RNA–Protein interactions for RNA: ENST00000569225.5

CHD9-219, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 1,862 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-219ENST00000569225 CASC1Q6TDU7 716 aa10.94□□□□□ -0.66
CHD9-219ENST00000569225 MAPKAPK5Q8IW41 473 aa10.94□□□□□ -0.66
CHD9-219ENST00000569225 AMOTL1Q8IY63 956 aa10.94□□□□□ -0.66
CHD9-219ENST00000569225 RUFY2Q8WXA3 655 aa10.94□□□□□ -0.66
CHD9-219ENST00000569225 STRBPQ96SI9 672 aaKnown RBP10.94□□□□□ -0.66
CHD9-219ENST00000569225 NACAP1Q9BZK3 213 aa10.94□□□□□ -0.66
CHD9-219ENST00000569225 OSBPL5Q9H0X9 879 aaPredicted RBP10.94□□□□□ -0.66
CHD9-219ENST00000569225 ATP8A2Q9NTI2 1148 aa10.94□□□□□ -0.66
CHD9-219ENST00000569225 SLC4A4Q9Y6R1 1079 aa10.94□□□□□ -0.66
CHD9-219ENST00000569225 FLT1P17948 1338 aa10.94□□□□□ -0.66
CHD9-219ENST00000569225 M0R2C6 588 aa10.93□□□□□ -0.66
CHD9-219ENST00000569225 PPP1R12BO60237 982 aaPredicted RBP10.93□□□□□ -0.66
CHD9-219ENST00000569225 DCAF15Q66K64 600 aa10.93□□□□□ -0.66
CHD9-219ENST00000569225 C2orf69Q8N8R5 385 aa10.93□□□□□ -0.66
CHD9-219ENST00000569225 TEPSINQ96N21 525 aa10.93□□□□□ -0.66
CHD9-219ENST00000569225 CSRNP1Q96S65 589 aa10.93□□□□□ -0.66
CHD9-219ENST00000569225 DDX4Q9NQI0 724 aaKnown RBP10.93□□□□□ -0.66
CHD9-219ENST00000569225 COL2A1P02458 1487 aaPredicted RBP10.93□□□□□ -0.66
CHD9-219ENST00000569225 TMEM88BA6NKF7 163 aa10.93□□□□□ -0.66
CHD9-219ENST00000569225 HLA-DOAP06340 250 aa10.93□□□□□ -0.66
CHD9-219ENST00000569225 APLP1P51693 650 aa10.93□□□□□ -0.66
CHD9-219ENST00000569225 TTLL12Q14166 644 aaPredicted RBP10.93□□□□□ -0.66
CHD9-219ENST00000569225 NBPF12Q5TAG4 269 aaPredicted RBP10.93□□□□□ -0.66
CHD9-219ENST00000569225 PRAMEF18Q5VWM3 479 aa10.93□□□□□ -0.66
CHD9-219ENST00000569225 GIMAP6Q6P9H5 292 aa10.93□□□□□ -0.66
CHD9-219ENST00000569225 CWC27Q6UX04 472 aaKnown RBP10.93□□□□□ -0.66
CHD9-219ENST00000569225 FAM227BQ96M60 508 aa10.93□□□□□ -0.66
CHD9-219ENST00000569225 ATRNL1Q5VV63 1379 aa10.93□□□□□ -0.66
CHD9-219ENST00000569225 MYH2Q9UKX2 1941 aa10.93□□□□□ -0.66
CHD9-219ENST00000569225 RAD50Q92878 1312 aa10.92□□□□□ -0.66
CHD9-219ENST00000569225 A0A0D9SFI3 127 aa10.92□□□□□ -0.66
CHD9-219ENST00000569225 APPP05067 770 aa10.92□□□□□ -0.66
CHD9-219ENST00000569225 DLK2Q6UY11 383 aa10.92□□□□□ -0.66
CHD9-219ENST00000569225 ARMC9Q7Z3E5 817 aa10.92□□□□□ -0.66
CHD9-219ENST00000569225 TTC6Q86TZ1 520 aa10.92□□□□□ -0.66
CHD9-219ENST00000569225 ZFPM1Q8IX07 1006 aa10.92□□□□□ -0.66
CHD9-219ENST00000569225 SEC62Q99442 399 aaKnown RBP10.92□□□□□ -0.66
CHD9-219ENST00000569225 TRIM34Q9BYJ4 488 aa10.92□□□□□ -0.66
CHD9-219ENST00000569225 GBA2Q9HCG7 927 aaPredicted RBP10.92□□□□□ -0.66
CHD9-219ENST00000569225 MCM9Q9NXL9 1143 aa10.92□□□□□ -0.66
CHD9-219ENST00000569225 PI4KBQ9UBF8 816 aa10.92□□□□□ -0.66
CHD9-219ENST00000569225 CCDC171Q6TFL3 1326 aa10.91□□□□□ -0.66
CHD9-219ENST00000569225 PRKAB2O43741 272 aa10.91□□□□□ -0.66
CHD9-219ENST00000569225 POLR3DP05423 398 aaPredicted RBP10.91□□□□□ -0.66
CHD9-219ENST00000569225 CHMLP26374 656 aa10.91□□□□□ -0.66
CHD9-219ENST00000569225 IREB2P48200 963 aaKnown RBP10.91□□□□□ -0.66
CHD9-219ENST00000569225 SDR42E1Q8WUS8 393 aa10.91□□□□□ -0.66
CHD9-219ENST00000569225 DCP1AQ9NPI6 582 aaPredicted RBP10.91□□□□□ -0.66
CHD9-219ENST00000569225 SAP30BPQ9UHR5 308 aaKnown RBP10.91□□□□□ -0.66
