 1836 aa8.08□□□□□ -1.12
LINC00556-201ENST00000569603 VEGFAP15692 232 aaPredicted RBP8.08□□□□□ -1.12
LINC00556-201ENST00000569603 ATP4AP20648 1035 aa8.08□□□□□ -1.12
LINC00556-201ENST00000569603 SCNN1DP51172 638 aa8.08□□□□□ -1.12
LINC00556-201ENST00000569603 EIF4A1P60842 406 aaKnown RBP8.08□□□□□ -1.12
LINC00556-201ENST00000569603 FGD1P98174 961 aa8.08□□□□□ -1.12
LINC00556-201ENST00000569603 SLCO4C1Q6ZQN7 724 aa8.08□□□□□ -1.12
LINC00556-201ENST00000569603 RNF135Q8IUD6 432 aa8.08□□□□□ -1.12
LINC00556-201ENST00000569603 GOLGA6L1Q8N7Z2 621 aa8.08□□□□□ -1.12
LINC00556-201ENST00000569603 MASTLQ96GX5 879 aa8.08□□□□□ -1.12
LINC00556-201ENST00000569603 SUV39H2Q9H5I1 410 aa8.08□□□□□ -1.12
LINC00556-201ENST00000569603 GGA1Q9UJY5 639 aa8.08□□□□□ -1.12
LINC00556-201ENST00000569603 IBTKQ9P2D0 1353 aaPredicted RBP8.08□□□□□ -1.12
LINC00556-201ENST00000569603 ERVV-1B6SEH8 477 aa8.07□□□□□ -1.12
LINC00556-201ENST00000569603 USP4Q13107 963 aa8.07□□□□□ -1.12
LINC00556-201ENST00000569603 NFE2L2Q16236 605 aa8.07□□□□□ -1.12
LINC00556-201ENST00000569603 SLFNL1Q499Z3 407 aa8.07□□□□□ -1.12
LINC00556-201ENST00000569603 TMCO4Q5TGY1 634 aa8.07□□□□□ -1.12
LINC00556-201ENST00000569603 SMC1BQ8NDV3 1235 aa8.07□□□□□ -1.12
LINC00556-201ENST00000569603 RTF1Q92541 710 aaKnown RBP8.07□□□□□ -1.12
LINC00556-201ENST00000569603 ZNF622Q969S3 477 aaKnown RBP eCLIP8.07□□□□□ -1.12
LINC00556-201ENST00000569603 THUMPD2Q9BTF0 503 aaKnown RBP8.07□□□□□ -1.12
LINC00556-201ENST00000569603 TAOK3Q9H2K8 898 aa8.07□□□□□ -1.12
LINC00556-201ENST00000569603 HCN2Q9UL51 889 aa8.07□□□□□ -1.12
LINC00556-201ENST00000569603 UBN2Q6ZU65 1347 aa8.06□□□□□ -1.12
LINC00556-201ENST00000569603 CLSTN1O94985 981 aa8.06□□□□□ -1.12
LINC00556-201ENST00000569603 NPR1P16066 1061 aa8.06□□□□□ -1.12
LINC00556-201ENST00000569603 ST5P78524 1137 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 538.3 ms