CHD9-219ENST00000569225 TAOK2Q9UL54 1235 aa10.91□□□□□ -0.66
CHD9-219ENST00000569225 PATL2C9JE40 543 aaKnown RBP10.91□□□□□ -0.66
CHD9-219ENST00000569225 CDC45O75419 566 aa10.91□□□□□ -0.66
CHD9-219ENST00000569225 TDO2P48775 406 aa10.91□□□□□ -0.66
CHD9-219ENST00000569225 FMR1Q06787 632 aaKnown RBP eCLIP10.91□□□□□ -0.66
CHD9-219ENST00000569225 CST9Q5W186 159 aa10.91□□□□□ -0.66
CHD9-219ENST00000569225 CRACR2BQ8N4Y2 399 aaPredicted RBP10.91□□□□□ -0.66
CHD9-219ENST00000569225 ZNF341Q9BYN7 854 aa10.91□□□□□ -0.66
CHD9-219ENST00000569225 CREBZFQ9NS37 354 aa10.91□□□□□ -0.66
CHD9-219ENST00000569225 ARPP21Q9UBL0 812 aaPredicted RBP10.91□□□□□ -0.66
CHD9-219ENST00000569225 PALD1Q9ULE6 856 aa10.91□□□□□ -0.66
CHD9-219ENST00000569225 ABT1Q9ULW3 272 aaKnown RBP10.91□□□□□ -0.66
CHD9-219ENST00000569225 DDTLA6NHG4 134 aaPredicted RBP10.9□□□□□ -0.66
CHD9-219ENST00000569225 UNCXA6NJT0 531 aa10.9□□□□□ -0.66
CHD9-219ENST00000569225 GSG1L2A8MUP6 293 aa10.9□□□□□ -0.66
CHD9-219ENST00000569225 HSPA6P17066 643 aa10.9□□□□□ -0.66
CHD9-219ENST00000569225 CCDC129Q6ZRS4 1044 aa10.9□□□□□ -0.66
CHD9-219ENST00000569225 SH3BP5LQ7L8J4 393 aa10.9□□□□□ -0.66
CHD9-219ENST00000569225 FOXP4Q8IVH2 680 aaPredicted RBP10.9□□□□□ -0.66
CHD9-219ENST00000569225 CDAN1Q8IWY9 1227 aa10.9□□□□□ -0.66
CHD9-219ENST00000569225 EHD4Q9H223 541 aa10.9□□□□□ -0.66
CHD9-219ENST00000569225 MKRN1Q9UHC7 482 aaKnown RBP10.9□□□□□ -0.66
CHD9-219ENST00000569225 HERC5Q9UII4 1024 aaKnown RBP10.9□□□□□ -0.66
CHD9-219ENST00000569225 ECM29Q5VYK3 1845 aa10.9□□□□□ -0.66
CHD9-219ENST00000569225 TBC1D12O60347 775 aa10.89□□□□□ -0.67
CHD9-219ENST00000569225 PRKG1Q13976 671 aa10.89□□□□□ -0.67
CHD9-219ENST00000569225 NAPBQ9H115 298 aa10.89□□□□□ -0.67
CHD9-219ENST00000569225 ANGEL1Q9UNK9 670 aaKnown RBP10.89□□□□□ -0.67
CHD9-219ENST00000569225 HUNKP57058 714 aa10.89□□□□□ -0.67
CHD9-219ENST00000569225 MAP3K11Q16584 847 aa10.89□□□□□ -0.67
CHD9-219ENST00000569225 SBK1Q52WX2 424 aa10.89□□□□□ -0.67
CHD9-219ENST00000569225 KIAA1211Q6ZU35 1233 aa10.89□□□□□ -0.67
CHD9-219ENST00000569225 MIGA2Q7L4E1 593 aa10.89□□□□□ -0.67
CHD9-219ENST00000569225 ZNF589Q86UQ0 364 aaPredicted RBP10.89□□□□□ -0.67
CHD9-219ENST00000569225 IFNL3Q8IZI9 196 aa10.89□□□□□ -0.67
CHD9-219ENST00000569225 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.89□□□□□ -0.67
CHD9-219ENST00000569225 SERPINB13Q9UIV8 391 aa10.89□□□□□ -0.67
CHD9-219ENST00000569225 TLL2Q9Y6L7 1015 aa10.89□□□□□ -0.67
CHD9-219ENST00000569225 SSC5DA1L4H1 1573 aa10.88□□□□□ -0.67
CHD9-219ENST00000569225 MYO5AQ9Y4I1 1855 aaKnown RBP10.88□□□□□ -0.67
CHD9-219ENST00000569225 USP17L12C9JPN9 530 aa10.88□□□□□ -0.67
CHD9-219ENST00000569225 USP17L21D6R901 530 aa10.88□□□□□ -0.67
CHD9-219ENST00000569225 SGSM2O43147 1006 aa10.88□□□□□ -0.67
CHD9-219ENST00000569225 SLC3A2P08195 630 aaKnown RBP10.88□□□□□ -0.67
CHD9-219ENST00000569225 HSPD1P10809 573 aaKnown RBP10.88□□□□□ -0.67
CHD9-219ENST00000569225 MAP3K10Q02779 954 aa10.88□□□□□ -0.67
CHD9-219ENST00000569225 ALX1Q15699 326 aa10.88□□□□□ -0.67
CHD9-219ENST00000569225 SAPCD2Q86UD0 394 aa10.88□□□□□ -0.67
CHD9-219ENST00000569225 ANKRD13AQ8IZ07 590 aa10.88□□□□□ -0.67
CHD9-219ENST00000569225 WRNIP1Q96S55 665 aa10.88□□□□□ -0.67
CHD9-219ENST00000569225 CSADQ9Y600 493 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 370.5 ms